RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 HOXC10Q9NYD6 342 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 SORCS3Q9UPU3 1222 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 LOC285556D6RIA3 1793 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 NFKBIAP25963 317 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 GMPSP49915 693 aaPredicted RBP14.41□□□□□ -0.1
SF1-201ENST00000227503 YWHAEP62258 255 aaKnown RBP14.41□□□□□ -0.1
SF1-201ENST00000227503 CDO1Q16878 200 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 ZNF423Q2M1K9 1284 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 C6orf183Q5T699 404 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 FAM219BQ5XKK7 198 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 NANOGP8Q6NSW7 305 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 CASC4Q6P4E1 433 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 CES3Q6UWW8 571 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 IFNLR1Q8IU57 520 aaPredicted RBP14.41□□□□□ -0.1
SF1-201ENST00000227503 THNSL1Q8IYQ7 743 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 COX4I2Q96KJ9 171 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 TPD52L2O43399 206 aaKnown RBP14.4□□□□□ -0.1
SF1-201ENST00000227503 PLIN3O60664 434 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 H6PDO95479 791 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 PRKCGP05129 697 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 GNAO1P09471 354 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 ARSAP15289 507 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 ZNF26P17031 533 aaPredicted RBP14.4□□□□□ -0.1
SF1-201ENST00000227503 PIK3R1P27986 724 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 POLR2BP30876 1174 aaKnown RBP14.4□□□□□ -0.1
SF1-201ENST00000227503 PSMC1P62191 440 aaKnown RBP14.4□□□□□ -0.1
SF1-201ENST00000227503 LAMTOR4Q0VGL1 99 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 BNIP3Q12983 259 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 SURF1Q15526 300 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 BNC2Q6ZN30 1099 aaPredicted RBP14.4□□□□□ -0.1
SF1-201ENST00000227503 ARCQ7LC44 396 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 CENPSQ8N2Z9 138 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 TMEM102Q8N9M5 508 aaPredicted RBP14.4□□□□□ -0.1
SF1-201ENST00000227503 CPXM1Q96SM3 734 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 NPAS2Q99743 824 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 OLAHQ9NV23 265 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 BIRC5O15392 142 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 PEX10O60683 326 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 E2F6O75461 281 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 CLIC3O95833 236 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 PRKCBP05771 671 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 CKMT2P17540 419 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 PRKCHP24723 683 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 RAP1GAPP47736 663 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 GABRB2P47870 512 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 EIF2B2P49770 351 aaKnown RBP14.4□□□□□ -0.1
SF1-201ENST00000227503 HADHQ16836 314 aaKnown RBP14.4□□□□□ -0.1
SF1-201ENST00000227503 USP41Q3LFD5 358 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 MTX3Q5HYI7 312 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 FGD3Q5JSP0 725 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 DCDC5Q6ZRR9 648 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 XYLT1Q86Y38 959 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 SNX31Q8N9S9 440 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 ADCY4Q8NFM4 1077 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 DCPSQ96C86 337 aaKnown RBP14.4□□□□□ -0.1
SF1-201ENST00000227503 PEBP4Q96S96 227 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 NEURL2Q9BR09 285 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 NUF2Q9BZD4 464 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 TRPV6Q9H1D0 765 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 TSC22D4Q9Y3Q8 395 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 HES2Q9Y543 173 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 APOC4-APOC2K7ER74 178 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 APOC2P02655 101 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 ERBB2P04626 1255 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 RALBP11234 206 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 CD19P15391 556 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 PROZP22891 400 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 MIPP30301 263 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 ALDH3B2P48448 385 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 GTF2A2P52657 109 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 CDH6P55285 790 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 ABCE1P61221 599 aaKnown RBP14.4□□□□□ -0.1
SF1-201ENST00000227503 IER5Q5VY09 327 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 FAM160B1Q5W0V3 765 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 POTEAQ6S8J7 498 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 CYP2R1Q6VVX0 501 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 RAVER1Q8IY67 606 aaKnown RBP14.4□□□□□ -0.1
SF1-201ENST00000227503 FAM47BQ8NA70 645 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 CHST13Q8NET6 341 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 CMASQ8NFW8 434 aaPredicted RBP14.4□□□□□ -0.1
SF1-201ENST00000227503 RSPH1Q8WYR4 309 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 THAP11Q96EK4 314 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 PTPRHQ9HD43 1115 aa14.4□□□□□ -0.1
SF1-201ENST00000227503 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.4□□□□□ -0.1
SF1-201ENST00000227503 NXF1Q9UBU9 619 aaKnown RBP14.4□□□□□ -0.1
SF1-201ENST00000227503 BPTFQ12830 3046 aa14.39□□□□□ -0.11
SF1-201ENST00000227503 LSM1O15116 133 aaKnown RBP14.39□□□□□ -0.11
SF1-201ENST00000227503 GRAP2O75791 330 aa14.39□□□□□ -0.11
SF1-201ENST00000227503 SERPINE1P05121 402 aa14.39□□□□□ -0.11
SF1-201ENST00000227503 CHRNGP07510 517 aa14.39□□□□□ -0.11
SF1-201ENST00000227503 CD151P48509 253 aa14.39□□□□□ -0.11
SF1-201ENST00000227503 CYP2A13Q16696 494 aa14.39□□□□□ -0.11
SF1-201ENST00000227503 MAP7D1Q3KQU3 841 aa14.39□□□□□ -0.11
SF1-201ENST00000227503 PIGGQ5H8A4 983 aa14.39□□□□□ -0.11
SF1-201ENST00000227503 ZNF772Q68DY9 489 aaPredicted RBP14.39□□□□□ -0.11
SF1-201ENST00000227503 SMYD5Q6GMV2 418 aa14.39□□□□□ -0.11
SF1-201ENST00000227503 C16orf87Q6PH81 154 aa14.39□□□□□ -0.11
SF1-201ENST00000227503 CHST15Q7LFX5 561 aaPredicted RBP14.39□□□□□ -0.11
SF1-201ENST00000227503 PCDH20Q8N6Y1 951 aaKnown RBP14.39□□□□□ -0.11
SF1-201ENST00000227503 RNF149Q8NC42 400 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms