RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 4930430A15RikQ05AC5 485 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Trim35Q8C006 501 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Fam83aQ8K2P2 436 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Myoz3Q8R4E4 245 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 MrgpreQ91ZB7 310 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Sgf29Q9DA08 293 aaKnown RBP16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 PdiltQ9DAN1 588 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Cul3Q9JLV5 768 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Dlc1Q9R0Z9 1092 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Bmp15Q9Z0L4 392 aa16.37■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Gm36028A0A0U1RPM1 299 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 ChrngP04760 519 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Ptpn1P35821 432 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 ItgavP43406 1044 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 P3h1Q3V1T4 739 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Cyb5d1Q5NCY3 228 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Als2clQ60I26 952 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Gstt1Q64471 240 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 RetsatQ64FW2 609 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Mark4Q8CIP4 752 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Lrrc56Q8K375 552 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Evi2bQ8VD58 444 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Pcdhb13Q91Y06 796 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Tmem86aQ9D8N3 241 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Timp4Q9JHB3 224 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Gm44511A0A0N4SW10 223 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Cyp2a22B2RXZ2 492 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Gm8113E0CXS8 587 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Chrna4O70174 629 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Hsd17b7O88736 334 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Alas2P08680 587 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Klrb1bP27812 223 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Ccna2P51943 422 aaKnown RBP16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Rnf157Q3TEL6 685 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Pik3r6Q3U6Q4 756 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Slc16a10Q3U9N9 512 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Grm5Q3UVX5 1203 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Map3k7Q62073 579 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Kcns3Q8BQZ8 491 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Zfp398Q8BV16 643 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Washc5Q8C2E7 1159 aaKnown RBP16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Sept10Q8C650 452 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 CherpQ8CGZ0 936 aaKnown RBP16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 MiosQ8VE19 875 aa16.36■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Rhox3fA2ANE1 215 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Ccdc175E9PVB3 822 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Znf683I7HJS4 458 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Krt6aP50446 553 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Ythdf1P59326 559 aaKnown RBP16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 RgnQ64374 299 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Cd300lfQ6SJQ7 337 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Kansl2Q8BQR4 486 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Q8R1Y2 203 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 StambpQ9CQ26 424 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Mphosph6Q9D1Q1 161 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Pold3Q9EQ28 462 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Ddx21Q9JIK5 851 aaKnown RBP16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Rbck1Q9WUB0 508 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 A630010A05RikA9C473 232 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Ccdc144bE9PVZ3 520 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Dpysl2O08553 572 aaKnown RBP16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Prl3b1P09586 222 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 ChgbP16014 677 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Abce1P61222 599 aaKnown RBP16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 NxnP97346 435 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Grid2ipQ0QWG9 1203 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Gpr15Q0VDU3 360 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Meaf6Q2VPQ9 191 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Vps51Q3UVL4 782 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Gpr65Q61038 337 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Znf235Q61116 645 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Polr2eQ80UW8 210 aaKnown RBP16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Lrrc27Q80YS5 523 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Gabra5Q8BHJ7 463 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Zmiz2Q8CIE2 920 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 DarsQ922B2 501 aaKnown RBP16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Them5Q9CQJ0 248 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 4933428M09RikQ9D3X3 192 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Olfr711Q9EPG2 314 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Znhit2Q9QY66 399 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Shcbp1Q9Z179 668 aa16.35■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Olfr1023A2ASU6 311 aa16.34■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Cd2P08920 344 aa16.34■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Mks1Q5SW45 561 aa16.34■□□□□ 0.21
Ckap4-201ENSMUST00000053871 PtprrQ62132 656 aa16.34■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Avpr1aQ62463 423 aa16.34■□□□□ 0.21
Ckap4-201ENSMUST00000053871 RubcnQ80U62 956 aa16.34■□□□□ 0.21
Ckap4-201ENSMUST00000053871 SybuQ8BHS8 665 aa16.34■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Rftn2Q8CHX7 500 aa16.34■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Slco4a1Q8K078 723 aa16.34■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Acot13Q9CQR4 140 aa16.34■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Arpc2Q9CVB6 300 aa16.34■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Scamp5Q9JKD3 235 aa16.34■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Bub1bQ9Z1S0 1052 aa16.34■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Rad51ap2G3UW63 976 aa16.34■□□□□ 0.21
Ckap4-201ENSMUST00000053871 BC024978J3QPC3 361 aa16.34■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Gm7942L7N277 499 aa16.34■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Cldn5O54942 218 aa16.34■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Klc2O88448 599 aa16.34■□□□□ 0.21
Ckap4-201ENSMUST00000053871 Brcc3P46737 291 aa16.34■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms