RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Castor1Q9CWQ8 331 aa18.12■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Cdca7Q9D0M2 382 aa18.12■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Piwil1Q9JMB7 862 aa18.12■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 VapbQ9QY76 243 aaKnown RBP18.12■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Cib1Q9Z0F4 191 aa18.12■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Pold2O35654 469 aa18.12■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Hk1P17710 974 aa18.12■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 NxnP97346 435 aa18.12■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Rbm44Q3V089 1013 aa18.12■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Mef2aQ60929 498 aa18.12■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Supt20hQ7TT00 530 aaKnown RBP18.12■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Kansl2Q8BQR4 486 aa18.12■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 NeproQ8R2U2 564 aa18.12■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Wdr98Q8VC42 657 aa18.12■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Upk1aQ9D132 257 aa18.12■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Gm12394A2AKP6 982 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Tmem45a2B7ZWJ5 289 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Atf6F6VAN0 656 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 AlpiF8VPQ6 554 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Dnmt3cP0DOY1 709 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Krt6aP50446 553 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Gm4951Q3UED7 406 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Fam20cQ5MJS3 579 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Cnksr2Q80YA9 1032 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Slc44a2Q8BY89 706 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Asb14Q8C6Y6 587 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Slc35b4Q8CIA5 331 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Ankrd49Q8VE42 238 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 KlbQ99N32 1043 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Fiz1Q9WTJ4 500 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Klhl4B1AZR0 717 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Tatdn2B7ZNL9 783 aaKnown RBP18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 L1camP11627 1260 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Fmo3P97501 534 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Pgrmc2Q80UU9 217 aaKnown RBP18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Cdkn3Q810P3 211 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Ccdc32Q8BS39 179 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Colgalt1Q8K297 617 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Mkl1Q8K4J6 964 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Prpsap2Q8R574 369 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Tmem79Q9D709 391 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Arpc5lQ9D898 153 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Ccdc70Q9D9B0 223 aa18.11■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Olfr456B2RT27 312 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Mkrn2osD3Z393 217 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Gm10801F7C7Q0 168 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Dlx2P40764 332 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Foxk1P42128 719 aaKnown RBP18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Mxd1P50538 227 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Actr2P61161 394 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Cfhr2Q4LDF6 332 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Scaf8Q6DID3 1268 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Aqp12Q8CHJ2 290 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Lrit1Q8K099 624 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Ugt2b34Q8K154 532 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Olfr458Q8VF80 313 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Olfr457Q8VGP5 313 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Gprc5bQ923Z0 410 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Mrps17Q9CQE3 120 aaKnown RBP18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Krt20Q9D312 431 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Pgam1Q9DBJ1 254 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Map3k20Q9ESL4 802 aaKnown RBP18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 D3Z070 196 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Soat2O88908 525 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 LtfP08071 707 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Grm1P97772 1199 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Gbp10Q000W5 611 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Micall2Q3TN34 1009 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Mettl17Q3U2U7 461 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Gm1587Q3UT80 123 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Tfap2cQ61312 449 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Q8BHN7 327 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Cdh7Q8BM92 785 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Rap2cQ8BU31 183 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Ston2Q8BZ60 895 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 TiparpQ8C1B2 657 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Uba3Q8C878 462 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Nrbf2Q8VCQ3 287 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Spesp1Q9D5A0 399 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Spag6Q9JLI7 507 aa18.1■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Gm21083A0A0G2JFD5 256 aa18.09■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Cd151O35566 253 aa18.09■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 LgmnO89017 435 aa18.09■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Ptpn11P35235 597 aa18.09■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 St14P56677 855 aa18.09■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 SirpaP97797 513 aa18.09■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Ceacam5Q3UKK2 947 aa18.09■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 1810065E05RikQ5NC41 235 aa18.09■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Gm5431Q5NCB3 844 aa18.09■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 FAM120AQ6A0A9 1112 aaKnown RBP18.09■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Eif2s1Q6ZWX6 315 aaKnown RBP18.09■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Zbtb41Q811F1 908 aa18.09■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Ablim1Q8K4G5 861 aa18.09■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Slc30a5Q8R4H9 761 aa18.09■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Socs4Q91ZA6 436 aa18.09■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Med10Q9CXU0 135 aa18.09■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Shcbp1Q9Z179 668 aa18.09■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Pcna-ps2A0A140T8V5 261 aa18.09■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Clrn2B2RVW2 232 aa18.09■□□□□ 0.49
Sqstm1-201ENSMUST00000015981 Nlrp12E9Q5R7 1054 aa18.09■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms