RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 ADGRF1Q5T601 910 aa14.46□□□□□ -0.09
SS18-201ENST00000269137 PPP1R21Q6ZMI0 780 aa14.46□□□□□ -0.09
SS18-201ENST00000269137 TAB3Q8N5C8 712 aaPredicted RBP14.46□□□□□ -0.09
SS18-201ENST00000269137 ARL14EPQ8N8R7 260 aaPredicted RBP14.46□□□□□ -0.09
SS18-201ENST00000269137 MCUQ8NE86 351 aa14.46□□□□□ -0.09
SS18-201ENST00000269137 ZSCAN18Q8TBC5 510 aaPredicted RBP14.46□□□□□ -0.09
SS18-201ENST00000269137 FATE1Q969F0 183 aa14.46□□□□□ -0.09
SS18-201ENST00000269137 CYP2S1Q96SQ9 504 aa14.46□□□□□ -0.09
SS18-201ENST00000269137 SH3GL2Q99962 352 aa14.46□□□□□ -0.09
SS18-201ENST00000269137 CORO1BQ9BR76 489 aa14.46□□□□□ -0.09
SS18-201ENST00000269137 PBX4Q9BYU1 374 aa14.46□□□□□ -0.09
SS18-201ENST00000269137 LMAN2LQ9H0V9 348 aa14.46□□□□□ -0.09
SS18-201ENST00000269137 CDC42EP4Q9H3Q1 356 aaKnown RBP14.46□□□□□ -0.09
SS18-201ENST00000269137 IGSF9Q9P2J2 1179 aa14.46□□□□□ -0.09
SS18-201ENST00000269137 AGO1Q9UL18 857 aaKnown RBP14.46□□□□□ -0.09
SS18-201ENST00000269137 DOCK6Q96HP0 2047 aa14.46□□□□□ -0.09
SS18-201ENST00000269137 PDE4DIPQ5VU43 2346 aa14.46□□□□□ -0.1
SS18-201ENST00000269137 SHROOM3Q8TF72 1996 aa14.46□□□□□ -0.1
SS18-201ENST00000269137 SOBPA7XYQ1 873 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 E7ESA3 106 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 KCNK1O00180 336 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 DFFAO00273 331 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 ALOX15BO15296 676 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 RIPK2O43353 540 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 MAFKO60675 156 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 TTC4O95801 387 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 EPCAMP16422 314 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 PTPN2P17706 415 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 TPSB2P20231 275 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 SLC6A4P31645 630 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 MAGEA4P43358 317 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 SMAD3P84022 425 aaKnown RBP14.45□□□□□ -0.1
SS18-201ENST00000269137 CYP4F8P98187 520 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 CDK16Q00536 496 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 TPSAB1Q15661 275 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 RAB30Q15771 203 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 TEX44Q53QW1 395 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 RABGAP1LQ5R372 815 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 DENND2CQ68D51 928 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 CENPUQ71F23 418 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 LGI2Q8N0V4 545 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 LEMD2Q8NC56 503 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 ADAMTS19Q8TE59 1207 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 MYEOVQ96EZ4 313 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 PKNOX2Q96KN3 472 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 RUFY1Q96T51 708 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 ATXN3LQ9H3M9 355 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 SEPT10Q9P0V9 454 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 MSRAQ9UJ68 235 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 TRANK1O15050 2925 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 TRAV19A0A0A6YYK7 116 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 OPA1O60313 960 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 GREM1O60565 184 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 XYLBO75191 536 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 RFPL2O75678 378 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 MYL4P12829 197 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 EIF3BP55884 814 aaKnown RBP14.45□□□□□ -0.1
SS18-201ENST00000269137 YBEYP58557 167 aaPredicted RBP14.45□□□□□ -0.1
SS18-201ENST00000269137 IFI35P80217 286 aaPredicted RBP14.45□□□□□ -0.1
SS18-201ENST00000269137 TIGD7Q6NT04 549 aaPredicted RBP14.45□□□□□ -0.1
SS18-201ENST00000269137 ELMSAN1Q6PJG2 1045 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 TFAP2DQ7Z6R9 452 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 PDIK1LQ8N165 341 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 DEPDC1BQ8WUY9 529 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 WBP2Q969T9 261 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 SAYSD1Q9NPB0 183 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 EIF2B3Q9NR50 452 aaKnown RBP14.45□□□□□ -0.1
SS18-201ENST00000269137 DNAJC17Q9NVM6 304 aaKnown RBP14.45□□□□□ -0.1
SS18-201ENST00000269137 SMPD4Q9NXE4 827 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 ZDHHC7Q9NXF8 308 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 KLHL8Q9P2G9 620 aaPredicted RBP14.45□□□□□ -0.1
SS18-201ENST00000269137 CPQQ9Y646 472 aa14.45□□□□□ -0.1
SS18-201ENST00000269137 A0A1W2PRU2 124 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 ARHGAP42A6NI28 874 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 GOLGA8MH3BSY2 632 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 MATN3O15232 486 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 SYF2O95926 243 aaKnown RBP14.44□□□□□ -0.1
SS18-201ENST00000269137 APRTP07741 180 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 DDX6P26196 483 aaKnown RBP eCLIP14.44□□□□□ -0.1
SS18-201ENST00000269137 PAPOLAP51003 745 aaKnown RBP14.44□□□□□ -0.1
SS18-201ENST00000269137 CDH4P55283 916 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 FAM193AP78312 1265 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 GAD2Q05329 585 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 SLC29A2Q14542 456 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 PARP15Q460N3 678 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 HSP90B2PQ58FF3 399 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 FAM182AQ5T1J6 154 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 FAXCQ5TGI0 409 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 ITPRIPL1Q6GPH6 555 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 RFWD3Q6PCD5 774 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 Q6ZNB5 142 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 ARHGAP36Q6ZRI8 547 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 PID1Q7Z2X4 250 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 MAB21L3Q8N8X9 362 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 SHKBP1Q8TBC3 707 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 TEKT5Q96M29 485 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 TTC25Q96NG3 672 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 IL12RB2Q99665 862 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 NINJ2Q9NZG7 142 aa14.44□□□□□ -0.1
SS18-201ENST00000269137 IPO11Q9UI26 975 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms