RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 PPP1R15BQ5SWA1 713 aa21.79■■□□□ 1.08
SMCO4-201ENST00000298966 NT5DC3Q86UY8 548 aa21.79■■□□□ 1.08
SMCO4-201ENST00000298966 RGL4Q8IZJ4 473 aa21.79■■□□□ 1.08
SMCO4-201ENST00000298966 HSPA12BQ96MM6 686 aa21.79■■□□□ 1.08
SMCO4-201ENST00000298966 TLR10Q9BXR5 811 aa21.79■■□□□ 1.08
SMCO4-201ENST00000298966 B3GNT5Q9BYG0 378 aa21.79■■□□□ 1.08
SMCO4-201ENST00000298966 CSNK1G1Q9HCP0 422 aa21.79■■□□□ 1.08
SMCO4-201ENST00000298966 DEC1Q9P2X7 70 aa21.79■■□□□ 1.08
SMCO4-201ENST00000298966 SUSD2Q9UGT4 822 aa21.79■■□□□ 1.08
SMCO4-201ENST00000298966 PLXNB3Q9ULL4 1909 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 E2F8A0AVK6 867 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 TMEM191CA6NGB0 347 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 F8VP50 259 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 SART1O43290 800 aaKnown RBP21.78■■□□□ 1.08
SMCO4-201ENST00000298966 CTIFO43310 598 aaKnown RBP21.78■■□□□ 1.08
SMCO4-201ENST00000298966 PROSCO94903 275 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 FBXO21O94952 628 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 ERBB2P04626 1255 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 KRT3P12035 628 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 NTSR1P30989 418 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 PMF1Q6P1K2 205 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 CCNI2Q6ZMN8 369 aaPredicted RBP21.78■■□□□ 1.08
SMCO4-201ENST00000298966 PAQR9Q6ZVX9 377 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 SLC41A1Q8IVJ1 513 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 NAXDQ8IW45 347 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 UBL4BQ8N7F7 174 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 CEP112Q8N8E3 955 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 NAT16Q8N8M0 369 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 NIPA2Q8N8Q9 360 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 HES6Q96HZ4 224 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 PBKQ96KB5 322 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 C8orf48Q96LL4 319 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 KRT82Q9NSB4 513 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 APOBEC2Q9Y235 224 aaKnown RBP21.78■■□□□ 1.08
SMCO4-201ENST00000298966 ALG6Q9Y672 507 aa21.78■■□□□ 1.08
SMCO4-201ENST00000298966 CCDC66A2RUB6 948 aa21.77■■□□□ 1.08
SMCO4-201ENST00000298966 E5RJQ4 531 aa21.77■■□□□ 1.08
SMCO4-201ENST00000298966 TULP3O75386 442 aa21.77■■□□□ 1.08
SMCO4-201ENST00000298966 WASP42768 502 aa21.77■■□□□ 1.08
SMCO4-201ENST00000298966 TUBB4BP68371 445 aa21.77■■□□□ 1.08
SMCO4-201ENST00000298966 CKAP4Q07065 602 aaKnown RBP21.77■■□□□ 1.08
SMCO4-201ENST00000298966 MESDQ14696 234 aa21.77■■□□□ 1.08
SMCO4-201ENST00000298966 CLEC20AQ6ZU45 233 aa21.77■■□□□ 1.08
SMCO4-201ENST00000298966 ETFBKMTQ8IXQ9 262 aa21.77■■□□□ 1.08
SMCO4-201ENST00000298966 SCML4Q8N228 414 aa21.77■■□□□ 1.08
SMCO4-201ENST00000298966 PNPLA1Q8N8W4 532 aa21.77■■□□□ 1.08
SMCO4-201ENST00000298966 MNS1Q8NEH6 495 aa21.77■■□□□ 1.08
SMCO4-201ENST00000298966 DMAP1Q9NPF5 467 aaPredicted RBP21.77■■□□□ 1.08
SMCO4-201ENST00000298966 ASNSD1Q9NWL6 643 aa21.77■■□□□ 1.08
SMCO4-201ENST00000298966 CYP8B1Q9UNU6 501 aa21.77■■□□□ 1.08
SMCO4-201ENST00000298966 SH3BP1Q9Y3L3 701 aa21.77■■□□□ 1.08
SMCO4-201ENST00000298966 UQCRHLA0A096LP55 91 aa21.76■■□□□ 1.07
SMCO4-201ENST00000298966 EIF4E1BA6NMX2 242 aaKnown RBP21.76■■□□□ 1.07
SMCO4-201ENST00000298966 HOXC11O43248 304 aaPredicted RBP21.76■■□□□ 1.07
SMCO4-201ENST00000298966 NDUFS2O75306 463 aa21.76■■□□□ 1.07
SMCO4-201ENST00000298966 GJB3O75712 270 aa21.76■■□□□ 1.07
SMCO4-201ENST00000298966 AP1G2O75843 785 aa21.76■■□□□ 1.07
SMCO4-201ENST00000298966 FTCDO95954 541 aa21.76■■□□□ 1.07
SMCO4-201ENST00000298966 UQCRHP07919 91 aa21.76■■□□□ 1.07
SMCO4-201ENST00000298966 GLI1P08151 1106 aa21.76■■□□□ 1.07
SMCO4-201ENST00000298966 GNSP15586 552 aa21.76■■□□□ 1.07
SMCO4-201ENST00000298966 CTNNA2P26232 953 aa21.76■■□□□ 1.07
SMCO4-201ENST00000298966 SLC6A3Q01959 620 aa21.76■■□□□ 1.07
SMCO4-201ENST00000298966 IFRD2Q12894 506 aaPredicted RBP21.76■■□□□ 1.07
SMCO4-201ENST00000298966 SYCP2LQ5T4T6 812 aa21.76■■□□□ 1.07
SMCO4-201ENST00000298966 SDE2Q6IQ49 451 aa21.76■■□□□ 1.07
SMCO4-201ENST00000298966 PIGZQ86VD9 579 aa21.76■■□□□ 1.07
SMCO4-201ENST00000298966 TERB1Q8NA31 727 aa21.76■■□□□ 1.07
SMCO4-201ENST00000298966 OSBPL9Q96SU4 736 aa21.76■■□□□ 1.07
SMCO4-201ENST00000298966 CARD6Q9BX69 1037 aa21.76■■□□□ 1.07
SMCO4-201ENST00000298966 LRRC4Q9HBW1 653 aa21.76■■□□□ 1.07
SMCO4-201ENST00000298966 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.76■■□□□ 1.07
SMCO4-201ENST00000298966 LAMA5O15230 3695 aa21.75■■□□□ 1.07
SMCO4-201ENST00000298966 SPOPO43791 374 aa21.75■■□□□ 1.07
SMCO4-201ENST00000298966 ANO4Q32M45 955 aa21.75■■□□□ 1.07
SMCO4-201ENST00000298966 EFHC1Q5JVL4 640 aa21.75■■□□□ 1.07
SMCO4-201ENST00000298966 OR6B2Q6IFH4 312 aa21.75■■□□□ 1.07
SMCO4-201ENST00000298966 SLC26A9Q7LBE3 791 aa21.75■■□□□ 1.07
SMCO4-201ENST00000298966 PDZD8Q8NEN9 1154 aa21.75■■□□□ 1.07
SMCO4-201ENST00000298966 HNRNPLLQ8WVV9 542 aaKnown RBP21.75■■□□□ 1.07
SMCO4-201ENST00000298966 TRIM62Q9BVG3 475 aa21.75■■□□□ 1.07
SMCO4-201ENST00000298966 CNGB3Q9NQW8 809 aa21.75■■□□□ 1.07
SMCO4-201ENST00000298966 PTPRBP23467 1997 aa21.74■■□□□ 1.07
SMCO4-201ENST00000298966 FLNBO75369 2602 aaKnown RBP21.74■■□□□ 1.07
SMCO4-201ENST00000298966 A0A1W2PQF6 199 aa21.74■■□□□ 1.07
SMCO4-201ENST00000298966 NDUFV2P19404 249 aa21.74■■□□□ 1.07
SMCO4-201ENST00000298966 COMTP21964 271 aa21.74■■□□□ 1.07
SMCO4-201ENST00000298966 YWHAQP27348 245 aa21.74■■□□□ 1.07
SMCO4-201ENST00000298966 C2CD6Q53TS8 623 aa21.74■■□□□ 1.07
SMCO4-201ENST00000298966 WDR45BQ5MNZ6 344 aa21.74■■□□□ 1.07
SMCO4-201ENST00000298966 FAM102AQ5T9C2 384 aaPredicted RBP21.74■■□□□ 1.07
SMCO4-201ENST00000298966 OLFML1Q6UWY5 402 aa21.74■■□□□ 1.07
SMCO4-201ENST00000298966 FAM183BPQ6ZVS7 135 aa21.74■■□□□ 1.07
SMCO4-201ENST00000298966 CHPFQ8IZ52 775 aa21.74■■□□□ 1.07
SMCO4-201ENST00000298966 MDM1Q8TC05 714 aa21.74■■□□□ 1.07
SMCO4-201ENST00000298966 FOXJ1Q92949 421 aa21.74■■□□□ 1.07
SMCO4-201ENST00000298966 ZNF419Q96HQ0 510 aaPredicted RBP21.74■■□□□ 1.07
SMCO4-201ENST00000298966 MCEEQ96PE7 176 aa21.74■■□□□ 1.07
SMCO4-201ENST00000298966 ZDHHC5Q9C0B5 715 aa21.74■■□□□ 1.07
SMCO4-201ENST00000298966 CARD9Q9H257 536 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms