RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 PLK1P53350 603 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 CCDC142Q17RM4 750 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 RASGEF1CQ8N431 466 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 RSPH1Q8WYR4 309 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 MAGED4Q96JG8 741 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 C9orf16Q9BUW7 83 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 PIF1Q9H611 641 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 ATP13A1Q9HD20 1204 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 ADAM28Q9UKQ2 775 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 TSC22D4Q9Y3Q8 395 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 RASSF9O75901 435 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 LYPLA2O95372 231 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 TRUB2O95900 331 aaKnown RBP10.95□□□□□ -0.66
CD44-201ENST00000263398 IMPDH2P12268 514 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 CCDC130P13994 396 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 EPB42P16452 691 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 PTPRAP18433 802 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 PSMB4P28070 264 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 NUMBP49757 651 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 BFSP2Q13515 415 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 PPP4R4Q6NUP7 873 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 CYP2R1Q6VVX0 501 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 CCDC103Q8IW40 242 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 DHRSXQ8N5I4 330 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 ZNF670Q9BS34 389 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 USE1Q9NZ43 259 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 UMODL1Q5DID0 1318 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 NFAT5O94916 1531 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 PRR23D1E9PI22 279 aaPredicted RBP10.95□□□□□ -0.66
CD44-201ENST00000263398 LGALS2P05162 132 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 HOXC6P09630 235 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 PRR23D2P0DMB1 279 aaPredicted RBP10.95□□□□□ -0.66
CD44-201ENST00000263398 POU1F1P28069 291 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 IL5RAQ01344 420 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 PCID2Q5JVF3 399 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 HGSNATQ68CP4 663 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 NPNTQ6UXI9 565 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 C11orf96Q7Z7L8 435 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 TRABD2AQ86V40 505 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 HERC6Q8IVU3 1022 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 SENP8Q96LD8 212 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 PHACTR1Q9C0D0 580 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 SLC7A5P2Q9GIP4 190 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 SNCAIPQ9Y6H5 919 aa10.95□□□□□ -0.66
CD44-201ENST00000263398 A0A087X1B8 175 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 PSMD12O00232 456 aaPredicted RBP10.94□□□□□ -0.66
CD44-201ENST00000263398 CCNT2O60583 730 aaKnown RBP10.94□□□□□ -0.66
CD44-201ENST00000263398 KRT75O95678 551 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 DLGAP3O95886 979 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 BCL10O95999 233 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 MRPS22P82650 360 aaKnown RBP10.94□□□□□ -0.66
CD44-201ENST00000263398 PPIDQ08752 370 aaKnown RBP10.94□□□□□ -0.66
CD44-201ENST00000263398 ECM1Q16610 540 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 NAIF1Q69YI7 327 aaPredicted RBP10.94□□□□□ -0.66
CD44-201ENST00000263398 UNC5AQ6ZN44 842 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 STK32CQ86UX6 486 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 PALB2Q86YC2 1186 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 OR5B17Q8NGF7 314 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 OR52K1Q8NGK4 314 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 PYDC1Q8WXC3 89 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 USP6NLQ92738 828 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 SEMA4DQ92854 862 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 EBNA1BP2Q99848 306 aaKnown RBP10.94□□□□□ -0.66
CD44-201ENST00000263398 CDT1Q9H211 546 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 POMKQ9H5K3 350 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 WDR41Q9HAD4 459 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 SLCO1B3Q9NPD5 702 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 KRT84Q9NSB2 600 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 OR12D3Q9UGF7 316 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 LNPEPQ9UIQ6 1025 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 SLC25A13Q9UJS0 675 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 DYRK1BQ9Y463 629 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 A0A087WXM4 84 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 CCDC154A6NI56 674 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 MAFO75444 373 aaPredicted RBP10.94□□□□□ -0.66
CD44-201ENST00000263398 URODP06132 367 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 YWHAQP27348 245 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 ADORA2AP29274 412 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 CHI3L1P36222 383 aaPredicted RBP10.94□□□□□ -0.66
CD44-201ENST00000263398 SLC20A2Q08357 652 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 UCMAQ8WVF2 138 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 SEPT8Q92599 483 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 RNF145Q96MT1 663 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 LRMDAQ9H2I8 198 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 GBA2Q9HCG7 927 aaPredicted RBP10.94□□□□□ -0.66
CD44-201ENST00000263398 NFICP08651 508 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 PTPN1P18031 435 aaKnown RBP10.94□□□□□ -0.66
CD44-201ENST00000263398 MSH3P20585 1137 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 EPHX2P34913 555 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 KRT20P35900 424 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 SERPINH1P50454 418 aaKnown RBP10.94□□□□□ -0.66
CD44-201ENST00000263398 TAS2R40P59535 323 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 PWP1Q13610 501 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 CAPSQ13938 189 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 FAM45BPQ6NSW5 357 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 NET1Q7Z628 596 aaPredicted RBP10.94□□□□□ -0.66
CD44-201ENST00000263398 RIOX2Q8IUF8 465 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 EID3Q8N140 333 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 FIG4Q92562 907 aa10.94□□□□□ -0.66
CD44-201ENST00000263398 MFSD14AQ96MC6 490 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms