RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 SERPINE1P05121 402 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ZNF37AP17032 561 aaPredicted RBP13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 BTG3Q14201 252 aaPredicted RBP13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CDKAL1Q5VV42 579 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ZNF75CPQ92670 426 aaPredicted RBP13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 GLIS2Q9BZE0 524 aaPredicted RBP13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 DDX4Q9NQI0 724 aaKnown RBP13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CD163L1Q9NR16 1453 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 RBAK-RBAKDNI3L0D1 243 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 C1DQ13901 141 aaKnown RBP13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CCDC153Q494R4 210 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ZNF618Q5T7W0 954 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 FAM45BPQ6NSW5 357 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 POLNQ7Z5Q5 900 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CDK20Q8IZL9 346 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 REPS2Q8NFH8 660 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 OR52K1Q8NGK4 314 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 RSPH1Q8WYR4 309 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 OSBPL6Q9BZF3 934 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 FHDC1Q9C0D6 1143 aaPredicted RBP13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 WDR41Q9HAD4 459 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 L1RE1Q9UN81 338 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ATXN2Q99700 1313 aaKnown RBP13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TMEM114B3SHH9 223 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PPP2R1BP30154 601 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CRATP43155 626 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SLC12A3P55017 1021 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 DGCR6Q14129 220 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ARMC4Q5T2S8 1044 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SDHAF4Q5VUM1 108 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ITIH5Q86UX2 942 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TRAPPC5Q8IUR0 188 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SYT12Q8IV01 421 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 FAM126BQ8IXS8 530 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 GPR152Q8TDT2 470 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PWWP2AQ96N64 755 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PSMD11O00231 422 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 DDX3XO00571 662 aaKnown RBP eCLIP13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PROCP04070 461 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 H2AFXP16104 143 aaPredicted RBP13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TALDO1P37837 337 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 RARRES1P49788 294 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TRIQKQ629K1 86 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 OTOP1Q7RTM1 612 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PAIP1Q9H074 479 aaKnown RBP13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 DNAJC18Q9H819 358 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CYP3A43Q9HB55 503 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 LRRC4BQ9NT99 713 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ZNF624Q9P2J8 865 aaPredicted RBP13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 KLHL3Q9UH77 587 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ADRA1DP25100 572 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CD86P42081 329 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 MRPS22P82650 360 aaKnown RBP13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 C1QBPQ07021 282 aaKnown RBP13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 DMPKQ09013 629 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PFKFB4Q16877 469 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 RAP1GAP2Q684P5 730 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 KCNK18Q7Z418 384 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TSEN2Q8NCE0 465 aaKnown RBP13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 P2RX7Q99572 595 aaKnown RBP13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 MTG1Q9BT17 334 aaPredicted RBP13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ULBP1Q9BZM6 244 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 FFAR3O14843 346 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 GPR42O15529 346 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 KRT6AP02538 564 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 KRT6BP04259 564 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 EIF2S1P05198 315 aaKnown RBP13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 OR56A5P0C7T3 313 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 COX7A2P14406 83 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 KRT6CP48668 564 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 HK2P52789 917 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CXCL9Q07325 125 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 MCL1Q07820 350 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 NAIF1Q69YI7 327 aaPredicted RBP13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TMC5Q6UXY8 1006 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CERKQ8TCT0 537 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CAVIN3Q969G5 261 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TOR4AQ9NXH8 423 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 INVSQ9Y283 1065 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TCRBV5S4A2TA0A5A2 114 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CNPP09543 421 aaKnown RBP13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 GP5P40197 560 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 MAGEA10P43363 369 aaPredicted RBP13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 BCL2L1Q07817 233 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PCSK9Q8NBP7 692 aaKnown RBP13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PHACTR1Q9C0D0 580 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 L2HGDHQ9H9P8 463 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 BTRCQ9Y297 605 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SLCO1B7G3V0H7 640 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 NTRK1P04629 796 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 VAV1P15498 845 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 HNF4AP41235 474 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ABL2P42684 1182 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ALKBH2Q6NS38 261 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ZCCHC8Q6NZY4 707 aaKnown RBP13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 HOXA2O43364 376 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CYP4F2P78329 520 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CYP4F3Q08477 520 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 DPYSL3Q14195 570 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ZIK1Q3SY52 487 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms