RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 ANKRD49Q8WVL7 239 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 DPY30Q9C005 99 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 GMPPBQ9Y5P6 360 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 H3BN98 237 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 NNMTP40261 264 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 IDH2P48735 452 aaKnown RBP13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 VBP1P61758 197 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 FAAP100Q0VG06 881 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 EPC2Q52LR7 807 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 RBM12BQ8IXT5 1001 aaKnown RBP13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 SLITRK2Q9H156 845 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 PREBQ9HCU5 417 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 S100A14Q9HCY8 104 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 POLLQ9UGP5 575 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 ARHGAP23Q9P227 1491 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 MDM4O15151 490 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 VPS4BO75351 444 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 DPEP1P16444 411 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 RHAGQ02094 409 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 MAD2L1Q13257 205 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 SYTL3Q4VX76 610 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 ZCCHC23Q6ZST2 131 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 SPAG4Q9NPE6 437 aa13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 ZNF70Q9UC06 446 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA3-201ENST00000253812 SALL3Q9BXA9 1300 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 COL5A2P05997 1499 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 CAPN8A6NHC0 703 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 TMEM114B3SHH9 223 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 EDF1O60869 148 aaKnown RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 TCF4P15884 667 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 FGFR2P21802 821 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 ACADSBP45954 432 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 GEMP55040 296 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 PHC1P78364 1004 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 QPCTQ16769 361 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 FRMD7Q6ZUT3 714 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 DENND5BQ6ZUT9 1274 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 AADATQ8N5Z0 425 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 RP9Q8TA86 221 aaKnown RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 ETNPPLQ8TBG4 499 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 GSDMCQ9BYG8 508 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 ADPRHL2Q9NX46 363 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 TJP2Q9UDY2 1190 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 DRG1Q9Y295 367 aaKnown RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 PCDHGC5Q9Y5F6 944 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 EME2A4GXA9 379 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 MAGEB2O15479 319 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 ENTPD3O75355 529 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 VPS26AO75436 327 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 GRAP2O75791 330 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 CLTBP09497 229 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 RARAP10276 462 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 RPA1P27694 616 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 FXR2P51116 673 aaKnown RBP eCLIP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 SLC5A3P53794 718 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 HIST2H2ACQ16777 129 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 PRAMEF18Q5VWM3 479 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 HIST2H2AA3Q6FI13 130 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 SLC44A2Q8IWA5 706 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 RNASE11Q8TAA1 199 aaKnown RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 ZFYVE28Q9HCC9 887 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 ERGIC3Q9Y282 383 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 MRPS7Q9Y2R9 242 aaKnown RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 AAR2Q9Y312 384 aaKnown RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 H3BMM5 538 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 EXTL3O43909 919 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 USP12O75317 370 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 PRKD3O94806 890 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 TOP3BO95985 862 aaKnown RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 IFNA16P05015 189 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 MMP14P50281 582 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 RPL14P50914 215 aaKnown RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 NEK3P51956 506 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 CDC42P60953 191 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 CSHL1Q14406 222 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 C3orf67Q6ZVT6 689 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 NT5DC3Q86UY8 548 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 PALB2Q86YC2 1186 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 ACSF2Q96CM8 615 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 NIF3L1Q9GZT8 377 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 CCSER2Q9H7U1 834 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 CXorf21Q9HAI6 301 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 TRDMT1O14717 391 aaKnown RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 CDC40O60508 579 aaKnown RBP eCLIP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 ENO2P09104 434 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 CNPP09543 421 aaKnown RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 CHI3L1P36222 383 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 CAPGP40121 348 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 CDK9P50750 372 aaKnown RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 RBP5P82980 135 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 CARTPTQ16568 116 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 GRTP1Q5TC63 336 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 SWSAP1Q6NVH7 229 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 NCCRP1Q6ZVX7 275 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 ARCQ7LC44 396 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 GSTCDQ8NEC7 633 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 DNAJC11Q9NVH1 559 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 SLC9A8Q9Y2E8 581 aa13.39□□□□□ -0.27
PCDHGA3-201ENST00000253812 TDRKHQ9Y2W6 561 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms