RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 FAM182AQ5T1J6 154 aa17.95■□□□□ 0.46
SRSF1-201ENST00000258962 RNASEH2BQ5TBB1 312 aaKnown RBP17.95■□□□□ 0.46
SRSF1-201ENST00000258962 MANEALQ5VSG8 457 aa17.95■□□□□ 0.46
SRSF1-201ENST00000258962 ALS2CLQ60I27 953 aa17.95■□□□□ 0.46
SRSF1-201ENST00000258962 GAREM2Q75VX8 874 aa17.95■□□□□ 0.46
SRSF1-201ENST00000258962 NETO2Q8NC67 525 aa17.95■□□□□ 0.46
SRSF1-201ENST00000258962 PWWP2AQ96N64 755 aa17.95■□□□□ 0.46
SRSF1-201ENST00000258962 EPB41L4BQ9H329 900 aa17.95■□□□□ 0.46
SRSF1-201ENST00000258962 CCSER2Q9H7U1 834 aa17.95■□□□□ 0.46
SRSF1-201ENST00000258962 MED4Q9NPJ6 270 aa17.95■□□□□ 0.46
SRSF1-201ENST00000258962 TPX2Q9ULW0 747 aaKnown RBP17.95■□□□□ 0.46
SRSF1-201ENST00000258962 NUMBLQ9Y6R0 609 aa17.95■□□□□ 0.46
SRSF1-201ENST00000258962 DOCK4Q8N1I0 1966 aa17.95■□□□□ 0.46
SRSF1-201ENST00000258962 MOSPD3O75425 235 aa17.94■□□□□ 0.46
SRSF1-201ENST00000258962 TBX4P57082 545 aa17.94■□□□□ 0.46
SRSF1-201ENST00000258962 TRIP4Q15650 581 aaPredicted RBP17.94■□□□□ 0.46
SRSF1-201ENST00000258962 SPDYCQ5MJ68 293 aa17.94■□□□□ 0.46
SRSF1-201ENST00000258962 C10orf120Q5SQS8 335 aa17.94■□□□□ 0.46
SRSF1-201ENST00000258962 CFAP58Q5T655 872 aa17.94■□□□□ 0.46
SRSF1-201ENST00000258962 PARM1Q6UWI2 310 aa17.94■□□□□ 0.46
SRSF1-201ENST00000258962 TP53INP2Q8IXH6 220 aa17.94■□□□□ 0.46
SRSF1-201ENST00000258962 SLC44A3Q8N4M1 653 aa17.94■□□□□ 0.46
SRSF1-201ENST00000258962 NPWQ8N729 165 aa17.94■□□□□ 0.46
SRSF1-201ENST00000258962 GOLGA6L1Q8N7Z2 621 aa17.94■□□□□ 0.46
SRSF1-201ENST00000258962 ST13P5Q8NFI4 369 aaPredicted RBP17.94■□□□□ 0.46
SRSF1-201ENST00000258962 MYRFLQ96LU7 910 aa17.94■□□□□ 0.46
SRSF1-201ENST00000258962 TMEM51Q9NW97 253 aa17.94■□□□□ 0.46
SRSF1-201ENST00000258962 FARP1Q9Y4F1 1045 aaPredicted RBP17.94■□□□□ 0.46
SRSF1-201ENST00000258962 NUP205Q92621 2012 aa17.94■□□□□ 0.46
SRSF1-201ENST00000258962 MOCS2O96007 188 aaPredicted RBP17.93■□□□□ 0.46
SRSF1-201ENST00000258962 IGLV3-27P01718 113 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 VAV1P15498 845 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 HOXC13P31276 330 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 PMS2P54278 862 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 FAM193AP78312 1265 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 PRKD1Q15139 912 aaPredicted RBP17.93■□□□□ 0.46
SRSF1-201ENST00000258962 UBAP2Q5T6F2 1119 aaKnown RBP17.93■□□□□ 0.46
SRSF1-201ENST00000258962 SNX30Q5VWJ9 437 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 UBLCP1Q8WVY7 318 aaPredicted RBP17.93■□□□□ 0.46
SRSF1-201ENST00000258962 OVCA2Q8WZ82 227 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 CPT1BQ92523 772 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 PRCCQ92733 491 aaPredicted RBP17.93■□□□□ 0.46
SRSF1-201ENST00000258962 FGF14Q92915 247 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 SMARCD2Q92925 531 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 TRMT2BQ96GJ1 504 aaKnown RBP17.93■□□□□ 0.46
SRSF1-201ENST00000258962 SIK2Q9H0K1 926 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 ZFP14Q9HCL3 533 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 MARCH2Q9P0N8 246 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 ZMYM5Q9UJ78 669 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 SHROOM3Q8TF72 1996 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.93■□□□□ 0.46
SRSF1-201ENST00000258962 HACD1B0YJ81 288 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 TLR5O60602 858 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 SYF2O95926 243 aaKnown RBP17.93■□□□□ 0.46
SRSF1-201ENST00000258962 EPHB2P29323 1055 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 NRG1Q02297 640 aaPredicted RBP17.93■□□□□ 0.46
SRSF1-201ENST00000258962 SIGLEC14Q08ET2 396 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 MORF4L2Q15014 288 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 FAM78AQ5JUQ0 283 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 GPR158Q5T848 1215 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 PIK3R6Q5UE93 754 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 ANKRD22Q5VYY1 191 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 TRIM67Q6ZTA4 783 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 BZW1Q7L1Q6 419 aaKnown RBP17.93■□□□□ 0.46
SRSF1-201ENST00000258962 CCDC25Q86WR0 208 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 MIB1Q86YT6 1006 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 ZNF276Q8N554 614 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 ZCCHC9Q8N567 271 aaKnown RBP17.93■□□□□ 0.46
SRSF1-201ENST00000258962 PDZD8Q8NEN9 1154 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 ZSCAN18Q8TBC5 510 aaPredicted RBP17.93■□□□□ 0.46
SRSF1-201ENST00000258962 TFB1MQ8WVM0 346 aaKnown RBP17.93■□□□□ 0.46
SRSF1-201ENST00000258962 MRPS31Q92665 395 aaKnown RBP17.93■□□□□ 0.46
SRSF1-201ENST00000258962 ZSWIM3Q96MP5 696 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 KXD1Q9BQD3 176 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 SEMA4AQ9H3S1 761 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 TASP1Q9H6P5 420 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 IL21Q9HBE4 155 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 DNAJC17Q9NVM6 304 aaKnown RBP17.93■□□□□ 0.46
SRSF1-201ENST00000258962 SHOC2Q9UQ13 582 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 PLAAQ9Y263 795 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 HS3ST4Q9Y661 456 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 NFS1Q9Y697 457 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 DENND4CQ5VZ89 1909 aa17.93■□□□□ 0.46
SRSF1-201ENST00000258962 ZNF840PA6NDX5 716 aa17.92■□□□□ 0.46
SRSF1-201ENST00000258962 NRG2O14511 850 aaPredicted RBP17.92■□□□□ 0.46
SRSF1-201ENST00000258962 ECI2O75521 394 aa17.92■□□□□ 0.46
SRSF1-201ENST00000258962 SLC2A3P11169 496 aa17.92■□□□□ 0.46
SRSF1-201ENST00000258962 SLMAPQ14BN4 828 aa17.92■□□□□ 0.46
SRSF1-201ENST00000258962 TMEM31Q5JXX7 168 aa17.92■□□□□ 0.46
SRSF1-201ENST00000258962 C14orf80Q86SX3 495 aa17.92■□□□□ 0.46
SRSF1-201ENST00000258962 PPIL6Q8IXY8 311 aa17.92■□□□□ 0.46
SRSF1-201ENST00000258962 TAB3Q8N5C8 712 aaPredicted RBP17.92■□□□□ 0.46
SRSF1-201ENST00000258962 NAT8LQ8N9F0 302 aa17.92■□□□□ 0.46
SRSF1-201ENST00000258962 ASB16Q96NS5 453 aa17.92■□□□□ 0.46
SRSF1-201ENST00000258962 RUFY1Q96T51 708 aa17.92■□□□□ 0.46
SRSF1-201ENST00000258962 LGMNQ99538 433 aa17.92■□□□□ 0.46
SRSF1-201ENST00000258962 SH3GL2Q99962 352 aa17.92■□□□□ 0.46
SRSF1-201ENST00000258962 RPP25Q9BUL9 199 aaKnown RBP17.92■□□□□ 0.46
SRSF1-201ENST00000258962 KLC2Q9H0B6 622 aa17.92■□□□□ 0.46
SRSF1-201ENST00000258962 PABPC3Q9H361 631 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms