RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 PIPSLA2A3N6 862 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 CYP2A6P11509 494 aaPredicted RBP12.31□□□□□ -0.44
COL8A1-201ENST00000261037 FASP25445 335 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 PRKAA1Q13131 559 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 RSBN1Q5VWQ0 802 aaPredicted RBP12.31□□□□□ -0.44
COL8A1-201ENST00000261037 TAF2Q6P1X5 1199 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 CASP12Q6UXS9 341 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 SPRTNQ9H040 489 aaPredicted RBP12.31□□□□□ -0.44
COL8A1-201ENST00000261037 KLHL25Q9H0H3 589 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 ACP6Q9NPH0 428 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 LRRC4BQ9NT99 713 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.31□□□□□ -0.44
COL8A1-201ENST00000261037 TAS2R13Q9NYV9 303 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.31□□□□□ -0.44
COL8A1-201ENST00000261037 H3BN98 237 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 MRASO14807 208 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 MTA2O94776 668 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 CLPTM1O96005 669 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 AKR1A1P14550 325 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 PTPN3P26045 913 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 PSMB4P28070 264 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 SCNN1GP51170 649 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 CCR4P51679 360 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 ERVK-9P63128 1117 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 KCNK18Q7Z418 384 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 SNX32Q86XE0 403 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 ZDHHC17Q8IUH5 632 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 EID3Q8N140 333 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 NSMCE2Q96MF7 247 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 DUSP9Q99956 384 aaKnown RBP12.31□□□□□ -0.44
COL8A1-201ENST00000261037 ADAM2Q99965 735 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 AVENQ9NQS1 362 aaPredicted RBP12.31□□□□□ -0.44
COL8A1-201ENST00000261037 CATSPERZQ9NTU4 200 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 IL1RAPL1Q9NZN1 696 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 PAIP2BQ9ULR5 123 aaKnown RBP12.31□□□□□ -0.44
COL8A1-201ENST00000261037 ANKRD6Q9Y2G4 727 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 PXDNQ92626 1479 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 ELAVL2Q12926 359 aaKnown RBP12.31□□□□□ -0.44
COL8A1-201ENST00000261037 TOMM20Q15388 145 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 SETMARQ53H47 684 aaPredicted RBP12.31□□□□□ -0.44
COL8A1-201ENST00000261037 RAP1GAP2Q684P5 730 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 FAM45BPQ6NSW5 357 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 LLGL2Q6P1M3 1020 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 ZNF621Q6ZSS3 439 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 NLNQ9BYT8 704 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 DNAJC18Q9H819 358 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 POPDC2Q9HBU9 364 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 AHSPQ9NZD4 102 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 MROH1Q8NDA8 1641 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 NFASCO94856 1347 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 FRMPD4Q14CM0 1322 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 SALL1Q9NSC2 1324 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 TRIM24O15164 1050 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 RECQL4O94761 1208 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 RTN3O95197 1032 aaPredicted RBP12.31□□□□□ -0.44
COL8A1-201ENST00000261037 LGALS2P05162 132 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 CNPP09543 421 aaKnown RBP12.31□□□□□ -0.44
COL8A1-201ENST00000261037 POLR2EP19388 210 aaKnown RBP12.31□□□□□ -0.44
COL8A1-201ENST00000261037 DGKZQ13574 1117 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 DPYSL3Q14195 570 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 CRY1Q16526 586 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 SCARA3Q6AZY7 606 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 CSGALNACT1Q8TDX6 532 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 MIEF2Q96C03 454 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 GAD1Q99259 594 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 BTBD10Q9BSF8 475 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 SERHL2Q9H4I8 314 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 SERHLQ9NQF3 203 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 KLHL28Q9NXS3 571 aa12.31□□□□□ -0.44
COL8A1-201ENST00000261037 RPA3P35244 121 aaPredicted RBP12.3□□□□□ -0.44
COL8A1-201ENST00000261037 ZNF844Q08AG5 666 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 MAD2L1Q13257 205 aaPredicted RBP12.3□□□□□ -0.44
COL8A1-201ENST00000261037 ATAD3BQ5T9A4 648 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 HLA-DQA1Q5Y7H0 255 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 MACC1Q6ZN28 852 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 FAM183BPQ6ZVS7 135 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 TRAPPC5Q8IUR0 188 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 SYT12Q8IV01 421 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 BRSK2Q8IWQ3 736 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 POMGNT2Q8NAT1 580 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 ZBTB10Q96DT7 871 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 ELOVL4Q9GZR5 314 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 MTFR1LQ9H019 292 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 ETNK2Q9NVF9 386 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 FBXL21Q9UKT6 434 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 CBX6O95503 412 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 EIF2S1P05198 315 aaKnown RBP12.3□□□□□ -0.44
COL8A1-201ENST00000261037 FCGR1AP12314 374 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 H2AFXP16104 143 aaPredicted RBP12.3□□□□□ -0.44
COL8A1-201ENST00000261037 CD86P42081 329 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 PKNOX1P55347 436 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 RAB14P61106 215 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 INAQ16352 499 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 WSCD1Q658N2 575 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 ALG9Q9H6U8 611 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 DCLRE1BQ9H816 532 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 HES2Q9Y543 173 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 COL5A2P05997 1499 aaPredicted RBP12.3□□□□□ -0.44
COL8A1-201ENST00000261037 ACKR2O00590 384 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 FAM58BPP0C7Q3 252 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms