RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 PARD3Q8TEW0 1356 aa22.19■■□□□ 1.14
SRRM4-204ENST00000641899 ABCA3Q99758 1704 aa22.18■■□□□ 1.14
SRRM4-204ENST00000641899 HIRIP3Q9BW71 556 aaPredicted RBP22.18■■□□□ 1.14
SRRM4-204ENST00000641899 ADGRB2O60241 1585 aa22.17■■□□□ 1.14
SRRM4-204ENST00000641899 MINK1Q8N4C8 1332 aaPredicted RBP22.17■■□□□ 1.14
SRRM4-204ENST00000641899 WASLO00401 505 aaPredicted RBP22.17■■□□□ 1.14
SRRM4-204ENST00000641899 STAC3Q96MF2 364 aa22.17■■□□□ 1.14
SRRM4-204ENST00000641899 RGPD1P0DJD0 1748 aa22.17■■□□□ 1.14
SRRM4-204ENST00000641899 FAM182BQ5T319 152 aa22.16■■□□□ 1.14
SRRM4-204ENST00000641899 DCAF8L1A6NGE4 600 aa22.15■■□□□ 1.14
SRRM4-204ENST00000641899 EZH2Q15910 746 aaKnown RBP22.15■■□□□ 1.14
SRRM4-204ENST00000641899 NBPF8Q3BBV2 869 aa22.15■■□□□ 1.14
SRRM4-204ENST00000641899 NBPF14Q5TI25 921 aa22.15■■□□□ 1.14
SRRM4-204ENST00000641899 RGPD8O14715 1765 aaPredicted RBP22.15■■□□□ 1.14
SRRM4-204ENST00000641899 NRAPQ86VF7 1730 aa22.14■■□□□ 1.14
SRRM4-204ENST00000641899 SPATA31A1Q5TZJ5 1347 aa22.14■■□□□ 1.14
SRRM4-204ENST00000641899 TRIM37O94972 964 aa22.14■■□□□ 1.13
SRRM4-204ENST00000641899 APBA3O96018 575 aa22.14■■□□□ 1.13
SRRM4-204ENST00000641899 EVA1CP58658 441 aa22.14■■□□□ 1.13
SRRM4-204ENST00000641899 PDE3BQ13370 1112 aa22.14■■□□□ 1.13
SRRM4-204ENST00000641899 TULP4Q9NRJ4 1543 aa22.14■■□□□ 1.13
SRRM4-204ENST00000641899 STRN4Q9NRL3 753 aa22.13■■□□□ 1.13
SRRM4-204ENST00000641899 CAMKK2Q96RR4 588 aa22.12■■□□□ 1.13
SRRM4-204ENST00000641899 KIAA0232Q92628 1395 aa22.11■■□□□ 1.13
SRRM4-204ENST00000641899 PRR36Q9H6K5 1346 aa22.1■■□□□ 1.13
SRRM4-204ENST00000641899 C11orf95C9JLR9 678 aaPredicted RBP22.1■■□□□ 1.13
SRRM4-204ENST00000641899 TRPM3Q9HCF6 1732 aaPredicted RBP22.1■■□□□ 1.13
SRRM4-204ENST00000641899 ALS2Q96Q42 1657 aa22.09■■□□□ 1.13
SRRM4-204ENST00000641899 BARGINQ6ZT62 677 aa22.08■■□□□ 1.13
SRRM4-204ENST00000641899 THSD7AQ9UPZ6 1657 aa22.07■■□□□ 1.12
SRRM4-204ENST00000641899 CHRNA2Q15822 529 aa22.07■■□□□ 1.12
SRRM4-204ENST00000641899 NUDT16Q96DE0 195 aaKnown RBP22.07■■□□□ 1.12
SRRM4-204ENST00000641899 USP35Q9P2H5 1018 aa22.07■■□□□ 1.12
SRRM4-204ENST00000641899 KDM2AQ9Y2K7 1162 aa22.07■■□□□ 1.12
SRRM4-204ENST00000641899 ATP7BP35670 1465 aa22.07■■□□□ 1.12
SRRM4-204ENST00000641899 ZC3H6P61129 1189 aaKnown RBP22.06■■□□□ 1.12
SRRM4-204ENST00000641899 DCAF11Q8TEB1 546 aa22.06■■□□□ 1.12
SRRM4-204ENST00000641899 PPP1R1BQ9UD71 204 aaPredicted RBP22.06■■□□□ 1.12
SRRM4-204ENST00000641899 ADGRB1O14514 1584 aa22.06■■□□□ 1.12
SRRM4-204ENST00000641899 YY1P25490 414 aa22.05■■□□□ 1.12
SRRM4-204ENST00000641899 THRAP3Q9Y2W1 955 aaKnown RBP22.04■■□□□ 1.12
SRRM4-204ENST00000641899 TCP11L2Q8N4U5 519 aa22.03■■□□□ 1.12
SRRM4-204ENST00000641899 SPON1Q9HCB6 807 aa22.03■■□□□ 1.12
SRRM4-204ENST00000641899 SSH2Q76I76 1423 aa22.01■■□□□ 1.11
SRRM4-204ENST00000641899 CCDC61Q9Y6R9 512 aa22.01■■□□□ 1.11
SRRM4-204ENST00000641899 TNS1Q9HBL0 1735 aaKnown RBP22■■□□□ 1.11
SRRM4-204ENST00000641899 ABTB2Q8N961 1025 aa22■■□□□ 1.11
SRRM4-204ENST00000641899 NUTM2GQ5VZR2 741 aa21.99■■□□□ 1.11
SRRM4-204ENST00000641899 CDK19Q9BWU1 502 aa21.99■■□□□ 1.11
SRRM4-204ENST00000641899 ACEP12821 1306 aa21.98■■□□□ 1.11
SRRM4-204ENST00000641899 NLRP13Q86W25 1043 aa21.97■■□□□ 1.11
SRRM4-204ENST00000641899 POLR3AO14802 1390 aaPredicted RBP21.97■■□□□ 1.11
SRRM4-204ENST00000641899 CPDO75976 1380 aa21.97■■□□□ 1.11
SRRM4-204ENST00000641899 KCNQ2O43526 872 aa21.96■■□□□ 1.11
SRRM4-204ENST00000641899 LARP1Q6PKG0 1096 aaKnown RBP21.96■■□□□ 1.11
SRRM4-204ENST00000641899 ITSN1Q15811 1721 aa21.96■■□□□ 1.11
SRRM4-204ENST00000641899 PLEKHG3A1L390 1219 aa21.95■■□□□ 1.1
SRRM4-204ENST00000641899 NINLQ9Y2I6 1382 aa21.95■■□□□ 1.1
SRRM4-204ENST00000641899 CRYBG1Q9Y4K1 1723 aa21.94■■□□□ 1.1
SRRM4-204ENST00000641899 RAB3GAP2Q9H2M9 1393 aa21.93■■□□□ 1.1
SRRM4-204ENST00000641899 GCP02774 474 aa21.91■■□□□ 1.1
SRRM4-204ENST00000641899 PHRF1Q9P1Y6 1649 aaKnown RBP21.91■■□□□ 1.1
SRRM4-204ENST00000641899 BRD4O60885 1362 aaPredicted RBP21.9■■□□□ 1.1
SRRM4-204ENST00000641899 USP19O94966 1318 aa21.9■■□□□ 1.1
SRRM4-204ENST00000641899 OVOS2A0A0G2JMS6 1433 aa21.89■■□□□ 1.1
SRRM4-204ENST00000641899 OVOS2A0A0J9YW53 1432 aa21.89■■□□□ 1.1
SRRM4-204ENST00000641899 OVOS2Q6IE36 1432 aa21.89■■□□□ 1.1
SRRM4-204ENST00000641899 PLSCR1O15162 318 aa21.89■■□□□ 1.09
SRRM4-204ENST00000641899 SRPK2P78362 688 aaKnown RBP21.88■■□□□ 1.09
SRRM4-204ENST00000641899 CAMTA1Q9Y6Y1 1673 aa21.88■■□□□ 1.09
SRRM4-204ENST00000641899 DDB1Q16531 1140 aa21.87■■□□□ 1.09
SRRM4-204ENST00000641899 CRB1P82279 1406 aa21.87■■□□□ 1.09
SRRM4-204ENST00000641899 RREB1Q92766 1687 aa21.86■■□□□ 1.09
SRRM4-204ENST00000641899 CDCA7Q9BWT1 371 aaPredicted RBP21.86■■□□□ 1.09
SRRM4-204ENST00000641899 ZBTB7CA1YPR0 619 aa21.85■■□□□ 1.09
SRRM4-204ENST00000641899 NRKQ7Z2Y5 1582 aa21.85■■□□□ 1.09
SRRM4-204ENST00000641899 COL5A2P05997 1499 aaPredicted RBP21.84■■□□□ 1.09
SRRM4-204ENST00000641899 TOM1L2Q6ZVM7 507 aa21.84■■□□□ 1.09
SRRM4-204ENST00000641899 BCL11BQ9C0K0 894 aaPredicted RBP21.84■■□□□ 1.09
SRRM4-204ENST00000641899 NUP188Q5SRE5 1749 aa21.83■■□□□ 1.08
SRRM4-204ENST00000641899 ARHGEF28Q8N1W1 1705 aaKnown RBP21.83■■□□□ 1.08
SRRM4-204ENST00000641899 PPIP5K1Q6PFW1 1433 aa21.82■■□□□ 1.08
SRRM4-204ENST00000641899 NLRP6P59044 892 aa21.82■■□□□ 1.08
SRRM4-204ENST00000641899 AATKQ6ZMQ8 1374 aa21.82■■□□□ 1.08
SRRM4-204ENST00000641899 LMO7Q8WWI1 1683 aa21.8■■□□□ 1.08
SRRM4-204ENST00000641899 CENPJQ9HC77 1338 aaPredicted RBP21.79■■□□□ 1.08
SRRM4-204ENST00000641899 STK32BQ9NY57 414 aa21.78■■□□□ 1.08
SRRM4-204ENST00000641899 TOPAZ1Q8N9V7 1692 aa21.78■■□□□ 1.08
SRRM4-204ENST00000641899 PARP4Q9UKK3 1724 aaKnown RBP21.77■■□□□ 1.08
SRRM4-204ENST00000641899 KCNH5Q8NCM2 988 aa21.76■■□□□ 1.07
SRRM4-204ENST00000641899 CABP2Q9NPB3 220 aa21.76■■□□□ 1.07
SRRM4-204ENST00000641899 WDR17Q8IZU2 1322 aa21.76■■□□□ 1.07
SRRM4-204ENST00000641899 CSB-PGBD3P0DP91 1061 aa21.75■■□□□ 1.07
SRRM4-204ENST00000641899 BCL9O00512 1426 aa21.74■■□□□ 1.07
SRRM4-204ENST00000641899 CABP1Q9NZU7 370 aa21.74■■□□□ 1.07
SRRM4-204ENST00000641899 ZBTB7AO95365 584 aa21.73■■□□□ 1.07
SRRM4-204ENST00000641899 ANO8Q9HCE9 1232 aaPredicted RBP21.73■■□□□ 1.07
SRRM4-204ENST00000641899 RGPD3A6NKT7 1758 aaPredicted RBP21.73■■□□□ 1.07
SRRM4-204ENST00000641899 RGPD4Q7Z3J3 1758 aa21.73■■□□□ 1.07
SRRM4-204ENST00000641899 USP6P35125 1406 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms