RNA–Protein interactions for RNA: ENSMUST00000022623.12

Trim35-201, Transcript of Tripartite motif-containing protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim35, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35-201ENSMUST00000022623 Mis18bp1Q80WQ8 998 aa12.05□□□□□ -0.48
Trim35-201ENSMUST00000022623 Sugp1Q8CH02 643 aaKnown RBP12.05□□□□□ -0.48
Trim35-201ENSMUST00000022623 TwnkQ8CIW5 685 aa12.05□□□□□ -0.48
Trim35-201ENSMUST00000022623 Dtnbp1Q91WZ8 352 aa12.05□□□□□ -0.48
Trim35-201ENSMUST00000022623 Psip1Q99JF8 528 aaKnown RBP12.05□□□□□ -0.48
Trim35-201ENSMUST00000022623 Tpgs1Q99MS8 303 aa12.05□□□□□ -0.48
Trim35-201ENSMUST00000022623 QpctQ9CYK2 362 aa12.05□□□□□ -0.48
Trim35-201ENSMUST00000022623 Tmem81Q9D5K1 259 aa12.05□□□□□ -0.48
Trim35-201ENSMUST00000022623 Timp4Q9JHB3 224 aa12.05□□□□□ -0.48
Trim35-201ENSMUST00000022623 MkksQ9JI70 570 aa12.05□□□□□ -0.48
Trim35-201ENSMUST00000022623 PapolbQ9WVP6 641 aa12.05□□□□□ -0.48
Trim35-201ENSMUST00000022623 Ttll3A4Q9E5 927 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Akap5D3YVF0 745 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Scg3P47867 471 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Tekt4Q149S1 447 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Tmem45aQ60774 273 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Mapre1Q61166 268 aaKnown RBP12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Zfp759Q7M6X3 721 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Olfr1505Q7TQQ2 316 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Fnip2Q80TD3 1108 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 OlahQ8R197 265 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Q922M7 232 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Dnajb4Q9D832 337 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 PatjQ63ZW7 1834 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Zfp612A0A1D5RMC2 672 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Lcn6A2AJB9 181 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Usp51B1AY15 661 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Itga9B8JK39 1036 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Cdr1E9Q0B4 517 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Raph1F2Z3U3 1266 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Cyp27b1O35084 507 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Edil3O35474 480 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Vps4bP46467 444 aaKnown RBP12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Ubtfl1Q3USZ2 394 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Olfr867Q7TRF3 331 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Pcdha3Q91Y16 942 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 AslQ91YI0 464 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Socs4Q91ZA6 436 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Ophn1Q99J31 802 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Spock2Q9ER58 423 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Mpp2Q9WV34 552 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Zgrf1Q0VGT4 1863 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Scgb2b21A0A087WQA9 112 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Mroh7A2AVR2 1279 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 GzmgP13366 248 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Sar1aP36536 198 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Ccna2P51943 422 aaKnown RBP12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Ccdc69Q3TCJ8 202 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Psg28Q4KL66 472 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Olfr1046Q7TR79 316 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 MogsQ80UM7 834 aaKnown RBP12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Ftsj1Q8CBC7 324 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Aldh4a1Q8CHT0 562 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Sgip1Q8VD37 806 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Ddx1Q91VR5 740 aaKnown RBP12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Rec114Q9CWH4 259 aa12.04□□□□□ -0.48
Trim35-201ENSMUST00000022623 Sh3pxd2bA2AAY5 908 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Ttll11A4Q9F4 727 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Smok3aC0HKC8 504 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Smok3bC0HKC9 504 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Ctbp1O88712 441 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Olfm1O88998 485 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 PdgfrbP05622 1098 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Wnt3aP27467 352 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Samd11Q1RNF8 542 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Cyp4f37Q3V1F1 546 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Atad5Q4QY64 1826 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Dnajc1Q61712 552 aaKnown RBP12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Gdpd5Q640M6 607 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Cpa1Q7TPZ8 419 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Atg16l1Q8C0J2 607 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Rnf208Q8K0W3 265 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Acad10Q8K370 1069 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Dedd2Q8QZV0 330 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Tm4sf4Q91XD3 202 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 B3galt6Q91Z92 325 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Rpl17Q9CPR4 184 aaKnown RBP12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Decr1Q9CQ62 335 aaKnown RBP12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Clcn2Q9R0A1 908 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Ttc7bE9Q6P5 843 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Abhd12bG3UZN6 359 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 CrymO54983 313 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Ces1cP23953 554 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Tlx1P43345 332 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Orc2Q60862 576 aaKnown RBP12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Xylt1Q811B1 953 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 PdhxQ8BKZ9 501 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Pggt1bQ8BUY9 377 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Zbtb8bQ8CII0 484 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Mkl1Q8K4J6 964 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Ace2Q8R0I0 805 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Tceal1Q921P9 165 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Kif12Q9D2Z8 642 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Kat2bQ9JHD1 813 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Mpp6Q9JLB0 553 aa12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 PfkpQ9WUA3 784 aaKnown RBP12.03□□□□□ -0.48
Trim35-201ENSMUST00000022623 Gm21964A0A1W2P7S4 437 aa12.02□□□□□ -0.48
Trim35-201ENSMUST00000022623 Vmn2r27D3YUK6 857 aa12.02□□□□□ -0.48
Trim35-201ENSMUST00000022623 Akr1b7P21300 316 aa12.02□□□□□ -0.48
Trim35-201ENSMUST00000022623 FpgsP48760 587 aa12.02□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 60.9 ms