RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 CNPP09543 421 aaKnown RBP12.42□□□□□ -0.42
SDE2-201ENST00000272091 CSH1P0DML2 217 aa12.42□□□□□ -0.42
SDE2-201ENST00000272091 CSH2P0DML3 217 aa12.42□□□□□ -0.42
SDE2-201ENST00000272091 CTSAP10619 480 aa12.42□□□□□ -0.42
SDE2-201ENST00000272091 TSHRP16473 764 aa12.42□□□□□ -0.42
SDE2-201ENST00000272091 CCNCP24863 283 aa12.42□□□□□ -0.42
SDE2-201ENST00000272091 SPARCL1Q14515 664 aa12.42□□□□□ -0.42
SDE2-201ENST00000272091 TEX44Q53QW1 395 aa12.42□□□□□ -0.42
SDE2-201ENST00000272091 FAM133BQ5BKY9 247 aaKnown RBP12.42□□□□□ -0.42
SDE2-201ENST00000272091 PID1Q7Z2X4 250 aa12.42□□□□□ -0.42
SDE2-201ENST00000272091 PRPF39Q86UA1 669 aaKnown RBP12.42□□□□□ -0.42
SDE2-201ENST00000272091 KLHDC8BQ8IXV7 354 aa12.42□□□□□ -0.42
SDE2-201ENST00000272091 MDM1Q8TC05 714 aa12.42□□□□□ -0.42
SDE2-201ENST00000272091 FRMD8Q9BZ67 464 aaPredicted RBP12.42□□□□□ -0.42
SDE2-201ENST00000272091 TMEM51Q9NW97 253 aa12.42□□□□□ -0.42
SDE2-201ENST00000272091 TBK1Q9UHD2 729 aa12.42□□□□□ -0.42
SDE2-201ENST00000272091 OAS1P00973 400 aaKnown RBP12.41□□□□□ -0.42
SDE2-201ENST00000272091 PPM1AP35813 382 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 TFAP2DQ7Z6R9 452 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 FIBCD1Q8N539 461 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 TEKT5Q96M29 485 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 ZNF512Q96ME7 567 aaPredicted RBP12.41□□□□□ -0.42
SDE2-201ENST00000272091 AGAP3Q96P47 875 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 KLHL8Q9P2G9 620 aaPredicted RBP12.41□□□□□ -0.42
SDE2-201ENST00000272091 DNMT3LQ9UJW3 386 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 GBF1Q92538 1859 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 TCRBV9S1A1TA0A576 114 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 CACNG3O60359 315 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 STK10O94804 968 aaKnown RBP12.41□□□□□ -0.42
SDE2-201ENST00000272091 RHOQP17081 205 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 NFKB1P19838 968 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 MDH1P40925 334 aaKnown RBP12.41□□□□□ -0.42
SDE2-201ENST00000272091 PAPOLAP51003 745 aaKnown RBP12.41□□□□□ -0.42
SDE2-201ENST00000272091 ZNF33AQ06730 810 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 LRRC8BQ6P9F7 803 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 UMODL1-AS1Q8N2C9 162 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 PDZD8Q8NEN9 1154 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 ARNTL2Q8WYA1 636 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 ZYG11BQ9C0D3 744 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 IL21Q9HBE4 155 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 HBS1LQ9Y450 684 aaKnown RBP12.41□□□□□ -0.42
SDE2-201ENST00000272091 CDH16O75309 829 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 JCHAINP01591 159 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 KLKB1P03952 638 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 GNGT1P63211 74 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 KLHDC10Q6PID8 442 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 GPR65Q8IYL9 337 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 LZTR1Q8N653 840 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 USP33Q8TEY7 942 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 MZB1Q8WU39 189 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 CFAP36Q96G28 342 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 ZFRQ96KR1 1074 aaKnown RBP12.41□□□□□ -0.42
SDE2-201ENST00000272091 IL12RB2Q99665 862 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 PCDHB12Q9Y5F1 795 aa12.41□□□□□ -0.42
SDE2-201ENST00000272091 POC1B-GALNT4F8VUJ3 575 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 TGM5O43548 720 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 SUN1O94901 812 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 DNAJB1P25685 340 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 ATP5C1P36542 298 aaKnown RBP12.4□□□□□ -0.42
SDE2-201ENST00000272091 ALDH1A3P47895 512 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 C5orf22Q49AR2 442 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 UNC5AQ6ZN44 842 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 OTOP3Q7RTS5 596 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 DNAJB7Q7Z6W7 309 aaPredicted RBP12.4□□□□□ -0.42
SDE2-201ENST00000272091 PALM2Q8IXS6 379 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 C7orf61Q8IZ16 206 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 ATPAF2Q8N5M1 289 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 DCAKDQ8WVC6 231 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 OXNAD1Q96HP4 312 aaPredicted RBP12.4□□□□□ -0.42
SDE2-201ENST00000272091 SMYD2Q9NRG4 433 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 ARHGEF15O94989 841 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 SYN1P17600 705 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 TACR2P21452 398 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 CRADDP78560 199 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 HECTD3Q5T447 861 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 HERC6Q8IVU3 1022 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 ARHGEF2Q92974 986 aaKnown RBP12.4□□□□□ -0.42
SDE2-201ENST00000272091 PSMG2Q969U7 264 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 HMCESQ96FZ2 354 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 GKN1Q9NS71 199 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 ATG2AQ2TAZ0 1938 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 F11P03951 625 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 SGSHP51688 502 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 ERVFC1P60507 584 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 CDK16Q00536 496 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 MPP2Q14168 576 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 TMED2Q15363 201 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 LILRA6Q6PI73 481 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 HERVK_113Q902F9 699 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 PRICKLE1Q96MT3 831 aaPredicted RBP12.4□□□□□ -0.42
SDE2-201ENST00000272091 SLC22A12Q96S37 553 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 EBNA1BP2Q99848 306 aaKnown RBP12.4□□□□□ -0.42
SDE2-201ENST00000272091 KLF16Q9BXK1 252 aaPredicted RBP12.4□□□□□ -0.42
SDE2-201ENST00000272091 XAB2Q9HCS7 855 aaKnown RBP12.4□□□□□ -0.42
SDE2-201ENST00000272091 FETUBQ9UGM5 382 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 RSPH14Q9UHP6 348 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 TRHDEQ9UKU6 1024 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 INSL6Q9Y581 213 aa12.4□□□□□ -0.42
SDE2-201ENST00000272091 MTCL1Q9Y4B5 1905 aaKnown RBP12.39□□□□□ -0.43
SDE2-201ENST00000272091 PRRG1O14668 218 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms