RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 CHADO15335 359 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 KRT37O76014 449 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 STAU1O95793 577 aaKnown RBP10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 SERPINA6P08185 405 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 VAV1P15498 845 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 ALOX15P16050 662 aaPredicted RBP10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 PORP16435 677 aaPredicted RBP10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 PSMA2P25787 234 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 CPA2P48052 419 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 EIF3EP60228 445 aaKnown RBP10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 DYNLT1P63172 113 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 XIAPP98170 497 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 BST1Q10588 318 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 KCNJ11Q14654 390 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 TMEM110Q86TL2 294 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 XYLT1Q86Y38 959 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 SLAIN1Q8ND83 568 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 SIKE1Q9BRV8 207 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 LHX5Q9H2C1 402 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 SNX25Q9H3E2 840 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 C10orf88Q9H8K7 445 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 SLC7A8Q9UHI5 535 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 TRIM49D1C9J1S8 452 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 CLDN5O00501 218 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 MCF2LO15068 1137 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 HUS1O60921 280 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 SNNO75324 88 aaPredicted RBP10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 LRCH4O75427 683 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 BASP1P80723 227 aaKnown RBP10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 WASHC5Q12768 1159 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 CDC16Q13042 620 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 SMTNL2Q2TAL5 461 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 KCNT1Q5JUK3 1230 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 SH3PXD2AQ5TCZ1 1133 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 OR6B2Q6IFH4 312 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 CDHR3Q6ZTQ4 885 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 ACAD11Q709F0 780 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 RTN4RL1Q86UN2 441 aaPredicted RBP10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 SPATA24Q86W54 205 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 CRLF3Q8IUI8 442 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 ADGRF2Q8IZF7 708 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 ARFGAP1Q8N6T3 406 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 CMASQ8NFW8 434 aaPredicted RBP10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 FBXO27Q8NI29 283 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 MTBPQ96DY7 904 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 ARPC5LQ9BPX5 153 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 THTPAQ9BU02 230 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 CHST12Q9NRB3 414 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 TTLL3Q9Y4R7 772 aa10.58□□□□□ -0.72
APOBEC3F-201ENST00000308521 MOXD2PA6NHM9 499 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 XPOTO43592 962 aaKnown RBP10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 AOC1P19801 751 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 IL1R2P27930 398 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 HOXD12P35452 270 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 ADARP55265 1226 aaKnown RBP10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 YWHAGP61981 247 aaKnown RBP eCLIP10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 TMPRSS15P98073 1019 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 PLOD1Q02809 727 aaPredicted RBP10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 GSTM4Q03013 218 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 FAM102AQ5T9C2 384 aaPredicted RBP10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 LCLAT1Q6UWP7 414 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 PRPF39Q86UA1 669 aaKnown RBP10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 CROCCP3Q8IVE0 287 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 FAM71DQ8N9W8 422 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 SLC2A14Q8TDB8 520 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 CLEC4CQ8WTT0 213 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 PCSK1NQ9UHG2 260 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 A0A0U1RQF3 1178 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 GABBR2O75899 941 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 CABYRO75952 493 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 RBP3P10745 1247 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 PRKCHP24723 683 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 NUBP1P53384 320 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 CDO1Q16878 200 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 MFSD4BQ5TF39 518 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 C1orf146Q5VVC0 180 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 PDSS2Q86YH6 399 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 RFX6Q8HWS3 928 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 NUDCD3Q8IVD9 361 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 ARID3BQ8IVW6 561 aaPredicted RBP10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 MAP7D3Q8IWC1 876 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 TET1Q8NFU7 2136 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 FAM172AQ8WUF8 416 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 NDRG1Q92597 394 aaKnown RBP10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 ITPKCQ96DU7 683 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 SENP8Q96LD8 212 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 ZNF560Q96MR9 790 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 LBHD1Q9BQE6 289 aaPredicted RBP10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 STN1Q9H668 368 aaKnown RBP10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 RSAD1Q9HA92 442 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 S100A14Q9HCY8 104 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 CROTQ9UKG9 612 aa10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 HBS1LQ9Y450 684 aaKnown RBP10.57□□□□□ -0.72
APOBEC3F-201ENST00000308521 A0A088AWK7 358 aa10.56□□□□□ -0.72
APOBEC3F-201ENST00000308521 SDR42E2A6NKP2 422 aa10.56□□□□□ -0.72
APOBEC3F-201ENST00000308521 RFPL1O75677 317 aa10.56□□□□□ -0.72
APOBEC3F-201ENST00000308521 B3GAT3O94766 335 aa10.56□□□□□ -0.72
APOBEC3F-201ENST00000308521 ITGB1P05556 798 aa10.56□□□□□ -0.72
APOBEC3F-201ENST00000308521 ZCCHC18P0CG32 403 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms