RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 ZNF778Q96MU6 729 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 WWP1Q9H0M0 922 aa16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 C20orf96Q9NUD7 363 aaPredicted RBP16.17■□□□□ 0.18
NCKIPSD-201ENST00000294129 PRR5-ARHGAP8B1AHC4 643 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 GLRA3O75311 464 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 ITGB1P05556 798 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 ARHGAP8P85298 464 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 IRF9Q00978 393 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 VWA5B1Q5TIE3 1220 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 TEX9Q8N6V9 391 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 FAM161BQ96MY7 647 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 APBA2Q99767 749 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 EPAS1Q99814 870 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 FAM167BQ9BTA0 163 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 MLPHQ9BV36 600 aaPredicted RBP16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 SNX15Q9NRS6 342 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 PNPOQ9NVS9 261 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 CPSF2Q9P2I0 782 aaKnown RBP16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 IGSF9Q9P2J2 1179 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 SFMBT1Q9UHJ3 866 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 BPTFQ12830 3046 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 UNCXA6NJT0 531 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 MGEA5O60502 916 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 PLIN3O60664 434 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 AP2A1O95782 977 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 OR4Q2P0C623 313 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 GP5P40197 560 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 CACNB2Q08289 660 aaPredicted RBP16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 TRIM32Q13049 653 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 TAF11Q15544 211 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 CCDC6Q16204 474 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 C4orf50Q6ZRC1 276 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 BNIPLQ7Z465 357 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 POU5F2Q8N7G0 328 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 ACVR1CQ8NER5 493 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 WDR60Q8WVS4 1066 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 PPP1R36Q96LQ0 422 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 UNKQ9C0B0 810 aaKnown RBP16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 EIF2B3Q9NR50 452 aaKnown RBP16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 IARS2Q9NSE4 1012 aaKnown RBP16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 THAP1Q9NVV9 213 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 CDH9Q9ULB4 789 aa16.16■□□□□ 0.18
NCKIPSD-201ENST00000294129 TRAFD1O14545 582 aaPredicted RBP16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 GSRP00390 522 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 TPBGLP0DKB5 382 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 FGF3P11487 239 aaPredicted RBP16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 CTGFP29279 349 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 PGM1P36871 562 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 GARSP41250 739 aaKnown RBP16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 PCLAFQ15004 111 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 KYAT3Q6YP21 454 aaKnown RBP16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 RTP3Q9BQQ7 232 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 OXCT2Q9BYC2 517 aaPredicted RBP16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 ARHGAP39Q9C0H5 1083 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 LRRC40Q9H9A6 602 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 PADI3Q9ULW8 664 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 HHLA1C9JL84 531 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 DNAJC6O75061 913 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 KRT36O76013 467 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 MT-CYBP00156 380 aaPredicted RBP16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 CNTFP26441 200 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 PCSK1P29120 753 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 PGFP49763 221 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 RCN1Q15293 331 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 UPP1Q16831 310 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 MBLAC2Q68D91 279 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 ATG14Q6ZNE5 492 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 LRRTM3Q86VH5 581 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 SPNS2Q8IVW8 549 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 TMEM86AQ8N2M4 240 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 MTG1Q9BT17 334 aaPredicted RBP16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 MKS1Q9NXB0 559 aa16.15■□□□□ 0.18
NCKIPSD-201ENST00000294129 SNNO75324 88 aaPredicted RBP16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 PPIDQ08752 370 aaKnown RBP16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 ANKRD20A4Q4UJ75 823 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 SDHAF4Q5VUM1 108 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 FSTL4Q6MZW2 842 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 WDR75Q8IWA0 830 aaKnown RBP16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 OR10T2Q8NGX3 314 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 ATXN3LQ9H3M9 355 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 ODC1P11926 461 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 NMBRP28336 390 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 AVPR1AP37288 418 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 SEMA3BQ13214 749 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 TEDDM1Q5T9Z0 273 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 TIFABQ6ZNK6 161 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 BHLHA9Q7RTU4 235 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 SCN4BQ8IWT1 228 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 RBM15BQ8NDT2 890 aaKnown RBP16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 IPMKQ8NFU5 416 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 DQX1Q8TE96 717 aaKnown RBP16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 APBB2Q92870 758 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 NTAN1Q96AB6 310 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 NAT9Q9BTE0 207 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 THTPAQ9BU02 230 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 SENP6Q9GZR1 1112 aaPredicted RBP16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 BIRC5O15392 142 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 NEBLO76041 1014 aa16.14■□□□□ 0.17
NCKIPSD-201ENST00000294129 ARRB2P32121 409 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms