RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Ebf2O08792 575 aa11.22□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Ptgs1P22437 602 aa11.22□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Armc7Q3UJZ3 198 aa11.22□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Hdgfl2Q3UMU9 669 aa11.22□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Usp28Q5I043 1051 aa11.22□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Ints6Q6PCM2 883 aa11.22□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Wdr48Q8BH57 676 aa11.22□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Naa30Q8CES0 364 aa11.22□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Clptm1Q8VBZ3 664 aa11.22□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Slc12a6Q924N4 1150 aa11.22□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Efhd1Q9D4J1 240 aa11.22□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Gbp2Q9Z0E6 589 aa11.22□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 AtrxQ61687 2476 aaKnown RBP11.22□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 A0A286YDP4 300 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Fam184aE9PW83 1143 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Lhx8O35652 367 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Anxa6P14824 673 aaKnown RBP11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Kif2aP28740 705 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Ckmt1P30275 418 aaKnown RBP11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Gad1P48318 593 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Mc4rP56450 332 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 CxadrP97792 365 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Trim72Q1XH17 477 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Fahd2Q3TC72 313 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Traf3Q60803 567 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Tsg101Q61187 391 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Ctdp1Q7TSG2 960 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Gpbar1Q80SS6 329 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Trim65Q8BFW4 522 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Zscan22Q8BGS5 496 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Hook1Q8BIL5 728 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Nop53Q8BK35 484 aaKnown RBP11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Acsl5Q8JZR0 683 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 TmieQ8K467 153 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Nup85Q8R480 656 aaKnown RBP11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Eps8l1Q8R5F8 716 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Rab7bQ8VEA8 199 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Mettl13Q91YR5 698 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Rhobtb3Q9CTN4 611 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Slc7a9Q9QXA6 487 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Igbp1bQ9QZ29 343 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Lbx2Q9WUN8 195 aa11.21□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Ccdc112A0AUP1 442 aa11.21□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Adam34A2RSG8 714 aa11.21□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Tcte1A6H639 498 aa11.21□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Serpina3jD3Z451 420 aa11.21□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Tgfbr3O88393 850 aa11.21□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Slc7a10P63115 530 aa11.21□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Pfkfb1P70266 471 aa11.21□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Arglu1Q3UL36 271 aaKnown RBP11.21□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Clec4a4Q5YIR8 236 aa11.21□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Msi1Q61474 362 aaKnown RBP11.21□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Mef2dQ63943 514 aa11.21□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Krt39Q6IFX4 482 aa11.21□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Olfr670Q7TRP3 312 aa11.21□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Zswim7Q9CWQ2 152 aa11.21□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 LrgukQ9D5S7 820 aa11.21□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Tmem9bQ9JJR8 199 aa11.21□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 CpqQ9WVJ3 470 aa11.21□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Gadd45gQ9Z111 159 aa11.21□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Plxnb1Q8CJH3 2119 aa11.21□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Gcn1E9PVA8 2671 aaKnown RBP11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 2210011C24RikA0A087WQ89 206 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Klhl18A0A0G2JGN5 579 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Gm45208A0A140LJ36 292 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Znf804aA2AKY4 1200 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Zfp597E9Q6S0 419 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Slc22a2O70577 553 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Ms4a1P19437 291 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Ceacam1P31809 521 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Cetn1P41209 172 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Pcbp4P57724 403 aaKnown RBP11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Acot6Q32Q92 419 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Gm853Q3UNZ2 425 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Klra6Q60653 266 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Klhl5Q6PFE1 708 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Atp1a3Q6PIC6 1013 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Clec2eQ80XD9 204 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Skida1Q80YR3 822 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Rec8Q8C5S7 591 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 NotumQ8R116 503 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 MrgprgQ91ZB5 289 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Marveld3Q9D956 376 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Trip4Q9QXN3 581 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 CtswP56203 371 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Bex6Q3TZW7 114 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Akt2Q60823 481 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Map2k2Q63932 401 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Atg16l2Q6KAU8 623 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Znf280cQ6P3Y5 742 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Nap1l3Q794H2 544 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Slc34a3Q80SU6 601 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Adamts4Q8BNJ2 833 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Cc2d1bQ8BRN9 848 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Znf451Q8C0P7 1056 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Ulbp1Q8HWA3 334 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Wnt9aQ8R5M2 365 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Mospd1Q8VEL0 213 aa11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 Rps21Q9CQR2 83 aaKnown RBP11.2□□□□□ -0.62
Ccdc60-202ENSMUST00000086483 RangrfQ9JIB0 185 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms