RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 MCF2P10911 925 aa17.58■□□□□ 0.41
H2AFV-201ENST00000222690 XRCC1P18887 633 aaPredicted RBP17.58■□□□□ 0.41
H2AFV-201ENST00000222690 NIPAL4Q0D2K0 466 aa17.58■□□□□ 0.41
H2AFV-201ENST00000222690 BNC2Q6ZN30 1099 aaPredicted RBP17.58■□□□□ 0.41
H2AFV-201ENST00000222690 KYQ8NBH2 561 aa17.58■□□□□ 0.41
H2AFV-201ENST00000222690 CEP70Q8NHQ1 597 aa17.58■□□□□ 0.41
H2AFV-201ENST00000222690 FCRL3Q96P31 734 aaPredicted RBP17.58■□□□□ 0.41
H2AFV-201ENST00000222690 STN1Q9H668 368 aaKnown RBP17.58■□□□□ 0.41
H2AFV-201ENST00000222690 NMRAL1Q9HBL8 299 aa17.58■□□□□ 0.41
H2AFV-201ENST00000222690 SNTG2Q9NY99 539 aa17.58■□□□□ 0.41
H2AFV-201ENST00000222690 NRF1Q16656 503 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 POTEAQ6S8J7 498 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 EXOC8Q8IYI6 725 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 ZNF567Q8N184 647 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 GATA5Q9BWX5 397 aaPredicted RBP17.58■□□□□ 0.4
H2AFV-201ENST00000222690 VPS33BQ9H267 617 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 SEMA6AQ9H2E6 1030 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.58■□□□□ 0.4
H2AFV-201ENST00000222690 AP4B1Q9Y6B7 739 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 GABBR2O75899 941 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 PIGNO95427 931 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 C2P06681 752 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 ZNF286BP0CG31 522 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 MAGEA6P43360 314 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 RABGGTBP53611 331 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 CERCAMQ5T4B2 595 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 PGM2L1Q6PCE3 622 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 DNAJC5Q9H3Z4 198 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 MTMR10Q9NXD2 777 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 TUBGCP4Q9UGJ1 667 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 KIAA1257Q9ULG3 409 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 VANGL2Q9ULK5 521 aa17.58■□□□□ 0.4
H2AFV-201ENST00000222690 THRAP10827 490 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 SERPINB8P50452 374 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 COG7P83436 770 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 CYLC2Q14093 348 aaPredicted RBP17.57■□□□□ 0.4
H2AFV-201ENST00000222690 SEL1L3Q68CR1 1132 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 DSELQ8IZU8 1212 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.57■□□□□ 0.4
H2AFV-201ENST00000222690 SLC2A14Q8TDB8 520 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 KLK14Q9P0G3 267 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 MTTPP55157 894 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 CDK18Q07002 472 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 KIZQ2M2Z5 673 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 KDELC2Q7Z4H8 507 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 ACVR1CQ8NER5 493 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 RNF139Q8WU17 664 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 SLC35F5Q8WV83 523 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 KLRG1Q96E93 195 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 MPHOSPH6Q99547 160 aaKnown RBP17.57■□□□□ 0.4
H2AFV-201ENST00000222690 PCDHB12Q9Y5F1 795 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.57■□□□□ 0.4
H2AFV-201ENST00000222690 M0QYT0 321 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 FGFR3P22607 806 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 KCTD2Q14681 263 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 ADGRG6Q86SQ4 1221 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 URGCPQ8TCY9 931 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 USP33Q8TEY7 942 aa17.57■□□□□ 0.4
H2AFV-201ENST00000222690 HNRNPRO43390 633 aaKnown RBP17.56■□□□□ 0.4
H2AFV-201ENST00000222690 CSPG5O95196 566 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 MYL4P12829 197 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 LMO2P25791 158 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 MPP3Q13368 585 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 HNRNPDQ14103 355 aaKnown RBP17.56■□□□□ 0.4
H2AFV-201ENST00000222690 USP10Q14694 798 aaKnown RBP17.56■□□□□ 0.4
H2AFV-201ENST00000222690 LSM12Q3MHD2 195 aaKnown RBP17.56■□□□□ 0.4
H2AFV-201ENST00000222690 CCDC153Q494R4 210 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 IL31Q6EBC2 164 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 LBX2Q6XYB7 198 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 TMEM110Q86TL2 294 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 C12orf42Q96LP6 360 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 CPNE1Q99829 537 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 OMDQ99983 421 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 SLC4A5Q9BY07 1137 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 PIM2Q9P1W9 311 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 PSMD13Q9UNM6 376 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 PABPC4LP0CB38 370 aaKnown RBP17.56■□□□□ 0.4
H2AFV-201ENST00000222690 INCA1Q0VD86 236 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 ADIGQ0VDE8 80 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 OTUD5Q96G74 571 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 PHF12Q96QT6 1004 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 SNX25Q9H3E2 840 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 CHRAC1Q9NRG0 131 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 COL11A1P12107 1806 aaPredicted RBP17.56■□□□□ 0.4
H2AFV-201ENST00000222690 IGKV6-21A0A0C4DH24 114 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 DPYSL4O14531 572 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 GRIA4P48058 902 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 PDK1Q15118 436 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 GRTP1Q5TC63 336 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 C16orf89Q6UX73 402 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 KBTBD6Q86V97 674 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 NPAS2Q99743 824 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 RTKNQ9BST9 563 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 LRRC40Q9H9A6 602 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 ERAP1Q9NZ08 941 aa17.56■□□□□ 0.4
H2AFV-201ENST00000222690 H3BNX3 289 aa17.55■□□□□ 0.4
H2AFV-201ENST00000222690 PFDN1O60925 122 aa17.55■□□□□ 0.4
H2AFV-201ENST00000222690 MT-CO1P00395 513 aa17.55■□□□□ 0.4
H2AFV-201ENST00000222690 PRKCGP05129 697 aa17.55■□□□□ 0.4
H2AFV-201ENST00000222690 ARL13AQ5H913 290 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms