RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 TRIM4Q9C037 500 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 MMADHCQ9H3L0 296 aaPredicted RBP12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 CDY2AQ9Y6F7 541 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 CDY1Q9Y6F8 540 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 YJEFN3A6XGL0 299 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 HACD1B0YJ81 288 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 TREHO43280 583 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 LINGO3P0C6S8 592 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 FGF3P11487 239 aaPredicted RBP12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 SP100P23497 879 aaPredicted RBP12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 NAGLUP54802 743 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 PCLAFQ15004 111 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 TEX44Q53QW1 395 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 MBLAC2Q68D91 279 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 FSTL4Q6MZW2 842 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 CCNJLQ8IV13 435 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 APBB2Q92870 758 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 EXT2Q93063 718 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 TMA16Q96EY4 203 aaKnown RBP12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 EPAS1Q99814 870 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 COG4Q9H9E3 785 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 RRN3P2A6NIE6 340 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 NRP1O14786 923 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 MT-CO1P00395 513 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 C2P06681 752 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 YBX3P16989 372 aaKnown RBP eCLIP12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 CCNFP41002 786 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 CCR10P46092 362 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 IDH3AP50213 366 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 LILRA4P59901 499 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 ART3Q13508 389 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 MARK2Q7KZI7 788 aaKnown RBP12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 KBTBD7Q8WVZ9 684 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 LPPQ93052 612 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 CATSPER2Q96P56 530 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 CPNE1Q99829 537 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 OMDQ99983 421 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 RHOBTB2Q9BYZ6 727 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 MOCS1Q9NZB8 636 aa12.89□□□□□ -0.35
RAB3IP-201ENST00000247833 MAGEA13PA6NCF6 341 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 M0QZ92 97 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 TK2O00142 265 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 MAGEC1O60732 1142 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 DARSP14868 501 aaKnown RBP12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 PKNOX1P55347 436 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 ARHGAP17Q68EM7 881 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 PSTKQ8IV42 348 aaKnown RBP12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 URGCPQ8TCY9 931 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 FCRL3Q96P31 734 aaPredicted RBP12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 GAD1Q99259 594 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 DUSP16Q9BY84 665 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 MAF1Q9H063 256 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 TKTL2Q9H0I9 626 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 NMRAL1Q9HBL8 299 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 CYP4F12Q9HCS2 524 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 TCF7L2Q9NQB0 619 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 RGS17Q9UGC6 210 aaPredicted RBP12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 RUVBL2Q9Y230 463 aaKnown RBP12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 NUP205Q92621 2012 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 FER1L6Q2WGJ9 1857 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 CHRNGP07510 517 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 MPSTP25325 297 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 CALRP27797 417 aaKnown RBP12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 ADRA1BP35368 520 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 PNPLA4P41247 253 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 ZNF460Q14592 562 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 TBCCQ15814 346 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 MMEL1Q495T6 779 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 HSF5Q4G112 596 aaPredicted RBP12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 PKDCCQ504Y2 493 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 ITPRIPL1Q6GPH6 555 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 OTOP3Q7RTS5 596 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 SNX32Q86XE0 403 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 ARHGAP26Q9UNA1 814 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 SSX2IPQ9Y2D8 614 aa12.88□□□□□ -0.35
RAB3IP-201ENST00000247833 XPO1O14980 1071 aaKnown RBP12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 TRIM13O60858 407 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 VAPBO95292 243 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 RAG1P15918 1043 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 CYP2B6P20813 491 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 IGFBP6P24592 240 aaPredicted RBP12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 CTBP1Q13363 440 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 GRTP1Q5TC63 336 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 SLC30A9Q6PML9 568 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 KBTBD2Q8IY47 623 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 RYBPQ8N488 228 aaPredicted RBP12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 SPATA22Q8NHS9 363 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 TMEM40Q8WWA1 233 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 VPS39Q96JC1 886 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 SENP8Q96LD8 212 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 TINF2Q9BSI4 451 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 CCDC106Q9BWC9 280 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 FSD1LQ9BXM9 530 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 ILKAPQ9H0C8 392 aaPredicted RBP12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 AP5M1Q9H0R1 490 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 OR12D3Q9UGF7 316 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 PDE4DIPQ5VU43 2346 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 PIGNO95427 931 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 PTPN3P26045 913 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms