RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 GNSP15586 552 aa27.22■■□□□ 1.95
CDKN2A-201ENST00000304494 DAB2IPQ5VWQ8 1189 aa27.22■■□□□ 1.95
CDKN2A-201ENST00000304494 C14orf80Q86SX3 495 aa27.22■■□□□ 1.95
CDKN2A-201ENST00000304494 HAPLN3Q96S86 360 aa27.22■■□□□ 1.95
CDKN2A-201ENST00000304494 PCDHB18PQ96TA0 734 aa27.22■■□□□ 1.95
CDKN2A-201ENST00000304494 AGPAT1Q99943 283 aa27.22■■□□□ 1.95
CDKN2A-201ENST00000304494 ANLNQ9NQW6 1124 aa27.22■■□□□ 1.95
CDKN2A-201ENST00000304494 ADAM22Q9P0K1 906 aa27.22■■□□□ 1.95
CDKN2A-201ENST00000304494 MYO6Q9UM54 1294 aa27.22■■□□□ 1.95
CDKN2A-201ENST00000304494 CEP192Q8TEP8 1941 aa27.22■■□□□ 1.95
CDKN2A-201ENST00000304494 MED19A0JLT2 244 aaPredicted RBP27.21■■□□□ 1.95
CDKN2A-201ENST00000304494 C4orf47A7E2U8 309 aa27.21■■□□□ 1.95
CDKN2A-201ENST00000304494 TM4SF5O14894 197 aa27.21■■□□□ 1.95
CDKN2A-201ENST00000304494 SIN3BO75182 1162 aa27.21■■□□□ 1.95
CDKN2A-201ENST00000304494 CALB1P05937 261 aa27.21■■□□□ 1.95
CDKN2A-201ENST00000304494 MZF1P28698 734 aaPredicted RBP27.21■■□□□ 1.95
CDKN2A-201ENST00000304494 SDC4P31431 198 aa27.21■■□□□ 1.95
CDKN2A-201ENST00000304494 GSCP56915 257 aaPredicted RBP27.21■■□□□ 1.95
CDKN2A-201ENST00000304494 SFSWAPQ12872 951 aaKnown RBP27.21■■□□□ 1.95
CDKN2A-201ENST00000304494 FAM124AQ86V42 546 aa27.21■■□□□ 1.95
CDKN2A-201ENST00000304494 PHF13Q86YI8 300 aaPredicted RBP27.21■■□□□ 1.95
CDKN2A-201ENST00000304494 EMC1Q8N766 993 aa27.21■■□□□ 1.95
CDKN2A-201ENST00000304494 RPL10LQ96L21 214 aaKnown RBP27.21■■□□□ 1.95
CDKN2A-201ENST00000304494 MTG2Q9H4K7 406 aa27.21■■□□□ 1.95
CDKN2A-201ENST00000304494 TBC1D30Q9Y2I9 924 aa27.21■■□□□ 1.95
CDKN2A-201ENST00000304494 TTC34A8MYJ7 566 aa27.2■■□□□ 1.94
CDKN2A-201ENST00000304494 I6L893 689 aaPredicted RBP27.2■■□□□ 1.94
CDKN2A-201ENST00000304494 ENDOD1O94919 500 aa27.2■■□□□ 1.94
CDKN2A-201ENST00000304494 ENGP17813 658 aa27.2■■□□□ 1.94
CDKN2A-201ENST00000304494 IRAK1P51617 712 aa27.2■■□□□ 1.94
CDKN2A-201ENST00000304494 ATP11AP98196 1134 aa27.2■■□□□ 1.94
CDKN2A-201ENST00000304494 GFPT1Q06210 699 aaPredicted RBP27.2■■□□□ 1.94
CDKN2A-201ENST00000304494 PTP4A2Q12974 167 aa27.2■■□□□ 1.94
CDKN2A-201ENST00000304494 PPM1JQ5JR12 505 aa27.2■■□□□ 1.94
CDKN2A-201ENST00000304494 C9orf64Q5T6V5 341 aa27.2■■□□□ 1.94
CDKN2A-201ENST00000304494 LRSAM1Q6UWE0 723 aa27.2■■□□□ 1.94
CDKN2A-201ENST00000304494 RXFP2Q8WXD0 754 aa27.2■■□□□ 1.94
CDKN2A-201ENST00000304494 DNASE2BQ8WZ79 361 aa27.2■■□□□ 1.94
CDKN2A-201ENST00000304494 FEM1AQ9BSK4 669 aa27.2■■□□□ 1.94
CDKN2A-201ENST00000304494 SLCO3A1Q9UIG8 710 aa27.2■■□□□ 1.94
CDKN2A-201ENST00000304494 SLC25A13Q9UJS0 675 aa27.2■■□□□ 1.94
CDKN2A-201ENST00000304494 SYCE3A1L190 88 aa27.19■■□□□ 1.94
CDKN2A-201ENST00000304494 DRGXA6NNA5 263 aa27.19■■□□□ 1.94
CDKN2A-201ENST00000304494 METTL12A8MUP2 240 aa27.19■■□□□ 1.94
CDKN2A-201ENST00000304494 CDX4O14627 284 aaPredicted RBP27.19■■□□□ 1.94
CDKN2A-201ENST00000304494 KRT3P12035 628 aa27.19■■□□□ 1.94
CDKN2A-201ENST00000304494 VASPP50552 380 aaPredicted RBP27.19■■□□□ 1.94
CDKN2A-201ENST00000304494 TPM4P67936 248 aa27.19■■□□□ 1.94
CDKN2A-201ENST00000304494 IQCB1Q15051 598 aa27.19■■□□□ 1.94
CDKN2A-201ENST00000304494 DCAF12L1Q5VU92 463 aa27.19■■□□□ 1.94
CDKN2A-201ENST00000304494 PHLDB2Q86SQ0 1253 aa27.19■■□□□ 1.94
CDKN2A-201ENST00000304494 FAM131BQ86XD5 332 aa27.19■■□□□ 1.94
CDKN2A-201ENST00000304494 ZNF683Q8IZ20 524 aa27.19■■□□□ 1.94
CDKN2A-201ENST00000304494 SELENOOQ9BVL4 669 aa27.19■■□□□ 1.94
CDKN2A-201ENST00000304494 BTBD1Q9H0C5 482 aa27.19■■□□□ 1.94
CDKN2A-201ENST00000304494 CAPN10Q9HC96 672 aa27.19■■□□□ 1.94
CDKN2A-201ENST00000304494 VPS28Q9UK41 221 aa27.19■■□□□ 1.94
CDKN2A-201ENST00000304494 NCKAP1Q9Y2A7 1128 aa27.19■■□□□ 1.94
CDKN2A-201ENST00000304494 A0A1W2PQC6 194 aa27.18■■□□□ 1.94
CDKN2A-201ENST00000304494 C2CD4BA6NLJ0 364 aa27.18■■□□□ 1.94
CDKN2A-201ENST00000304494 E9PAM4 449 aa27.18■■□□□ 1.94
CDKN2A-201ENST00000304494 CNTN5O94779 1100 aa27.18■■□□□ 1.94
CDKN2A-201ENST00000304494 PTPN9P43378 593 aa27.18■■□□□ 1.94
CDKN2A-201ENST00000304494 STK19P49842 368 aaPredicted RBP27.18■■□□□ 1.94
CDKN2A-201ENST00000304494 ATXN3P54252 364 aaPredicted RBP27.18■■□□□ 1.94
CDKN2A-201ENST00000304494 ARL13BQ3SXY8 428 aa27.18■■□□□ 1.94
CDKN2A-201ENST00000304494 CCDC14Q49A88 953 aa27.18■■□□□ 1.94
CDKN2A-201ENST00000304494 USP30Q70CQ3 517 aa27.18■■□□□ 1.94
CDKN2A-201ENST00000304494 SETD3Q86TU7 594 aaPredicted RBP27.18■■□□□ 1.94
CDKN2A-201ENST00000304494 C3orf20Q8ND61 904 aa27.18■■□□□ 1.94
CDKN2A-201ENST00000304494 ALG14Q96F25 216 aa27.18■■□□□ 1.94
CDKN2A-201ENST00000304494 MUC3BQ9H195 1237 aa27.18■■□□□ 1.94
CDKN2A-201ENST00000304494 PABPC3Q9H361 631 aaKnown RBP27.18■■□□□ 1.94
CDKN2A-201ENST00000304494 SGK2Q9HBY8 427 aa27.18■■□□□ 1.94
CDKN2A-201ENST00000304494 OR51B4Q9Y5P0 310 aa27.18■■□□□ 1.94
CDKN2A-201ENST00000304494 SNX10Q9Y5X0 201 aa27.18■■□□□ 1.94
CDKN2A-201ENST00000304494 IGLV3-10A0A075B6K4 115 aa27.17■■□□□ 1.94
CDKN2A-201ENST00000304494 A0A1B0GTH6 734 aa27.17■■□□□ 1.94
CDKN2A-201ENST00000304494 SERPINC1P01008 464 aa27.17■■□□□ 1.94
CDKN2A-201ENST00000304494 RHOCP08134 193 aa27.17■■□□□ 1.94
CDKN2A-201ENST00000304494 SYPP08247 313 aa27.17■■□□□ 1.94
CDKN2A-201ENST00000304494 C1QBPQ07021 282 aaKnown RBP27.17■■□□□ 1.94
CDKN2A-201ENST00000304494 ELAVL3Q14576 367 aaKnown RBP27.17■■□□□ 1.94
CDKN2A-201ENST00000304494 CST6Q15828 149 aa27.17■■□□□ 1.94
CDKN2A-201ENST00000304494 CDO1Q16878 200 aa27.17■■□□□ 1.94
CDKN2A-201ENST00000304494 ALFQ53S48 1182 aa27.17■■□□□ 1.94
CDKN2A-201ENST00000304494 STRADAQ7RTN6 431 aa27.17■■□□□ 1.94
CDKN2A-201ENST00000304494 OR52K2Q8NGK3 314 aa27.17■■□□□ 1.94
CDKN2A-201ENST00000304494 JOSD2Q8TAC2 188 aa27.17■■□□□ 1.94
CDKN2A-201ENST00000304494 BAP1Q92560 729 aa27.17■■□□□ 1.94
CDKN2A-201ENST00000304494 TMPRSS4Q9NRS4 437 aa27.17■■□□□ 1.94
CDKN2A-201ENST00000304494 SEMA4FO95754 770 aa27.16■■□□□ 1.94
CDKN2A-201ENST00000304494 MAOBP27338 520 aa27.16■■□□□ 1.94
CDKN2A-201ENST00000304494 ACSL1P33121 698 aa27.16■■□□□ 1.94
CDKN2A-201ENST00000304494 MAPK8P45983 427 aa27.16■■□□□ 1.94
CDKN2A-201ENST00000304494 NUMBP49757 651 aa27.16■■□□□ 1.94
CDKN2A-201ENST00000304494 KRT83P78385 493 aa27.16■■□□□ 1.94
CDKN2A-201ENST00000304494 C15orf59Q2T9L4 293 aaPredicted RBP27.16■■□□□ 1.94
CDKN2A-201ENST00000304494 C6orf118Q5T5N4 469 aa27.16■■□□□ 1.94
CDKN2A-201ENST00000304494 PPP1R2P3Q6NXS1 205 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms