RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Nadsyn1Q711T7 725 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Rnf152Q8BG47 203 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Klhl24Q8BRG6 600 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Scyl2Q8CFE4 930 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ero1aQ8R180 464 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Q91W34 466 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Bhmt2Q91WS4 363 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Fastkd2Q922E6 689 aaKnown RBP9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Q99KU6 348 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Cyp4f16Q99N17 524 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Bco2Q99NF1 532 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Prps2Q9CS42 318 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tob2Q9JM55 345 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm43638A0A0J9YU36 694 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm2022A0A1Y7VLT7 144 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm7535F7CXE4 302 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm2075J3QMW5 144 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm6803J3QPI8 144 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm10436L7N1Y3 520 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Snap23O09044 210 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Kcnc1P15388 511 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Cdc25bP30306 576 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Smarcad1Q04692 1021 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ubxn2bQ0KL01 331 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tgtp2Q3T9E4 415 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 BB287469Q3UT53 144 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 TmpoQ61033 693 aaKnown RBP9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tgtp1Q62293 415 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Syn2Q64332 586 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Dcaf5Q80T85 946 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Exoc3l1Q8BI71 739 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Fbxw8Q8BIA4 598 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Prune1Q8BIW1 454 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Trmt2aQ8BNV1 574 aaKnown RBP9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Arf2Q8BSL7 181 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Smoc2Q8CD91 447 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Csnka2ipQ8CH19 720 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 B3gnt8Q8R3I9 389 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Rhbdl1Q8VC82 373 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Olfr390Q8VEZ7 311 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 PclafQ9CQX4 110 aaKnown RBP9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Trpc4Q9QUQ5 974 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Hsf4Q9R0L1 492 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Cib1Q9Z0F4 191 aa9.3□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tjp1P39447 1745 aaKnown RBP9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Olfr1555-ps1A0A140LHT7 321 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm13023A2A8N2 498 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm10406A6NAS4 205 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm3373A6NAS7 205 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm42791D3YYB5 209 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm3298E9PW80 205 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm5795E9PZN8 263 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm2237E9Q501 211 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 PtproE9Q612 1226 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 1700080E11RikE9Q9G1 206 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm20604F8WIA3 75 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm10338K7N692 204 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm3591K7N6X2 186 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm3667K7N757 205 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm3239L7N2D9 227 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 P04224 255 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Hoxa6P09092 232 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Lamp2P17047 415 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Slc7a2P18581 657 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Hoxd8P23463 289 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 S100a9P31725 113 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ppm1bP36993 390 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ypel5P62700 121 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Cds1P98191 461 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Scg2Q03517 617 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Igsf9Q05BQ1 1179 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 CamkmtQ3U2J5 323 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tbrg1Q3UB74 406 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 EspnlQ3UYR4 1005 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ttc9Q3V038 219 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm3558Q5FWC9 205 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Pik3r5Q5SW28 871 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Cdkn2cQ60772 168 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Cct6bQ61390 531 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Podnl1Q6P3Y9 559 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Garem2Q6PAJ3 880 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tcaf3Q6QR59 914 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Daam2Q80U19 1115 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Rasgef1bQ8JZL7 473 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Pla1aQ8VI78 456 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 WwoxQ91WL8 414 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 CmasQ99KK2 432 aaKnown RBP9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Fbxo32Q9CPU7 355 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Elp3Q9CZX0 547 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Erp44Q9D1Q6 406 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Nek6Q9ES70 313 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Rai2Q9QVY8 529 aa9.29□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Mterf1bB9EJ57 379 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm10800D3Z496 220 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 FancfE9Q5Z5 343 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Oas2E9Q9A9 742 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tekt5G5E8A8 557 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 NumblO08919 604 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Hoxb3P09026 433 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Kcna3P16390 528 aa9.28□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms