RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	SBNO2	Q9Y2G9	1366 aa		21.33	■■□□□ 1
PHGDH-231	ENST00000641939	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	21.32	■■□□□ 1
PHGDH-231	ENST00000641939	CRYBG1	Q9Y4K1	1723 aa		21.32	■■□□□ 1
PHGDH-231	ENST00000641939	CDK12	Q9NYV4	1490 aa	Predicted RBP	21.32	■■□□□ 1
PHGDH-231	ENST00000641939	RBM6	P78332	1123 aa	Known RBP	21.31	■■□□□ 1
PHGDH-231	ENST00000641939	TRPC5	Q9UL62	973 aa	Predicted RBP	21.31	■■□□□ 1
PHGDH-231	ENST00000641939	TIMELESS	Q9UNS1	1208 aa		21.31	■■□□□ 1
PHGDH-231	ENST00000641939	BCL9L	Q86UU0	1499 aa		21.31	■■□□□ 1
PHGDH-231	ENST00000641939	CABP1	Q9NZU7	370 aa		21.3	■■□□□ 1
PHGDH-231	ENST00000641939	ATRN	O75882	1429 aa		21.29	■■□□□ 1
PHGDH-231	ENST00000641939	SLIT2	O94813	1529 aa		21.29	■■□□□ 1
PHGDH-231	ENST00000641939	PLCH1	Q4KWH8	1693 aa		21.29	■■□□□ 1
PHGDH-231	ENST00000641939	NWD2	Q9ULI1	1742 aa		21.29	■■□□□ 1
PHGDH-231	ENST00000641939	ATAD2	Q6PL18	1390 aa		21.27	■■□□□ 1
PHGDH-231	ENST00000641939	CCER1	Q8TC90	406 aa	Predicted RBP	21.27	■■□□□ 1
PHGDH-231	ENST00000641939	PHRF1	Q9P1Y6	1649 aa	Known RBP	21.26	■□□□□ 0.99
PHGDH-231	ENST00000641939	BRD4	O60885	1362 aa	Predicted RBP	21.26	■□□□□ 0.99
PHGDH-231	ENST00000641939	AKAP12	Q02952	1782 aa		21.26	■□□□□ 0.99
PHGDH-231	ENST00000641939	UNC5CL	Q8IV45	518 aa		21.26	■□□□□ 0.99
PHGDH-231	ENST00000641939	RGS12	O14924	1447 aa		21.24	■□□□□ 0.99
PHGDH-231	ENST00000641939	USP6	P35125	1406 aa		21.24	■□□□□ 0.99
PHGDH-231	ENST00000641939	COL14A1	Q05707	1796 aa	Known RBP	21.24	■□□□□ 0.99
PHGDH-231	ENST00000641939	NUTM2G	Q5VZR2	741 aa		21.24	■□□□□ 0.99
PHGDH-231	ENST00000641939	ABTB2	Q8N961	1025 aa		21.24	■□□□□ 0.99
PHGDH-231	ENST00000641939	FAM83G	A6ND36	823 aa		21.23	■□□□□ 0.99
PHGDH-231	ENST00000641939	ST20-MTHFS	A0A0A6YYL1	179 aa		21.22	■□□□□ 0.99
PHGDH-231	ENST00000641939	ZNF692	Q9BU19	519 aa	Predicted RBP	21.21	■□□□□ 0.99
PHGDH-231	ENST00000641939	NRAP	Q86VF7	1730 aa		21.21	■□□□□ 0.99
PHGDH-231	ENST00000641939	GJD4	Q96KN9	370 aa	Predicted RBP	21.2	■□□□□ 0.98
PHGDH-231	ENST00000641939	TESK2	Q96S53	571 aa		21.2	■□□□□ 0.98
PHGDH-231	ENST00000641939	SSH2	Q76I76	1423 aa		21.2	■□□□□ 0.98
PHGDH-231	ENST00000641939	SLC24A1	O60721	1099 aa		21.19	■□□□□ 0.98
PHGDH-231	ENST00000641939	USP47	Q96K76	1375 aa		21.19	■□□□□ 0.98
PHGDH-231	ENST00000641939	NLRP13	Q86W25	1043 aa		21.18	■□□□□ 0.98
PHGDH-231	ENST00000641939	PUS7	Q96PZ0	661 aa	Known RBP	21.18	■□□□□ 0.98
PHGDH-231	ENST00000641939	PRDM11	Q9NQV5	511 aa		21.18	■□□□□ 0.98
PHGDH-231	ENST00000641939	CPSF1	Q10570	1443 aa	Known RBP	21.18	■□□□□ 0.98
PHGDH-231	ENST00000641939	GLI3	P10071	1580 aa		21.18	■□□□□ 0.98
PHGDH-231	ENST00000641939	NRK	Q7Z2Y5	1582 aa		21.18	■□□□□ 0.98
PHGDH-231	ENST00000641939	PIK3C2A	O00443	1686 aa		21.18	■□□□□ 0.98
PHGDH-231	ENST00000641939	MON2	Q7Z3U7	1717 aa		21.18	■□□□□ 0.98
PHGDH-231	ENST00000641939	VPS72	Q15906	364 aa		21.17	■□□□□ 0.98
PHGDH-231	ENST00000641939	BTG4	Q9NY30	223 aa		21.17	■□□□□ 0.98
PHGDH-231	ENST00000641939	USP19	O94966	1318 aa		21.17	■□□□□ 0.98
PHGDH-231	ENST00000641939	KIAA0232	Q92628	1395 aa		21.17	■□□□□ 0.98
PHGDH-231	ENST00000641939	ZC3H6	P61129	1189 aa	Known RBP	21.16	■□□□□ 0.98
PHGDH-231	ENST00000641939	KTN1	Q86UP2	1357 aa	Known RBP	21.15	■□□□□ 0.98
PHGDH-231	ENST00000641939	TMC1	Q8TDI8	760 aa		21.15	■□□□□ 0.98
PHGDH-231	ENST00000641939	TTC21B	Q7Z4L5	1316 aa		21.14	■□□□□ 0.97
PHGDH-231	ENST00000641939	NLRP6	P59044	892 aa		21.14	■□□□□ 0.97
PHGDH-231	ENST00000641939	TTC21A	Q8NDW8	1320 aa		21.13	■□□□□ 0.97
PHGDH-231	ENST00000641939	GC	P02774	474 aa		21.13	■□□□□ 0.97
PHGDH-231	ENST00000641939	CCDC9	Q9Y3X0	531 aa	Known RBP	21.13	■□□□□ 0.97
PHGDH-231	ENST00000641939	CD163L1	Q9NR16	1453 aa		21.13	■□□□□ 0.97
PHGDH-231	ENST00000641939	CHRNA2	Q15822	529 aa		21.12	■□□□□ 0.97
PHGDH-231	ENST00000641939	SLC12A5	Q9H2X9	1139 aa		21.12	■□□□□ 0.97
PHGDH-231	ENST00000641939	SLIT3	O75094	1523 aa		21.12	■□□□□ 0.97
PHGDH-231	ENST00000641939	CPD	O75976	1380 aa		21.11	■□□□□ 0.97
PHGDH-231	ENST00000641939	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	21.1	■□□□□ 0.97
PHGDH-231	ENST00000641939	UPF1	Q92900	1129 aa	Known RBP eCLIP	21.1	■□□□□ 0.97
PHGDH-231	ENST00000641939	BRWD3	Q6RI45	1802 aa		21.1	■□□□□ 0.97
PHGDH-231	ENST00000641939	NINL	Q9Y2I6	1382 aa		21.1	■□□□□ 0.97
PHGDH-231	ENST00000641939	TMF1	P82094	1093 aa		21.09	■□□□□ 0.97
PHGDH-231	ENST00000641939	TERF2IP	Q9NYB0	399 aa		21.09	■□□□□ 0.97
PHGDH-231	ENST00000641939	LMO7	Q8WWI1	1683 aa		21.09	■□□□□ 0.97
PHGDH-231	ENST00000641939	EP400	Q96L91	3159 aa		21.07	■□□□□ 0.96
PHGDH-231	ENST00000641939		A0A1W2PP64	1363 aa		21.07	■□□□□ 0.96
PHGDH-231	ENST00000641939	USP54	Q70EL1	1684 aa		21.06	■□□□□ 0.96
PHGDH-231	ENST00000641939	ONECUT3	O60422	494 aa	Predicted RBP	21.06	■□□□□ 0.96
PHGDH-231	ENST00000641939	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	21.06	■□□□□ 0.96
PHGDH-231	ENST00000641939	CAMTA1	Q9Y6Y1	1673 aa		21.05	■□□□□ 0.96
PHGDH-231	ENST00000641939	SPATA31A5	Q5VU36	1347 aa		21.05	■□□□□ 0.96
PHGDH-231	ENST00000641939	SPATA31A7	Q8IWB4	1347 aa		21.05	■□□□□ 0.96
PHGDH-231	ENST00000641939	EDC4	Q6P2E9	1401 aa	Known RBP	21.05	■□□□□ 0.96
PHGDH-231	ENST00000641939	SEPT12	Q8IYM1	358 aa		21.05	■□□□□ 0.96
PHGDH-231	ENST00000641939	STRN4	Q9NRL3	753 aa		21.04	■□□□□ 0.96
PHGDH-231	ENST00000641939	EVA1C	P58658	441 aa		21.03	■□□□□ 0.96
PHGDH-231	ENST00000641939	CDCA8	Q53HL2	280 aa		21.03	■□□□□ 0.96
PHGDH-231	ENST00000641939	KCNH5	Q8NCM2	988 aa		21.03	■□□□□ 0.96
PHGDH-231	ENST00000641939	COL18A1	P39060	1754 aa		21.02	■□□□□ 0.96
PHGDH-231	ENST00000641939	USP31	Q70CQ4	1352 aa		21.02	■□□□□ 0.96
PHGDH-231	ENST00000641939	ZBTB7C	A1YPR0	619 aa		21.02	■□□□□ 0.96
PHGDH-231	ENST00000641939	FAM98C	Q17RN3	349 aa	Known RBP	21.02	■□□□□ 0.96
PHGDH-231	ENST00000641939	AATK	Q6ZMQ8	1374 aa		21.01	■□□□□ 0.95
PHGDH-231	ENST00000641939	NME9	Q86XW9	330 aa		21.01	■□□□□ 0.95
PHGDH-231	ENST00000641939	SPATA31A1	Q5TZJ5	1347 aa		21.01	■□□□□ 0.95
PHGDH-231	ENST00000641939	NFAT5	O94916	1531 aa		21	■□□□□ 0.95
PHGDH-231	ENST00000641939	ZRANB1	Q9UGI0	708 aa		21	■□□□□ 0.95
PHGDH-231	ENST00000641939	COL5A2	P05997	1499 aa	Predicted RBP	21	■□□□□ 0.95
PHGDH-231	ENST00000641939	RGPD5	Q99666	1765 aa		21	■□□□□ 0.95
PHGDH-231	ENST00000641939	ANKRD36B	Q8N2N9	1353 aa		20.99	■□□□□ 0.95
PHGDH-231	ENST00000641939		A0A0G2JS52	829 aa		20.99	■□□□□ 0.95
PHGDH-231	ENST00000641939	SOX12	O15370	315 aa		20.99	■□□□□ 0.95
PHGDH-231	ENST00000641939	MYT1	Q01538	1121 aa		20.99	■□□□□ 0.95
PHGDH-231	ENST00000641939	THSD7A	Q9UPZ6	1657 aa		20.99	■□□□□ 0.95
PHGDH-231	ENST00000641939	EIF4G2	P78344	907 aa	Known RBP eCLIP	20.98	■□□□□ 0.95
PHGDH-231	ENST00000641939	LARP1	Q6PKG0	1096 aa	Known RBP	20.98	■□□□□ 0.95
PHGDH-231	ENST00000641939	ARHGEF25	Q86VW2	580 aa		20.98	■□□□□ 0.95
PHGDH-231	ENST00000641939	MYOM1	P52179	1685 aa		20.97	■□□□□ 0.95
PHGDH-231	ENST00000641939	KRT27	Q7Z3Y8	459 aa		20.97	■□□□□ 0.95

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms