RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 SLC4A5Q9BY07 1137 aa15.04■□□□□ -0
CCNF-201ENST00000293968 VPS33BQ9H267 617 aa15.04■□□□□ -0
CCNF-201ENST00000293968 GTSE1Q9NYZ3 720 aa15.04■□□□□ -0
CCNF-201ENST00000293968 FAF1Q9UNN5 650 aaPredicted RBP15.04■□□□□ -0
CCNF-201ENST00000293968 ARHGAP10A1A4S6 786 aa15.03■□□□□ -0
CCNF-201ENST00000293968 TK2O00142 265 aa15.03■□□□□ -0
CCNF-201ENST00000293968 GALK1P51570 392 aa15.03■□□□□ -0
CCNF-201ENST00000293968 INHBCP55103 352 aa15.03■□□□□ -0
CCNF-201ENST00000293968 LSM12Q3MHD2 195 aaKnown RBP15.03■□□□□ -0
CCNF-201ENST00000293968 TBC1D25Q3MII6 688 aa15.03■□□□□ -0
CCNF-201ENST00000293968 OLFML1Q6UWY5 402 aa15.03■□□□□ -0
CCNF-201ENST00000293968 RTP4Q96DX8 246 aa15.03■□□□□ -0
CCNF-201ENST00000293968 BTBD9Q96Q07 612 aa15.03■□□□□ -0
CCNF-201ENST00000293968 GATA5Q9BWX5 397 aaPredicted RBP15.03■□□□□ -0
CCNF-201ENST00000293968 C6orf203Q9P0P8 240 aaPredicted RBP15.03■□□□□ -0
CCNF-201ENST00000293968 PCDHB12Q9Y5F1 795 aa15.03■□□□□ -0
CCNF-201ENST00000293968 SPDYE16A6NNV3 312 aaPredicted RBP15.03■□□□□ -0
CCNF-201ENST00000293968 IQCF3P0C7M6 154 aa15.03■□□□□ -0
CCNF-201ENST00000293968 IL31Q6EBC2 164 aa15.03■□□□□ -0
CCNF-201ENST00000293968 FSTL4Q6MZW2 842 aa15.03■□□□□ -0
CCNF-201ENST00000293968 METTL7BQ6UX53 244 aa15.03■□□□□ -0
CCNF-201ENST00000293968 MICALL2Q8IY33 904 aa15.03■□□□□ -0
CCNF-201ENST00000293968 STK39Q9UEW8 545 aa15.03■□□□□ -0
CCNF-201ENST00000293968 CCDC153Q494R4 210 aa15.03■□□□□ -0
CCNF-201ENST00000293968 REPS2Q8NFH8 660 aa15.03■□□□□ -0
CCNF-201ENST00000293968 PKP2Q99959 881 aa15.03■□□□□ -0
CCNF-201ENST00000293968 LIN28AQ9H9Z2 209 aaKnown RBP15.03■□□□□ -0
CCNF-201ENST00000293968 MRPL42Q9Y6G3 142 aaKnown RBP15.03■□□□□ -0
CCNF-201ENST00000293968 DOCK5Q9H7D0 1870 aa15.03■□□□□ -0
CCNF-201ENST00000293968 H3BSA7 217 aa15.03■□□□□ -0
CCNF-201ENST00000293968 MT-CO1P00395 513 aa15.03■□□□□ -0
CCNF-201ENST00000293968 SNX16P57768 344 aa15.03■□□□□ -0
CCNF-201ENST00000293968 USP10Q14694 798 aaKnown RBP15.03■□□□□ -0
CCNF-201ENST00000293968 MYLK3Q32MK0 819 aa15.03■□□□□ -0
CCNF-201ENST00000293968 EPGNQ6UW88 154 aa15.03■□□□□ -0
CCNF-201ENST00000293968 CYP2R1Q6VVX0 501 aa15.03■□□□□ -0
CCNF-201ENST00000293968 TP53INP2Q8IXH6 220 aa15.03■□□□□ -0
CCNF-201ENST00000293968 SNX31Q8N9S9 440 aa15.03■□□□□ -0
CCNF-201ENST00000293968 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.03■□□□□ -0
CCNF-201ENST00000293968 MFSD3Q96ES6 412 aa15.03■□□□□ -0
CCNF-201ENST00000293968 PRDM12Q9H4Q4 367 aa15.03■□□□□ -0
CCNF-201ENST00000293968 EPS15L1Q9UBC2 864 aa15.03■□□□□ -0
CCNF-201ENST00000293968 CDYLQ9Y232 598 aa15.03■□□□□ -0
CCNF-201ENST00000293968 RGSL1A5PLK6 1076 aa15.02■□□□□ -0
CCNF-201ENST00000293968 C2P06681 752 aa15.02■□□□□ -0
CCNF-201ENST00000293968 GRIA4P48058 902 aa15.02■□□□□ -0
CCNF-201ENST00000293968 LRRC8BQ6P9F7 803 aa15.02■□□□□ -0
CCNF-201ENST00000293968 ZFP28Q8NHY6 868 aa15.02■□□□□ -0
CCNF-201ENST00000293968 CPNE1Q99829 537 aa15.02■□□□□ -0
CCNF-201ENST00000293968 OMDQ99983 421 aa15.02■□□□□ -0
CCNF-201ENST00000293968 MORF4L1Q9UBU8 362 aa15.02■□□□□ -0
CCNF-201ENST00000293968 SNX13Q9Y5W8 968 aa15.02■□□□□ -0
CCNF-201ENST00000293968 TFAP2AP05549 437 aa15.02□□□□□ -0.01
CCNF-201ENST00000293968 PSMC3P17980 439 aa15.02□□□□□ -0.01
CCNF-201ENST00000293968 ME2P23368 584 aa15.02□□□□□ -0.01
CCNF-201ENST00000293968 NR2C2P49116 596 aa15.02□□□□□ -0.01
CCNF-201ENST00000293968 NIPAL4Q0D2K0 466 aa15.02□□□□□ -0.01
CCNF-201ENST00000293968 SLC10A6Q3KNW5 377 aa15.02□□□□□ -0.01
CCNF-201ENST00000293968 GRTP1Q5TC63 336 aa15.02□□□□□ -0.01
CCNF-201ENST00000293968 NCBP2-AS2Q69YL0 99 aa15.02□□□□□ -0.01
CCNF-201ENST00000293968 RNF135Q8IUD6 432 aa15.02□□□□□ -0.01
CCNF-201ENST00000293968 FBXO16Q8IX29 292 aaPredicted RBP15.02□□□□□ -0.01
CCNF-201ENST00000293968 URGCPQ8TCY9 931 aa15.02□□□□□ -0.01
CCNF-201ENST00000293968 DPEP3Q9H4B8 488 aa15.02□□□□□ -0.01
CCNF-201ENST00000293968 PTTG2Q9NZH5 202 aa15.02□□□□□ -0.01
CCNF-201ENST00000293968 VANGL2Q9ULK5 521 aa15.02□□□□□ -0.01
CCNF-201ENST00000293968 TNFSF13BQ9Y275 285 aa15.02□□□□□ -0.01
CCNF-201ENST00000293968 LY75O60449 1722 aa15.02□□□□□ -0.01
CCNF-201ENST00000293968 MDM4O15151 490 aa15.02□□□□□ -0.01
CCNF-201ENST00000293968 HNRNPCP07910 306 aaKnown RBP eCLIP15.02□□□□□ -0.01
CCNF-201ENST00000293968 OAZ1P54368 228 aa15.02□□□□□ -0.01
CCNF-201ENST00000293968 SNAPC2Q13487 334 aa15.02□□□□□ -0.01
CCNF-201ENST00000293968 OGFRL1Q5TC84 451 aaPredicted RBP15.02□□□□□ -0.01
CCNF-201ENST00000293968 PDCD6IPQ8WUM4 868 aaKnown RBP15.02□□□□□ -0.01
CCNF-201ENST00000293968 PRICKLE1Q96MT3 831 aaPredicted RBP15.02□□□□□ -0.01
CCNF-201ENST00000293968 FCRL3Q96P31 734 aaPredicted RBP15.02□□□□□ -0.01
CCNF-201ENST00000293968 SUDS3Q9H7L9 328 aaPredicted RBP15.02□□□□□ -0.01
CCNF-201ENST00000293968 PGAP2Q9UHJ9 254 aa15.02□□□□□ -0.01
CCNF-201ENST00000293968 RUVBL2Q9Y230 463 aaKnown RBP15.02□□□□□ -0.01
CCNF-201ENST00000293968 STRNO43815 780 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 PFKMP08237 780 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 DPEP1P16444 411 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 MS4A2Q01362 244 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 MBTD1Q05BQ5 628 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 TMEM62Q0P6H9 643 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 MPP3Q13368 585 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 ADGRE1Q14246 886 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 PTK2BQ14289 1009 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 SOWAHAQ2M3V2 549 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 CERCAMQ5T4B2 595 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 GADL1Q6ZQY3 521 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 CATSPERGQ6ZRH7 1159 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 KDELC2Q7Z4H8 507 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 METTL25Q8N6Q8 603 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 NCSTNQ92542 709 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 LMCD1Q9NZU5 365 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 TMCO1Q9UM00 188 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.01□□□□□ -0.01
CCNF-201ENST00000293968 PPEF2O14830 753 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 SEC24DO94855 1032 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms