RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 PRR36Q9H6K5 1346 aa11.09□□□□□ -0.63
PHGDH-225ENST00000641720 MYOM1P52179 1685 aa11.08□□□□□ -0.64
PHGDH-225ENST00000641720 R3HDM1Q15032 1099 aaKnown RBP11.08□□□□□ -0.64
PHGDH-225ENST00000641720 FAM98CQ17RN3 349 aaKnown RBP11.08□□□□□ -0.64
PHGDH-225ENST00000641720 FAM182BQ5T319 152 aa11.08□□□□□ -0.64
PHGDH-225ENST00000641720 CAMKK2Q96RR4 588 aa11.08□□□□□ -0.64
PHGDH-225ENST00000641720 STK26Q9P289 416 aa11.08□□□□□ -0.64
PHGDH-225ENST00000641720 GOLGB1Q14789 3259 aaKnown RBP11.08□□□□□ -0.64
PHGDH-225ENST00000641720 LRRC37A3O60309 1634 aa11.08□□□□□ -0.64
PHGDH-225ENST00000641720 COL18A1P39060 1754 aa11.07□□□□□ -0.64
PHGDH-225ENST00000641720 ATP7BP35670 1465 aa11.06□□□□□ -0.64
PHGDH-225ENST00000641720 AKAP12Q02952 1782 aa11.06□□□□□ -0.64
PHGDH-225ENST00000641720 RGPD5Q99666 1765 aa11.06□□□□□ -0.64
PHGDH-225ENST00000641720 SF3B2Q13435 895 aaKnown RBP11.06□□□□□ -0.64
PHGDH-225ENST00000641720 EZH2Q15910 746 aaKnown RBP11.06□□□□□ -0.64
PHGDH-225ENST00000641720 C14orf93Q9H972 538 aaKnown RBP11.06□□□□□ -0.64
PHGDH-225ENST00000641720 COL24A1Q17RW2 1714 aa11.06□□□□□ -0.64
PHGDH-225ENST00000641720 CEP350Q5VT06 3117 aa11.06□□□□□ -0.64
PHGDH-225ENST00000641720 BTG4Q9NY30 223 aa11.05□□□□□ -0.64
PHGDH-225ENST00000641720 PARD3Q8TEW0 1356 aa11.04□□□□□ -0.64
PHGDH-225ENST00000641720 SLC4A1APQ9BWU0 796 aaKnown RBP11.04□□□□□ -0.64
PHGDH-225ENST00000641720 SPATA31A1Q5TZJ5 1347 aa11.04□□□□□ -0.64
PHGDH-225ENST00000641720 ACIN1Q9UKV3 1341 aaKnown RBP11.03□□□□□ -0.64
PHGDH-225ENST00000641720 PSME1Q06323 249 aa11.02□□□□□ -0.65
PHGDH-225ENST00000641720 TRIM26Q12899 539 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-225ENST00000641720 PMFBP1Q8TBY8 1022 aa11.01□□□□□ -0.65
PHGDH-225ENST00000641720 CCDC9Q9Y3X0 531 aaKnown RBP11.01□□□□□ -0.65
PHGDH-225ENST00000641720 PAPPAQ13219 1627 aa11.01□□□□□ -0.65
PHGDH-225ENST00000641720 RAB3GAP2Q9H2M9 1393 aa11.01□□□□□ -0.65
PHGDH-225ENST00000641720 RGL3Q3MIN7 710 aa11□□□□□ -0.65
PHGDH-225ENST00000641720 CFAP70Q5T0N1 1121 aa11□□□□□ -0.65
PHGDH-225ENST00000641720 PRAM1Q96QH2 718 aa11□□□□□ -0.65
PHGDH-225ENST00000641720 KIAA0232Q92628 1395 aa11□□□□□ -0.65
PHGDH-225ENST00000641720 TUBGCP6Q96RT7 1819 aa11□□□□□ -0.65
PHGDH-225ENST00000641720 SSH2Q76I76 1423 aa11□□□□□ -0.65
PHGDH-225ENST00000641720 QSER1Q2KHR3 1735 aa10.99□□□□□ -0.65
PHGDH-225ENST00000641720 KIAA1210Q9ULL0 1709 aa10.99□□□□□ -0.65
PHGDH-225ENST00000641720 TRIM37O94972 964 aa10.99□□□□□ -0.65
PHGDH-225ENST00000641720 DHX57Q6P158 1386 aaKnown RBP10.99□□□□□ -0.65
PHGDH-225ENST00000641720 NINLQ9Y2I6 1382 aa10.99□□□□□ -0.65
PHGDH-225ENST00000641720 PLEKHG5O94827 1062 aa10.97□□□□□ -0.65
PHGDH-225ENST00000641720 YY1P25490 414 aa10.97□□□□□ -0.65
PHGDH-225ENST00000641720 PIK3C2AO00443 1686 aa10.97□□□□□ -0.65
PHGDH-225ENST00000641720 SLIT3O75094 1523 aa10.96□□□□□ -0.65
PHGDH-225ENST00000641720 COL5A2P05997 1499 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-225ENST00000641720 POLR3AO14802 1390 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-225ENST00000641720 HAP1P54257 671 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-225ENST00000641720 SAFB2Q14151 953 aaKnown RBP eCLIP10.96□□□□□ -0.65
PHGDH-225ENST00000641720 FAM196AQ6ZSG2 479 aa10.96□□□□□ -0.65
PHGDH-225ENST00000641720 BARGINQ6ZT62 677 aa10.96□□□□□ -0.65
PHGDH-225ENST00000641720 NHSQ6T4R5 1651 aa10.95□□□□□ -0.66
PHGDH-225ENST00000641720 CPDO75976 1380 aa10.95□□□□□ -0.66
PHGDH-225ENST00000641720 LMOD2Q6P5Q4 547 aa10.95□□□□□ -0.66
PHGDH-225ENST00000641720 MPHOSPH9Q99550 1183 aa10.95□□□□□ -0.66
PHGDH-225ENST00000641720 GPRASP1Q5JY77 1395 aa10.94□□□□□ -0.66
PHGDH-225ENST00000641720 USP19O94966 1318 aa10.94□□□□□ -0.66
PHGDH-225ENST00000641720 A0A0G2JS52 829 aa10.94□□□□□ -0.66
PHGDH-225ENST00000641720 MYT1Q01538 1121 aa10.94□□□□□ -0.66
PHGDH-225ENST00000641720 ANO8Q9HCE9 1232 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-225ENST00000641720 EIF3AQ14152 1382 aaKnown RBP10.93□□□□□ -0.66
PHGDH-225ENST00000641720 USP54Q70EL1 1684 aa10.93□□□□□ -0.66
PHGDH-225ENST00000641720 WASLO00401 505 aaPredicted RBP10.93□□□□□ -0.66
PHGDH-225ENST00000641720 APBA3O96018 575 aa10.93□□□□□ -0.66
PHGDH-225ENST00000641720 CHRNA2Q15822 529 aa10.93□□□□□ -0.66
PHGDH-225ENST00000641720 HIRIP3Q9BW71 556 aaPredicted RBP10.93□□□□□ -0.66
PHGDH-225ENST00000641720 PRDM11Q9NQV5 511 aa10.93□□□□□ -0.66
PHGDH-225ENST00000641720 BTAF1O14981 1849 aa10.93□□□□□ -0.66
PHGDH-225ENST00000641720 BCL9O00512 1426 aa10.92□□□□□ -0.66
PHGDH-225ENST00000641720 SHANK3Q9BYB0 1731 aa10.92□□□□□ -0.66
PHGDH-225ENST00000641720 PDGFDQ9GZP0 370 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-225ENST00000641720 QRICH2Q9H0J4 1663 aa10.92□□□□□ -0.66
PHGDH-225ENST00000641720 TRPM1Q7Z4N2 1603 aa10.91□□□□□ -0.66
PHGDH-225ENST00000641720 MINK1Q8N4C8 1332 aaPredicted RBP10.91□□□□□ -0.66
PHGDH-225ENST00000641720 KCNQ2O43526 872 aa10.91□□□□□ -0.66
PHGDH-225ENST00000641720 PTF1AQ7RTS3 328 aa10.91□□□□□ -0.66
PHGDH-225ENST00000641720 PTGER2P43116 358 aa10.9□□□□□ -0.66
PHGDH-225ENST00000641720 LARP1Q6PKG0 1096 aaKnown RBP10.9□□□□□ -0.66
PHGDH-225ENST00000641720 PROM2Q8N271 834 aa10.9□□□□□ -0.66
PHGDH-225ENST00000641720 PCGF6Q9BYE7 350 aa10.9□□□□□ -0.66
PHGDH-225ENST00000641720 OVOS2A0A0G2JMS6 1433 aa10.9□□□□□ -0.66
PHGDH-225ENST00000641720 OVOS2A0A0J9YW53 1432 aa10.9□□□□□ -0.66
PHGDH-225ENST00000641720 OVOS2Q6IE36 1432 aa10.9□□□□□ -0.66
PHGDH-225ENST00000641720 SLC24A1O60721 1099 aa10.89□□□□□ -0.67
PHGDH-225ENST00000641720 SGIP1Q9BQI5 828 aa10.89□□□□□ -0.67
PHGDH-225ENST00000641720 SPON1Q9HCB6 807 aa10.89□□□□□ -0.67
PHGDH-225ENST00000641720 CRB1P82279 1406 aa10.88□□□□□ -0.67
PHGDH-225ENST00000641720 ZNF784Q8NCA9 323 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-225ENST00000641720 TRAK1Q9UPV9 953 aa10.88□□□□□ -0.67
PHGDH-225ENST00000641720 AATKQ6ZMQ8 1374 aa10.88□□□□□ -0.67
PHGDH-225ENST00000641720 KAT6BQ8WYB5 2073 aa10.88□□□□□ -0.67
PHGDH-225ENST00000641720 LTN1O94822 1766 aa10.88□□□□□ -0.67
PHGDH-225ENST00000641720 LY75O60449 1722 aa10.87□□□□□ -0.67
PHGDH-225ENST00000641720 MON2Q7Z3U7 1717 aa10.87□□□□□ -0.67
PHGDH-225ENST00000641720 PLSCR1O15162 318 aa10.87□□□□□ -0.67
PHGDH-225ENST00000641720 ZC3H6P61129 1189 aaKnown RBP10.87□□□□□ -0.67
PHGDH-225ENST00000641720 TCP11L2Q8N4U5 519 aa10.87□□□□□ -0.67
PHGDH-225ENST00000641720 NUDT16Q96DE0 195 aaKnown RBP10.87□□□□□ -0.67
PHGDH-225ENST00000641720 STRN4Q9NRL3 753 aa10.87□□□□□ -0.67
PHGDH-225ENST00000641720 POGKQ9P215 609 aa10.87□□□□□ -0.67
PHGDH-225ENST00000641720 NFAT5O94916 1531 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms