RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 DTNAQ9Y4J8 743 aa13.54□□□□□ -0.24
SLC28A1-201ENST00000286749 SHROOM3Q8TF72 1996 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 NEMP1O14524 444 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 LTFP02788 710 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 ZNF286BP0CG31 522 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 CYP2C8P10632 490 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 GRM5P41594 1212 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 ALDH1A3P47895 512 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 RPS6KA3P51812 740 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 CHN2P52757 468 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 LIMK2P53671 638 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 PDK1Q15118 436 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 PPM1LQ5SGD2 360 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 OGFRL1Q5TC84 451 aaPredicted RBP13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 UGT2A3Q6UWM9 527 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 PID1Q7Z2X4 250 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 ISL2Q96A47 359 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 FERMT1Q9BQL6 677 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 WDR55Q9H6Y2 383 aaPredicted RBP13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 VCX3AQ9NNX9 186 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 G3BP2Q9UN86 482 aaKnown RBP13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 SLC4A7Q9Y6M7 1214 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 OTOFQ9HC10 1997 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 C15orf38-AP3S2A0A0A6YYH1 394 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 PEX1O43933 1283 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 ACAT1P24752 427 aaKnown RBP13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 MPSTP25325 297 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 LMO2P25791 158 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 MATKP42679 507 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 TTLL4Q14679 1199 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 KCTD2Q14681 263 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 ARPINQ7Z6K5 226 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 UNC93AQ86WB7 457 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 SNX32Q86XE0 403 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 NAT14Q8WUY8 206 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 HAPLN3Q96S86 360 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 LRRC40Q9H9A6 602 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 KLHL8Q9P2G9 620 aaPredicted RBP13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 RCOR3Q9P2K3 495 aaPredicted RBP13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 SCN4AP35499 1836 aa13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 BRCA1P38398 1863 aaKnown RBP13.53□□□□□ -0.24
SLC28A1-201ENST00000286749 UTRNP46939 3433 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 KPNA7A9QM74 516 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 TMEM114B3SHH9 223 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 FZD9O00144 591 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 OR6B1O95007 311 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 PGM3O95394 542 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 CHRNGP07510 517 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 GLDCP23378 1020 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 PIK3R1P27986 724 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 SCNN1AP37088 669 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 ARHGAP1Q07960 439 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 Q3C1V9 767 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 SLC25A52Q3SY17 297 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 HSP90AA5PQ58FG0 334 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 DCAF6Q58WW2 860 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 ISLR2Q6UXK2 745 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 TMC7Q7Z402 723 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 PQLC1Q8N2U9 271 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 ACVR1CQ8NER5 493 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 URGCPQ8TCY9 931 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 SLC2A14Q8TDB8 520 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 DCUN1D1Q96GG9 259 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 BTBD9Q96Q07 612 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 GATA5Q9BWX5 397 aaPredicted RBP13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 IGSF9Q9P2J2 1179 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 PSMD13Q9UNM6 376 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 HES2Q9Y543 173 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 COMMD3-BMI1R4GMX3 469 aa13.52□□□□□ -0.24
SLC28A1-201ENST00000286749 DNAJC25-GNG10A0A024R161 153 aa13.52□□□□□ -0.25
SLC28A1-201ENST00000286749 TRIM13O60858 407 aa13.52□□□□□ -0.25
SLC28A1-201ENST00000286749 CCR10P46092 362 aa13.52□□□□□ -0.25
SLC28A1-201ENST00000286749 TLR1Q15399 786 aa13.52□□□□□ -0.25
SLC28A1-201ENST00000286749 OTUD1Q5VV17 481 aaPredicted RBP13.52□□□□□ -0.25
SLC28A1-201ENST00000286749 CLEC14AQ86T13 490 aa13.52□□□□□ -0.25
SLC28A1-201ENST00000286749 DNAAF3Q8N9W5 541 aa13.52□□□□□ -0.25
SLC28A1-201ENST00000286749 KBTBD7Q8WVZ9 684 aa13.52□□□□□ -0.25
SLC28A1-201ENST00000286749 NMRAL1Q9HBL8 299 aa13.52□□□□□ -0.25
SLC28A1-201ENST00000286749 STK39Q9UEW8 545 aa13.52□□□□□ -0.25
SLC28A1-201ENST00000286749 VANGL2Q9ULK5 521 aa13.52□□□□□ -0.25
SLC28A1-201ENST00000286749 ZCWPW2A0A1B0GU75 182 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 FBXO21O94952 628 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 SLC25A27O95847 323 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 MPOP05164 745 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 C2P06681 752 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 RPL34P49207 117 aaKnown RBP13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 NUMBP49757 651 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 ADIGQ0VDE8 80 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 SNAPC2Q13487 334 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 ZNF618Q5T7W0 954 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 METTL21CQ5VZV1 264 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 SREK1Q8WXA9 508 aaKnown RBP13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 MFSD3Q96ES6 412 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 SNX27Q96L92 541 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 NDNQ99608 321 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 GJD2Q9UKL4 321 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 GINS2Q9Y248 185 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 SBF1O95248 1867 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms