RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 KIF1AQ12756 1690 aa13.35□□□□□ -0.27
PHGDH-228ENST00000641847 TRIM37O94972 964 aa13.35□□□□□ -0.27
PHGDH-228ENST00000641847 CAMKK2Q96RR4 588 aa13.35□□□□□ -0.27
PHGDH-228ENST00000641847 RGPD1P0DJD0 1748 aa13.35□□□□□ -0.27
PHGDH-228ENST00000641847 ADGRB2O60241 1585 aa13.34□□□□□ -0.27
PHGDH-228ENST00000641847 SPATA31A5Q5VU36 1347 aa13.34□□□□□ -0.27
PHGDH-228ENST00000641847 SPATA31A7Q8IWB4 1347 aa13.34□□□□□ -0.27
PHGDH-228ENST00000641847 ABCC11Q96J66 1382 aa13.33□□□□□ -0.27
PHGDH-228ENST00000641847 NINLQ9Y2I6 1382 aa13.33□□□□□ -0.27
PHGDH-228ENST00000641847 TECPR2O15040 1411 aa13.33□□□□□ -0.28
PHGDH-228ENST00000641847 PLCH1Q4KWH8 1693 aa13.32□□□□□ -0.28
PHGDH-228ENST00000641847 KCNQ2O43526 872 aa13.31□□□□□ -0.28
PHGDH-228ENST00000641847 ROCK2O75116 1388 aaKnown RBP13.31□□□□□ -0.28
PHGDH-228ENST00000641847 SENP3-EIF4A1A0A087X0R7 540 aa13.3□□□□□ -0.28
PHGDH-228ENST00000641847 PDE3BQ13370 1112 aa13.3□□□□□ -0.28
PHGDH-228ENST00000641847 IFFO2Q5TF58 517 aa13.3□□□□□ -0.28
PHGDH-228ENST00000641847 TMEM132EQ6IEE7 984 aa13.3□□□□□ -0.28
PHGDH-228ENST00000641847 SIRT1Q96EB6 747 aa13.3□□□□□ -0.28
PHGDH-228ENST00000641847 PRDM11Q9NQV5 511 aa13.3□□□□□ -0.28
PHGDH-228ENST00000641847 GPRASP1Q5JY77 1395 aa13.29□□□□□ -0.28
PHGDH-228ENST00000641847 PLEKHH1Q9ULM0 1364 aa13.29□□□□□ -0.28
PHGDH-228ENST00000641847 ADGRB1O14514 1584 aa13.28□□□□□ -0.28
PHGDH-228ENST00000641847 CEP350Q5VT06 3117 aa13.28□□□□□ -0.28
PHGDH-228ENST00000641847 CFAP70Q5T0N1 1121 aa13.28□□□□□ -0.28
PHGDH-228ENST00000641847 FMN2Q9NZ56 1722 aa13.27□□□□□ -0.28
PHGDH-228ENST00000641847 PMFBP1Q8TBY8 1022 aa13.27□□□□□ -0.29
PHGDH-228ENST00000641847 C11orf95C9JLR9 678 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-228ENST00000641847 NBPF1Q3BBV0 1214 aa13.26□□□□□ -0.29
PHGDH-228ENST00000641847 SPATA31A1Q5TZJ5 1347 aa13.26□□□□□ -0.29
PHGDH-228ENST00000641847 ZNF784Q8NCA9 323 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-228ENST00000641847 CARD11Q9BXL7 1154 aa13.26□□□□□ -0.29
PHGDH-228ENST00000641847 YTHDC2Q9H6S0 1430 aaKnown RBP13.26□□□□□ -0.29
PHGDH-228ENST00000641847 C14orf93Q9H972 538 aaKnown RBP13.26□□□□□ -0.29
PHGDH-228ENST00000641847 COL14A1Q05707 1796 aaKnown RBP13.25□□□□□ -0.29
PHGDH-228ENST00000641847 EVA1CP58658 441 aa13.25□□□□□ -0.29
PHGDH-228ENST00000641847 STRN4Q9NRL3 753 aa13.25□□□□□ -0.29
PHGDH-228ENST00000641847 POGKQ9P215 609 aa13.25□□□□□ -0.29
PHGDH-228ENST00000641847 PAK3O75914 559 aaPredicted RBP13.24□□□□□ -0.29
PHGDH-228ENST00000641847 USP47Q96K76 1375 aa13.23□□□□□ -0.29
PHGDH-228ENST00000641847 TNS1Q9HBL0 1735 aaKnown RBP13.23□□□□□ -0.29
PHGDH-228ENST00000641847 C1QTNF8P60827 252 aa13.23□□□□□ -0.29
PHGDH-228ENST00000641847 SAFB2Q14151 953 aaKnown RBP eCLIP13.23□□□□□ -0.29
PHGDH-228ENST00000641847 USP35Q9P2H5 1018 aa13.23□□□□□ -0.29
PHGDH-228ENST00000641847 ANKARQ7Z5J8 1434 aa13.22□□□□□ -0.29
PHGDH-228ENST00000641847 KNDC1Q76NI1 1749 aa13.22□□□□□ -0.29
PHGDH-228ENST00000641847 NRAPQ86VF7 1730 aa13.22□□□□□ -0.29
PHGDH-228ENST00000641847 ARHGEF28Q8N1W1 1705 aaKnown RBP13.22□□□□□ -0.29
PHGDH-228ENST00000641847 EIF3AQ14152 1382 aaKnown RBP13.22□□□□□ -0.29
PHGDH-228ENST00000641847 NGDNQ8NEJ9 315 aaKnown RBP13.22□□□□□ -0.29
PHGDH-228ENST00000641847 PRAM1Q96QH2 718 aa13.22□□□□□ -0.29
PHGDH-228ENST00000641847 THSD7AQ9UPZ6 1657 aa13.21□□□□□ -0.29
PHGDH-228ENST00000641847 BARGINQ6ZT62 677 aa13.21□□□□□ -0.29
PHGDH-228ENST00000641847 ABCA3Q99758 1704 aa13.21□□□□□ -0.3
PHGDH-228ENST00000641847 EIF4G2P78344 907 aaKnown RBP eCLIP13.19□□□□□ -0.3
PHGDH-228ENST00000641847 KIAA0232Q92628 1395 aa13.19□□□□□ -0.3
PHGDH-228ENST00000641847 DLC1Q96QB1 1528 aa13.18□□□□□ -0.3
PHGDH-228ENST00000641847 HSPA5P11021 654 aaKnown RBP13.18□□□□□ -0.3
PHGDH-228ENST00000641847 CHRNA2Q15822 529 aa13.18□□□□□ -0.3
PHGDH-228ENST00000641847 TCP11L2Q8N4U5 519 aa13.18□□□□□ -0.3
PHGDH-228ENST00000641847 QRICH2Q9H0J4 1663 aa13.18□□□□□ -0.3
PHGDH-228ENST00000641847 TRAK1Q9UPV9 953 aa13.17□□□□□ -0.3
PHGDH-228ENST00000641847 THRAP3Q9Y2W1 955 aaKnown RBP13.17□□□□□ -0.3
PHGDH-228ENST00000641847 BCL11BQ9C0K0 894 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-228ENST00000641847 GOLGB1Q14789 3259 aaKnown RBP13.16□□□□□ -0.3
PHGDH-228ENST00000641847 RGPD8O14715 1765 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-228ENST00000641847 PLSCR1O15162 318 aa13.15□□□□□ -0.3
PHGDH-228ENST00000641847 ZC3H6P61129 1189 aaKnown RBP13.15□□□□□ -0.3
PHGDH-228ENST00000641847 HIRIP3Q9BW71 556 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-228ENST00000641847 RREB1Q92766 1687 aa13.15□□□□□ -0.31
PHGDH-228ENST00000641847 NUP188Q5SRE5 1749 aa13.14□□□□□ -0.31
PHGDH-228ENST00000641847 GIGYF1O75420 1035 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-228ENST00000641847 ZBTB7AO95365 584 aa13.14□□□□□ -0.31
PHGDH-228ENST00000641847 ST20-MTHFSA0A0A6YYL1 179 aa13.13□□□□□ -0.31
PHGDH-228ENST00000641847 FHDC1Q9C0D6 1143 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-228ENST00000641847 SSH2Q76I76 1423 aa13.13□□□□□ -0.31
PHGDH-228ENST00000641847 CENPJQ9HC77 1338 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-228ENST00000641847 WASLO00401 505 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-228ENST00000641847 LARP1Q6PKG0 1096 aaKnown RBP13.12□□□□□ -0.31
PHGDH-228ENST00000641847 SYT17Q9BSW7 474 aa13.12□□□□□ -0.31
PHGDH-228ENST00000641847 STK32BQ9NY57 414 aa13.12□□□□□ -0.31
PHGDH-228ENST00000641847 ATF5Q9Y2D1 282 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-228ENST00000641847 ALS2Q96Q42 1657 aa13.12□□□□□ -0.31
PHGDH-228ENST00000641847 TRPM3Q9HCF6 1732 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-228ENST00000641847 OVOS2A0A0G2JMS6 1433 aa13.11□□□□□ -0.31
PHGDH-228ENST00000641847 OVOS2A0A0J9YW53 1432 aa13.11□□□□□ -0.31
PHGDH-228ENST00000641847 OVOS2Q6IE36 1432 aa13.11□□□□□ -0.31
PHGDH-228ENST00000641847 MINK1Q8N4C8 1332 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-228ENST00000641847 CAMTA1Q9Y6Y1 1673 aa13.1□□□□□ -0.31
PHGDH-228ENST00000641847 ZNF316A6NFI3 1004 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-228ENST00000641847 PTGER2P43116 358 aa13.1□□□□□ -0.31
PHGDH-228ENST00000641847 SBNO2Q9Y2G9 1366 aa13.09□□□□□ -0.31
PHGDH-228ENST00000641847 DDB1Q16531 1140 aa13.09□□□□□ -0.31
PHGDH-228ENST00000641847 GPR162Q16538 588 aa13.09□□□□□ -0.31
PHGDH-228ENST00000641847 NUTM2GQ5VZR2 741 aa13.09□□□□□ -0.31
PHGDH-228ENST00000641847 NRKQ7Z2Y5 1582 aa13.09□□□□□ -0.31
PHGDH-228ENST00000641847 TESK2Q96S53 571 aa13.09□□□□□ -0.31
PHGDH-228ENST00000641847 MTFR1LQ9H019 292 aa13.09□□□□□ -0.31
PHGDH-228ENST00000641847 ANO8Q9HCE9 1232 aaPredicted RBP13.09□□□□□ -0.31
PHGDH-228ENST00000641847 PRR36Q9H6K5 1346 aa13.09□□□□□ -0.31
PHGDH-228ENST00000641847 TULP4Q9NRJ4 1543 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms