RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 TMEM248Q9NWD8 314 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 RAB21Q9UL25 225 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.56■□□□□ 0.08
CCDC140-201ENST00000295226 H0Y626 953 aa15.56■□□□□ 0.08
CCDC140-201ENST00000295226 MFSD11O43934 449 aa15.56■□□□□ 0.08
CCDC140-201ENST00000295226 ADH5P11766 374 aa15.56■□□□□ 0.08
CCDC140-201ENST00000295226 PTPN7P35236 360 aa15.56■□□□□ 0.08
CCDC140-201ENST00000295226 CDH4P55283 916 aa15.56■□□□□ 0.08
CCDC140-201ENST00000295226 KLF1Q13351 362 aaPredicted RBP15.56■□□□□ 0.08
CCDC140-201ENST00000295226 ZNF177Q13360 481 aaPredicted RBP15.56■□□□□ 0.08
CCDC140-201ENST00000295226 RUNX3Q13761 415 aa15.56■□□□□ 0.08
CCDC140-201ENST00000295226 GAB4Q2WGN9 574 aa15.56■□□□□ 0.08
CCDC140-201ENST00000295226 CCDC181Q5TID7 509 aa15.56■□□□□ 0.08
CCDC140-201ENST00000295226 ASTLQ6HA08 431 aaPredicted RBP15.56■□□□□ 0.08
CCDC140-201ENST00000295226 C12orf40Q86WS4 652 aa15.56■□□□□ 0.08
CCDC140-201ENST00000295226 KRT222Q8N1A0 295 aa15.56■□□□□ 0.08
CCDC140-201ENST00000295226 PARD6BQ9BYG5 372 aa15.56■□□□□ 0.08
CCDC140-201ENST00000295226 NOL6Q9H6R4 1146 aaKnown RBP15.56■□□□□ 0.08
CCDC140-201ENST00000295226 FAM53CQ9NYF3 392 aa15.56■□□□□ 0.08
CCDC140-201ENST00000295226 RNF14Q9UBS8 474 aa15.56■□□□□ 0.08
CCDC140-201ENST00000295226 A0A0D9SEW6 157 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 A0A1B0GVM2 712 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 TYW5A2RUC4 315 aaKnown RBP15.55■□□□□ 0.08
CCDC140-201ENST00000295226 TCAF2A6NFQ2 919 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 ZNF487B1APH4 448 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 ARNTLO00327 626 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 FGF10O15520 208 aaPredicted RBP15.55■□□□□ 0.08
CCDC140-201ENST00000295226 TJP3O95049 919 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 LUC7L3O95232 432 aaKnown RBP15.55■□□□□ 0.08
CCDC140-201ENST00000295226 NFATC1O95644 943 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 PENKP01210 267 aaPredicted RBP15.55■□□□□ 0.08
CCDC140-201ENST00000295226 HTR7P34969 479 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 SLC6A11P48066 632 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 SOX9P48436 509 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 ZNF135P52742 658 aaPredicted RBP15.55■□□□□ 0.08
CCDC140-201ENST00000295226 ZP2Q05996 745 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 TFDP2Q14188 446 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 IER5LQ5T953 404 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 CXorf57Q6NSI4 855 aaKnown RBP15.55■□□□□ 0.08
CCDC140-201ENST00000295226 BBS12Q6ZW61 710 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 VSIG1Q86XK7 387 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 MFN1Q8IWA4 741 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 ADHFE1Q8IWW8 467 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 KIAA1958Q8N8K9 716 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 ATG4AQ8WYN0 398 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 SLC39A8Q9C0K1 460 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 C10orf88Q9H8K7 445 aa15.55■□□□□ 0.08
CCDC140-201ENST00000295226 WASH4PA8MWX3 477 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 PGRMC1O00264 195 aaKnown RBP15.54■□□□□ 0.08
CCDC140-201ENST00000295226 CES2O00748 559 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 CLDN11O75508 207 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 ADH1CP00326 375 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 BMP1P13497 986 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 MZF1P28698 734 aaPredicted RBP15.54■□□□□ 0.08
CCDC140-201ENST00000295226 ACVRL1P37023 503 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 MESP2Q0VG99 397 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 CDH18Q13634 790 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 PAFAH1B3Q15102 231 aaKnown RBP15.54■□□□□ 0.08
CCDC140-201ENST00000295226 SIX1Q15475 284 aaPredicted RBP15.54■□□□□ 0.08
CCDC140-201ENST00000295226 RNF219Q5W0B1 726 aaPredicted RBP15.54■□□□□ 0.08
CCDC140-201ENST00000295226 CCDC70Q6NSX1 233 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 ARHGAP36Q6ZRI8 547 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 CHST9Q7L1S5 443 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 ZNF572Q7Z3I7 529 aaPredicted RBP15.54■□□□□ 0.08
CCDC140-201ENST00000295226 ARHGAP12Q8IWW6 846 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 OR7D4Q8NG98 312 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 ACTRT1Q8TDG2 376 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 C1orf54Q8WWF1 131 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 RUBCNQ92622 972 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 DTLQ9NZJ0 730 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 IGSF9Q9P2J2 1179 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 EFR3BQ9Y2G0 817 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 TRIOO75962 3097 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 TICRRQ7Z2Z1 1910 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 TARSL2A2RTX5 802 aaKnown RBP15.54■□□□□ 0.08
CCDC140-201ENST00000295226 DFFAO00273 331 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 CD70P32970 193 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 OTUD4Q01804 1114 aaKnown RBP15.54■□□□□ 0.08
CCDC140-201ENST00000295226 GAD2Q05329 585 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 SNX1Q13596 522 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 MPP7Q5T2T1 576 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 TTC39BQ5VTQ0 682 aaPredicted RBP15.54■□□□□ 0.08
CCDC140-201ENST00000295226 CPA6Q8N4T0 437 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 ACTL9Q8TC94 416 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 CHFRQ96EP1 664 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 HMCESQ96FZ2 354 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 MARK1Q9P0L2 795 aa15.54■□□□□ 0.08
CCDC140-201ENST00000295226 HOXC11O43248 304 aaPredicted RBP15.53■□□□□ 0.08
CCDC140-201ENST00000295226 RHOCP08134 193 aa15.53■□□□□ 0.08
CCDC140-201ENST00000295226 HLA-FP30511 346 aa15.53■□□□□ 0.08
CCDC140-201ENST00000295226 GJA4P35212 333 aa15.53■□□□□ 0.08
CCDC140-201ENST00000295226 CSKP41240 450 aa15.53■□□□□ 0.08
CCDC140-201ENST00000295226 LMAN2Q12907 356 aa15.53■□□□□ 0.08
CCDC140-201ENST00000295226 ITPRIPL2Q3MIP1 535 aa15.53■□□□□ 0.08
CCDC140-201ENST00000295226 WDR93Q6P2C0 686 aa15.53■□□□□ 0.08
CCDC140-201ENST00000295226 LEKR1Q6ZMV7 388 aa15.53■□□□□ 0.08
CCDC140-201ENST00000295226 ZC3H18Q86VM9 953 aaKnown RBP15.53■□□□□ 0.08
CCDC140-201ENST00000295226 SFTPA1Q8IWL2 248 aa15.53■□□□□ 0.08
CCDC140-201ENST00000295226 APCDD1Q8J025 514 aa15.53■□□□□ 0.08
CCDC140-201ENST00000295226 P3H4Q92791 437 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms