RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 SULT1E1P49888 294 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 MTAPQ13126 283 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 PTK6Q13882 451 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 EML3Q32P44 896 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 BEND5Q7L4P6 421 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 LTFP02788 710 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 FAM153BP0C7A2 387 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 BYSLQ13895 437 aaKnown RBP25.36■■□□□ 1.65
SSBP4-201ENST00000270061 TFDP2Q14188 446 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 PPP1R7Q15435 360 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 DPYSL2Q16555 572 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 FAM153CQ494X1 144 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 OTUD1Q5VV17 481 aaPredicted RBP25.36■■□□□ 1.65
SSBP4-201ENST00000270061 MAML2Q8IZL2 1156 aaPredicted RBP25.36■■□□□ 1.65
SSBP4-201ENST00000270061 KIAA1958Q8N8K9 716 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 SLC35B2Q8TB61 432 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 CALN1Q9BXU9 219 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 NACA2Q9H009 215 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 LINC00597Q9H2U6 94 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 PCDH18Q9HCL0 1135 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 FAM153AQ9UHL3 310 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 FBXO4Q9UKT5 387 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 SP9P0CG40 484 aa25.35■■□□□ 1.65
SSBP4-201ENST00000270061 IL4RP24394 825 aa25.35■■□□□ 1.65
SSBP4-201ENST00000270061 RPL21P46778 160 aaKnown RBP25.35■■□□□ 1.65
SSBP4-201ENST00000270061 KRT81Q14533 505 aa25.35■■□□□ 1.65
SSBP4-201ENST00000270061 OASLQ15646 514 aaKnown RBP25.35■■□□□ 1.65
SSBP4-201ENST00000270061 DGKKQ5KSL6 1271 aa25.35■■□□□ 1.65
SSBP4-201ENST00000270061 FAF2Q96CS3 445 aa25.35■■□□□ 1.65
SSBP4-201ENST00000270061 PGAP3Q96FM1 320 aaPredicted RBP25.35■■□□□ 1.65
SSBP4-201ENST00000270061 RNF157Q96PX1 679 aa25.35■■□□□ 1.65
SSBP4-201ENST00000270061 ZNF670Q9BS34 389 aa25.35■■□□□ 1.65
SSBP4-201ENST00000270061 TRIM62Q9BVG3 475 aa25.35■■□□□ 1.65
SSBP4-201ENST00000270061 MAK16Q9BXY0 300 aaKnown RBP25.35■■□□□ 1.65
SSBP4-201ENST00000270061 TRIM31Q9BZY9 425 aa25.35■■□□□ 1.65
SSBP4-201ENST00000270061 NEUROG2Q9H2A3 272 aa25.35■■□□□ 1.65
SSBP4-201ENST00000270061 ZDHHC18Q9NUE0 388 aa25.35■■□□□ 1.65
SSBP4-201ENST00000270061 GRHL1Q9NZI5 618 aa25.35■■□□□ 1.65
SSBP4-201ENST00000270061 CFAP97Q9P2B7 532 aa25.35■■□□□ 1.65
SSBP4-201ENST00000270061 DNPEPQ9ULA0 475 aa25.35■■□□□ 1.65
SSBP4-201ENST00000270061 SNX24Q9Y343 169 aa25.35■■□□□ 1.65
SSBP4-201ENST00000270061 APOC4-APOC2K7ER74 178 aa25.34■■□□□ 1.65
SSBP4-201ENST00000270061 TLR5O60602 858 aa25.34■■□□□ 1.65
SSBP4-201ENST00000270061 APOC2P02655 101 aa25.34■■□□□ 1.65
SSBP4-201ENST00000270061 GJA4P35212 333 aa25.34■■□□□ 1.65
SSBP4-201ENST00000270061 RDXP35241 583 aaKnown RBP25.34■■□□□ 1.65
SSBP4-201ENST00000270061 PGFP49763 221 aa25.34■■□□□ 1.65
SSBP4-201ENST00000270061 NR1H3Q13133 447 aa25.34■■□□□ 1.65
SSBP4-201ENST00000270061 SYPL2Q5VXT5 272 aa25.34■■□□□ 1.65
SSBP4-201ENST00000270061 RFX6Q8HWS3 928 aa25.34■■□□□ 1.65
SSBP4-201ENST00000270061 GDAP1L1Q96MZ0 367 aa25.34■■□□□ 1.65
SSBP4-201ENST00000270061 ACBD3Q9H3P7 528 aa25.34■■□□□ 1.65
SSBP4-201ENST00000270061 CALCOCO1Q9P1Z2 691 aa25.34■■□□□ 1.65
SSBP4-201ENST00000270061 HPCAL4Q9UM19 191 aa25.34■■□□□ 1.65
SSBP4-201ENST00000270061 NAALADL1Q9UQQ1 740 aa25.34■■□□□ 1.65
SSBP4-201ENST00000270061 PROB1E7EW31 1015 aa25.33■■□□□ 1.65
SSBP4-201ENST00000270061 CAPN9O14815 690 aa25.33■■□□□ 1.65
SSBP4-201ENST00000270061 NFATC1O95644 943 aa25.33■■□□□ 1.65
SSBP4-201ENST00000270061 ITGAVP06756 1048 aa25.33■■□□□ 1.65
SSBP4-201ENST00000270061 ATXN1P54253 815 aaKnown RBP25.33■■□□□ 1.65
SSBP4-201ENST00000270061 CCINQ13939 588 aa25.33■■□□□ 1.65
SSBP4-201ENST00000270061 ZC3H12AQ5D1E8 599 aaKnown RBP25.33■■□□□ 1.65
SSBP4-201ENST00000270061 CHFRQ96EP1 664 aa25.33■■□□□ 1.65
SSBP4-201ENST00000270061 CCDC114Q96M63 670 aa25.33■■□□□ 1.65
SSBP4-201ENST00000270061 FAM186AA6NE01 2351 aa25.33■■□□□ 1.65
SSBP4-201ENST00000270061 SLC9A3R1O14745 358 aaPredicted RBP25.33■■□□□ 1.65
SSBP4-201ENST00000270061 L1CAMP32004 1257 aa25.33■■□□□ 1.65
SSBP4-201ENST00000270061 AIF1P55008 147 aa25.33■■□□□ 1.65
SSBP4-201ENST00000270061 MAMSTRQ6ZN01 415 aa25.33■■□□□ 1.65
SSBP4-201ENST00000270061 EXOC4Q96A65 974 aa25.33■■□□□ 1.65
SSBP4-201ENST00000270061 ZFRQ96KR1 1074 aaKnown RBP25.33■■□□□ 1.65
SSBP4-201ENST00000270061 WHRNQ9P202 907 aa25.33■■□□□ 1.65
SSBP4-201ENST00000270061 AP4E1Q9UPM8 1137 aa25.33■■□□□ 1.65
SSBP4-201ENST00000270061 PTPRZ1P23471 2315 aaPredicted RBP25.32■■□□□ 1.64
SSBP4-201ENST00000270061 M0QYT0 321 aa25.32■■□□□ 1.64
SSBP4-201ENST00000270061 TRDMT1O14717 391 aaKnown RBP25.32■■□□□ 1.64
SSBP4-201ENST00000270061 HSPA9P38646 679 aaKnown RBP25.32■■□□□ 1.64
SSBP4-201ENST00000270061 CSTF1Q05048 431 aaKnown RBP25.32■■□□□ 1.64
SSBP4-201ENST00000270061 GRSF1Q12849 480 aaKnown RBP eCLIP25.32■■□□□ 1.64
SSBP4-201ENST00000270061 MMRN1Q13201 1228 aa25.32■■□□□ 1.64
SSBP4-201ENST00000270061 CA9Q16790 459 aa25.32■■□□□ 1.64
SSBP4-201ENST00000270061 ZNF528Q3MIS6 628 aa25.32■■□□□ 1.64
SSBP4-201ENST00000270061 TMEM196Q5HYL7 178 aa25.32■■□□□ 1.64
SSBP4-201ENST00000270061 ZC3H14Q6PJT7 736 aaKnown RBP25.32■■□□□ 1.64
SSBP4-201ENST00000270061 ZDHHC24Q6UX98 284 aa25.32■■□□□ 1.64
SSBP4-201ENST00000270061 CCDC89Q8N998 374 aa25.32■■□□□ 1.64
SSBP4-201ENST00000270061 ACTL9Q8TC94 416 aa25.32■■□□□ 1.64
SSBP4-201ENST00000270061 CCHCR1Q8TD31 782 aa25.32■■□□□ 1.64
SSBP4-201ENST00000270061 FAM118BQ9BPY3 351 aa25.32■■□□□ 1.64
SSBP4-201ENST00000270061 GPATCH2LQ9NWQ4 482 aa25.32■■□□□ 1.64
SSBP4-201ENST00000270061 FZD10Q9ULW2 581 aa25.32■■□□□ 1.64
SSBP4-201ENST00000270061 FRYLO94915 3013 aa25.31■■□□□ 1.64
SSBP4-201ENST00000270061 RRP9O43818 475 aaKnown RBP25.31■■□□□ 1.64
SSBP4-201ENST00000270061 ITIH2P19823 946 aa25.31■■□□□ 1.64
SSBP4-201ENST00000270061 IVDP26440 423 aa25.31■■□□□ 1.64
SSBP4-201ENST00000270061 PSEN1P49768 467 aa25.31■■□□□ 1.64
SSBP4-201ENST00000270061 OTUD4Q01804 1114 aaKnown RBP25.31■■□□□ 1.64
SSBP4-201ENST00000270061 ANKRD20A8PQ5CZ79 823 aa25.31■■□□□ 1.64
SSBP4-201ENST00000270061 SYNPOQ8N3V7 929 aa25.31■■□□□ 1.64
SSBP4-201ENST00000270061 ALLCQ8N6M5 410 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms