RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 USP30Q70CQ3 517 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 FAM71AQ8IYT1 594 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 OR52K2Q8NGK3 314 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 PTPRN2Q92932 1015 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 OMDQ99983 421 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 ORAI3Q9BRQ5 295 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 PDCL3Q9H2J4 239 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 SAMSN1Q9NSI8 373 aaKnown RBP19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 PCOLCE2Q9UKZ9 415 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 ZMIZ1Q9ULJ6 1067 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 ANKRD6Q9Y2G4 727 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 NEUROG3Q9Y4Z2 214 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 FHOD1Q9Y613 1164 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 HS3ST4Q9Y661 456 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 ITIH6Q6UXX5 1313 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 A0A1B0GVM2 712 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 TCAF2A6NFQ2 919 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 M0QYT0 321 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 DAB1O75553 588 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 FTH1P19P0C7X4 201 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 TFE3P19532 575 aaPredicted RBP19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 OTUD1Q5VV17 481 aaPredicted RBP19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 NCEH1Q6PIU2 408 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 C14orf80Q86SX3 495 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 AADATQ8N5Z0 425 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 SIK2Q9H0K1 926 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 NUP62CLQ9H1M0 184 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 SCML1Q9UN30 329 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 DMXL2Q8TDJ6 3036 aa19.59■□□□□ 0.73
TM6SF1-201ENST00000258909 CBFA2T3O75081 653 aa19.59■□□□□ 0.73
TM6SF1-201ENST00000258909 PAGE1O75459 146 aa19.59■□□□□ 0.73
TM6SF1-201ENST00000258909 ERCC5P28715 1186 aaPredicted RBP19.59■□□□□ 0.73
TM6SF1-201ENST00000258909 NOS2P35228 1153 aa19.59■□□□□ 0.73
TM6SF1-201ENST00000258909 RDXP35241 583 aaKnown RBP19.59■□□□□ 0.73
TM6SF1-201ENST00000258909 KCNJ12Q14500 433 aa19.59■□□□□ 0.73
TM6SF1-201ENST00000258909 TEAD4Q15561 434 aa19.59■□□□□ 0.73
TM6SF1-201ENST00000258909 ZNF423Q2M1K9 1284 aa19.59■□□□□ 0.73
TM6SF1-201ENST00000258909 TAF3Q5VWG9 929 aa19.59■□□□□ 0.73
TM6SF1-201ENST00000258909 SLC26A9Q7LBE3 791 aa19.59■□□□□ 0.73
TM6SF1-201ENST00000258909 EBF2Q9HAK2 575 aa19.59■□□□□ 0.73
TM6SF1-201ENST00000258909 ANLNQ9NQW6 1124 aa19.59■□□□□ 0.73
TM6SF1-201ENST00000258909 PIGVQ9NUD9 493 aa19.59■□□□□ 0.73
TM6SF1-201ENST00000258909 MSRB2Q9Y3D2 182 aa19.59■□□□□ 0.73
TM6SF1-201ENST00000258909 SNX10Q9Y5X0 201 aa19.59■□□□□ 0.73
TM6SF1-201ENST00000258909 TP53BP1Q12888 1972 aaPredicted RBP19.59■□□□□ 0.73
TM6SF1-201ENST00000258909 TRIM16O95361 564 aa19.58■□□□□ 0.72
TM6SF1-201ENST00000258909 IL1BP01584 269 aa19.58■□□□□ 0.72
TM6SF1-201ENST00000258909 ZNF883P0CG24 379 aa19.58■□□□□ 0.72
TM6SF1-201ENST00000258909 CYP11B1P15538 503 aa19.58■□□□□ 0.72
TM6SF1-201ENST00000258909 NNMTP40261 264 aa19.58■□□□□ 0.72
TM6SF1-201ENST00000258909 GRIA4P48058 902 aa19.58■□□□□ 0.72
TM6SF1-201ENST00000258909 METAP1P53582 386 aa19.58■□□□□ 0.72
TM6SF1-201ENST00000258909 SLC12A1Q13621 1099 aa19.58■□□□□ 0.72
TM6SF1-201ENST00000258909 C2CD6Q53TS8 623 aa19.58■□□□□ 0.72
TM6SF1-201ENST00000258909 KLHDC7AQ5VTJ3 777 aa19.58■□□□□ 0.72
TM6SF1-201ENST00000258909 TTC39BQ5VTQ0 682 aaPredicted RBP19.58■□□□□ 0.72
TM6SF1-201ENST00000258909 RAB44Q7Z6P3 723 aaPredicted RBP19.58■□□□□ 0.72
TM6SF1-201ENST00000258909 ADAT2Q7Z6V5 191 aaKnown RBP19.58■□□□□ 0.72
TM6SF1-201ENST00000258909 SLCO6A1Q86UG4 719 aa19.58■□□□□ 0.72
TM6SF1-201ENST00000258909 SLC6A18Q96N87 628 aa19.58■□□□□ 0.72
TM6SF1-201ENST00000258909 OSGEPQ9NPF4 335 aa19.58■□□□□ 0.72
TM6SF1-201ENST00000258909 DACH1Q9UI36 760 aa19.58■□□□□ 0.72
TM6SF1-201ENST00000258909 BTBD3Q9Y2F9 522 aa19.58■□□□□ 0.72
TM6SF1-201ENST00000258909 PLK4O00444 970 aa19.57■□□□□ 0.72
TM6SF1-201ENST00000258909 ADCY5O95622 1261 aa19.57■□□□□ 0.72
TM6SF1-201ENST00000258909 SULT1E1P49888 294 aa19.57■□□□□ 0.72
TM6SF1-201ENST00000258909 PLK1P53350 603 aa19.57■□□□□ 0.72
TM6SF1-201ENST00000258909 SNX16P57768 344 aa19.57■□□□□ 0.72
TM6SF1-201ENST00000258909 BPIFB4P59827 614 aa19.57■□□□□ 0.72
TM6SF1-201ENST00000258909 IL9RQ01113 521 aa19.57■□□□□ 0.72
TM6SF1-201ENST00000258909 ACCSLQ4AC99 568 aa19.57■□□□□ 0.72
TM6SF1-201ENST00000258909 KDF1Q8NAX2 398 aaPredicted RBP19.57■□□□□ 0.72
TM6SF1-201ENST00000258909 TMEM35BQ8NCS4 154 aa19.57■□□□□ 0.72
TM6SF1-201ENST00000258909 ZNF397Q8NF99 534 aaPredicted RBP19.57■□□□□ 0.72
TM6SF1-201ENST00000258909 RHBDD1Q8TEB9 315 aa19.57■□□□□ 0.72
TM6SF1-201ENST00000258909 ALG14Q96F25 216 aa19.57■□□□□ 0.72
TM6SF1-201ENST00000258909 NPY6RQ99463 290 aa19.57■□□□□ 0.72
TM6SF1-201ENST00000258909 FEM1AQ9BSK4 669 aa19.57■□□□□ 0.72
TM6SF1-201ENST00000258909 TAB2Q9NYJ8 693 aa19.57■□□□□ 0.72
TM6SF1-201ENST00000258909 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.57■□□□□ 0.72
TM6SF1-201ENST00000258909 FREM2Q5SZK8 3169 aa19.57■□□□□ 0.72
TM6SF1-201ENST00000258909 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.56■□□□□ 0.72
TM6SF1-201ENST00000258909 A0A1W2PPC4 97 aa19.56■□□□□ 0.72
TM6SF1-201ENST00000258909 LRRC72A6NJI9 287 aa19.56■□□□□ 0.72
TM6SF1-201ENST00000258909 H0Y8X5 98 aa19.56■□□□□ 0.72
TM6SF1-201ENST00000258909 I6L893 689 aaPredicted RBP19.56■□□□□ 0.72
TM6SF1-201ENST00000258909 CNTN5O94779 1100 aa19.56■□□□□ 0.72
TM6SF1-201ENST00000258909 SULT2A1Q06520 285 aa19.56■□□□□ 0.72
TM6SF1-201ENST00000258909 SFSWAPQ12872 951 aaKnown RBP19.56■□□□□ 0.72
TM6SF1-201ENST00000258909 ZNF177Q13360 481 aaPredicted RBP19.56■□□□□ 0.72
TM6SF1-201ENST00000258909 ELAVL3Q14576 367 aaKnown RBP19.56■□□□□ 0.72
TM6SF1-201ENST00000258909 PRAMEF14Q5SWL7 426 aa19.56■□□□□ 0.72
TM6SF1-201ENST00000258909 SND1Q7KZF4 910 aaKnown RBP eCLIP19.56■□□□□ 0.72
TM6SF1-201ENST00000258909 OR2T34Q8NGX1 318 aa19.56■□□□□ 0.72
TM6SF1-201ENST00000258909 OR14C36Q8NHC7 312 aa19.56■□□□□ 0.72
TM6SF1-201ENST00000258909 FRS2Q8WU20 508 aa19.56■□□□□ 0.72
TM6SF1-201ENST00000258909 TKTL2Q9H0I9 626 aa19.56■□□□□ 0.72
TM6SF1-201ENST00000258909 TMPRSS4Q9NRS4 437 aa19.56■□□□□ 0.72
TM6SF1-201ENST00000258909 ADAMTS1Q9UHI8 967 aa19.56■□□□□ 0.72
TM6SF1-201ENST00000258909 RALYQ9UKM9 306 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms