RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Ddi2A2ADY9 399 aa12.15□□□□□ -0.47
Trim56-201ENSMUST00000054384 Lgr4A2ARI4 951 aa12.15□□□□□ -0.47
Trim56-201ENSMUST00000054384 Clcn3P51791 818 aa12.15□□□□□ -0.47
Trim56-201ENSMUST00000054384 NfycP70353 335 aa12.15□□□□□ -0.47
Trim56-201ENSMUST00000054384 Svs6Q64356 99 aa12.15□□□□□ -0.47
Trim56-201ENSMUST00000054384 Mapre3Q6PER3 281 aa12.15□□□□□ -0.47
Trim56-201ENSMUST00000054384 Fbxo10Q7TQF2 950 aa12.15□□□□□ -0.47
Trim56-201ENSMUST00000054384 SvopQ8BFT9 548 aa12.15□□□□□ -0.47
Trim56-201ENSMUST00000054384 Foxo4Q9WVH3 505 aa12.15□□□□□ -0.47
Trim56-201ENSMUST00000054384 Slc9a5B2RXE2 898 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Vmn2r1O70410 912 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Cdk7Q03147 346 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Trmt1Q3TX08 663 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Akr1clQ3UXL1 322 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ccdc28bQ8CEG5 200 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ccr4P51680 360 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 MylpfP97457 169 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Larp7Q05CL8 570 aaKnown RBP12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gprin1Q3UNH4 932 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Scn2bQ56A07 215 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 SugctQ7TNE1 436 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ube3cQ80U95 1083 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Epm2aip1Q8VEH5 606 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Tmco1Q921L3 188 aaKnown RBP12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ddi1Q9DAF3 408 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gm17175E9Q528 179 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Kpna6O35345 536 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Acot1O55137 419 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 H2afxP27661 143 aaKnown RBP12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Itga4Q00651 1039 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Rapgefl1Q68EF8 662 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Q6GQV0 436 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gsdmc3Q8CB12 480 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Eif3mQ99JX4 374 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Arhgef28P97433 1693 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gm6465F7A7Y6 181 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 ItgadQ3V0T4 1168 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Olfr169Q7TS53 313 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Tlcd1Q99JT6 247 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Snx29Q9D3S3 818 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Kiaa1210E9Q0C6 1637 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Dip2aQ8BWT5 1523 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 AV320801A2AWL3 467 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gm15023L7MUB4 467 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gria1P23818 907 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ccnb1P24860 430 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 D630036H23RikQ3UQD6 204 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ssh3Q8K330 649 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 CrebzfQ91ZR3 358 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Exosc4Q921I9 245 aaKnown RBP12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Q9CXL3 195 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Spin2-ps6A0A140T8V2 174 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Tnfrsf25B1AWN9 411 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Vmn2r39L7N2E5 861 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 FaahO08914 579 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Cdc42P60766 191 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Rfwd3Q8CIK8 774 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 CatsperzQ9CQP8 194 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Bcl2l12Q9D3J3 255 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Vnn3Q9QZ25 500 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Myo18aQ9JMH9 2050 aaKnown RBP12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 MrasO08989 208 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 DcxO88809 366 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 RapsnP12672 412 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Nr2c2P49117 596 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Tyw1Q8BJM7 721 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Trappc12Q8K2L8 797 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 PolbQ8K409 335 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Colec12Q8K4Q8 742 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Pcdhac1Q91Y10 964 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Rfc5Q9D0F6 339 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Pdpk1Q9Z2A0 559 aa12.14□□□□□ -0.47
Trim56-201ENSMUST00000054384 Magea6O89010 325 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 PfklP12382 780 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Fam131bQ3TY60 332 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Magea3Q6T340 320 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 WdpcpQ8C456 722 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Armcx6Q8K3A6 301 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Tmed5Q9CXE7 229 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Dennd6bQ9D9V7 585 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Cyb561d2Q9WUE3 222 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Fbxl18E9PYR1 771 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 DctP29812 517 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Elk3P41971 409 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Cdk16Q04735 496 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Txndc8Q69AB2 127 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Usp49Q6P9L4 685 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Olfr295Q7TS08 309 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Mab21L3Q8CI17 429 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Afg3l2Q8JZQ2 802 aaKnown RBP12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Slc9a8Q8R4D1 576 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Sgsm3Q8VCZ6 750 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ttc39cQ8VE09 580 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Pcdhgb5Q91XX5 926 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Cab39lQ9DB16 337 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Slc16a6B1AT66 607 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ccnb1ip1D3Z3K2 276 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Pla2g6P97819 807 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Zcchc2Q69ZB8 1166 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Copz1P61924 177 aa12.13□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 54 ms