RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 GHRHRQ02643 423 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 INSCQ1MX18 579 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 ZNF699Q32M78 642 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 SLFN12LQ6IEE8 588 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 WDR49Q8IV35 697 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 TMA16Q96EY4 203 aaKnown RBP11.12□□□□□ -0.63
ZNF558-201ENST00000301475 ATXN7L3BQ96GX2 97 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 TWNKQ96RR1 684 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 RMDN3Q96TC7 470 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 XYLT2Q9H1B5 865 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 ARMC7Q9H6L4 198 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 SNX15Q9NRS6 342 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 SELENONQ9NZV5 590 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 NXF1Q9UBU9 619 aaKnown RBP11.12□□□□□ -0.63
ZNF558-201ENST00000301475 PSMD12O00232 456 aaPredicted RBP11.11□□□□□ -0.63
ZNF558-201ENST00000301475 ATE1O95260 518 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 TGM2P21980 687 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 CDH8P55286 799 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 TUBA4AP68366 448 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 GBE1Q04446 702 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 PDCD4Q53EL6 469 aaKnown RBP11.11□□□□□ -0.63
ZNF558-201ENST00000301475 MAMDC4Q6UXC1 1216 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 DCDC5Q6ZRR9 648 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 CYS1Q717R9 158 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 SLC15A3Q8IY34 581 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 DQX1Q8TE96 717 aaKnown RBP11.11□□□□□ -0.63
ZNF558-201ENST00000301475 RXFP2Q8WXD0 754 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 ARNTL2Q8WYA1 636 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 COX4I2Q96KJ9 171 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 NPAS2Q99743 824 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 ADPGKQ9BRR6 497 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 PXMP2Q9NR77 195 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 COQ6Q9Y2Z9 468 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 HES2Q9Y543 173 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 TCP10L2B9ZVM9 353 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 MATN2O00339 956 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 PRPSAP2O60256 369 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 RAD17O75943 681 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 BMP10O95393 424 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 CD247P20963 164 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 PPARGP37231 505 aaPredicted RBP11.11□□□□□ -0.63
ZNF558-201ENST00000301475 IRF9Q00978 393 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 DPYSQ14117 519 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 DCAF6Q58WW2 860 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 CES3Q6UWW8 571 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 ZBTB33Q86T24 672 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 MCF2L2Q86YR7 1114 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 FAM47BQ8NA70 645 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 RDM1Q8NG50 284 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 DEPTORQ8TB45 409 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 PPP1R10Q96QC0 940 aaKnown RBP11.11□□□□□ -0.63
ZNF558-201ENST00000301475 CIB1Q99828 191 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 CORO1BQ9BR76 489 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 CNPY3Q9BT09 278 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 GATA5Q9BWX5 397 aaPredicted RBP11.11□□□□□ -0.63
ZNF558-201ENST00000301475 PAIP1Q9H074 479 aaKnown RBP11.11□□□□□ -0.63
ZNF558-201ENST00000301475 PCDHAC1Q9H158 963 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 ZNF277Q9NRM2 450 aaPredicted RBP11.11□□□□□ -0.63
ZNF558-201ENST00000301475 TBC1D23Q9NUY8 699 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 DUS2Q9NX74 493 aaKnown RBP11.11□□□□□ -0.63
ZNF558-201ENST00000301475 BCAP29Q9UHQ4 241 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 SCAF8Q9UPN6 1271 aaKnown RBP11.11□□□□□ -0.63
ZNF558-201ENST00000301475 SCN4AP35499 1836 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 TRIP11Q15643 1979 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 C2CD4BA6NLJ0 364 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 C9IYK1 514 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 ERVK-10P10266 1014 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 ZFXP17010 805 aaPredicted RBP11.11□□□□□ -0.63
ZNF558-201ENST00000301475 GPD1P21695 349 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 MGAT1P26572 445 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 HOXD12P35452 270 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 ABCG1P45844 678 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 SESN2P58004 480 aaPredicted RBP11.11□□□□□ -0.63
ZNF558-201ENST00000301475 DGKZQ13574 1117 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 SEMA5AQ13591 1074 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 DLG2Q15700 870 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 OGFOD2Q6N063 350 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 DCLRE1AQ6PJP8 1040 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 PODNQ7Z5L7 613 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 GPR141Q7Z602 305 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 RNF169Q8NCN4 708 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 CDKL2Q92772 493 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 SLCO4A1Q96BD0 722 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 ZNF341Q9BYN7 854 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 CLK4Q9HAZ1 481 aaKnown RBP11.11□□□□□ -0.63
ZNF558-201ENST00000301475 CDH7Q9ULB5 785 aa11.11□□□□□ -0.63
ZNF558-201ENST00000301475 BPTFQ12830 3046 aa11.1□□□□□ -0.63
ZNF558-201ENST00000301475 TCAF2A6NFQ2 919 aa11.1□□□□□ -0.63
ZNF558-201ENST00000301475 H0YJX3 145 aa11.1□□□□□ -0.63
ZNF558-201ENST00000301475 K7EPI3 171 aa11.1□□□□□ -0.63
ZNF558-201ENST00000301475 HTRA2O43464 458 aaPredicted RBP11.1□□□□□ -0.63
ZNF558-201ENST00000301475 GCATO75600 419 aa11.1□□□□□ -0.63
ZNF558-201ENST00000301475 MICAL2O94851 1124 aa11.1□□□□□ -0.63
ZNF558-201ENST00000301475 GNAO1P09471 354 aa11.1□□□□□ -0.63
ZNF558-201ENST00000301475 PDGFRAP16234 1089 aa11.1□□□□□ -0.63
ZNF558-201ENST00000301475 KCNA2P16389 499 aa11.1□□□□□ -0.63
ZNF558-201ENST00000301475 ACADVLP49748 655 aa11.1□□□□□ -0.63
ZNF558-201ENST00000301475 TFAMQ00059 246 aaKnown RBP11.1□□□□□ -0.63
ZNF558-201ENST00000301475 ITGA7Q13683 1181 aa11.1□□□□□ -0.63
ZNF558-201ENST00000301475 STRIP1Q5VSL9 837 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms