RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 CarfQ8VHI4 689 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Sorcs3Q8VI51 1219 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Prkag2Q91WG5 566 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Dok4Q99KE3 325 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Zmat2Q9CPW7 199 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Psmd8Q9CX56 353 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Aldh1b1Q9CZS1 519 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 PirQ9D711 290 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 1700080O16RikQ9D9G4 284 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Pgam1Q9DBJ1 254 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Atp13a1Q9EPE9 1200 aaKnown RBP11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Tmod3Q9JHJ0 352 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Tbk1Q9WUN2 729 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 S1pr4Q9Z0L1 386 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Shcbp1Q9Z179 668 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Gm44511A0A0N4SW10 223 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 OmdO35103 423 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 AvilO88398 819 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Cd3gP11942 182 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Ikzf1Q03267 517 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Coq10bQ3THF9 240 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Snx27Q3UHD6 539 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Q5XFZ0 217 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Papd5Q68ED3 633 aaKnown RBP11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Fnip2Q80TD3 1108 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 AA792892Q8C6S1 278 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Fnbp1lQ8K012 605 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Tcaf2Q921K8 919 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Prorsd1Q9D820 169 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Dnajc12Q9R022 198 aa11.82□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Mindy4b-psA0A1W2P7H6 457 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Pramef17A2ASJ1 475 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Olfr652B9EHE6 318 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Gm10721J3QPJ9 223 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Edil3O35474 480 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Casp2P29594 452 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Ak8Q32M07 479 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 E330034G19RikQ3UWX6 351 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Kirrel2Q7TSU7 700 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Wscd1Q80XH4 572 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Bhlhe22Q8C6A8 355 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Alas1Q8VC19 642 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Pcdh18Q8VHR0 1134 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Pgm3Q9CYR6 542 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Fndc8Q9D2H8 321 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Psmd12Q9D8W5 456 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Serpina1fQ9DCQ7 411 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Rasgrp2Q9QUG9 608 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Nrf1Q9WU00 503 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Bscl2Q9Z2E9 383 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Gm21731A0A286YDE9 180 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Zmynd8A2A484 1235 aaKnown RBP11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 C1qbpO35658 278 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Klc2O88448 599 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 LtfP08071 707 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Q3U4G0 281 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Etaa1Q5SVT3 877 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 PhgdhQ61753 533 aaKnown RBP11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Il17aQ62386 158 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Tcaf3Q6QR59 914 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Armc12Q80X86 340 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 4930503B20RikQ80ZP0 234 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Ireb2Q811J3 963 aaKnown RBP11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Slc36a3Q811P0 477 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Cgrrf1Q8BMJ7 332 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Cabcoco1Q8CDT7 208 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Ccdc63Q8CDV6 558 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Nkiras1Q8CEC5 192 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Prpf39Q8K2Z2 665 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Fam114a2Q8VE88 497 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Olfr356Q8VFP5 315 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 HnmtQ91VF2 295 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Creld1Q91XD7 420 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Cyp4f14Q9EP75 524 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Dpp7Q9ET22 506 aa11.81□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Vmn2r100E9QAZ9 850 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Klhl33G3UW92 533 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Hmgxb3G3X9M3 1254 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Pold2O35654 469 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Mllt10O54826 1068 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Dnmt3aO88508 908 aaKnown RBP11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Fbp2P70695 339 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 PgrQ00175 926 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Pecam1Q08481 727 aaKnown RBP11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 AcdQ5EE38 416 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 9930111J21Rik1Q5SVP0 844 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Slc20a1Q61609 681 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Pan2Q8BGF7 1200 aaKnown RBP11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Zdhhc15Q8BGJ0 337 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Prr33Q8C494 260 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 ClmnQ8C5W0 1052 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Adam32Q8K410 754 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Slc36a1Q8K4D3 475 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Pcdhb6Q91XZ4 772 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Trem2Q99NH8 227 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Fam136aQ9CR98 138 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Chit1Q9D7Q1 464 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Gpr45Q9EQQ4 373 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Strn3Q9ERG2 796 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Ddx21Q9JIK5 851 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms