RNA–Protein interactions for RNA: ENST00000641674.1

CASC19-248, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,356 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-248ENST00000641674 RETREG3Q86VR2 466 aa10.13□□□□□ -0.79
CASC19-248ENST00000641674 CCDC102AQ96A19 550 aa10.13□□□□□ -0.79
CASC19-248ENST00000641674 PCDHGC3Q9UN70 934 aa10.13□□□□□ -0.79
CASC19-248ENST00000641674 ABCC8Q09428 1581 aa10.12□□□□□ -0.79
CASC19-248ENST00000641674 ERBB4Q15303 1308 aa10.12□□□□□ -0.79
CASC19-248ENST00000641674 PLCB2Q00722 1185 aa10.12□□□□□ -0.79
CASC19-248ENST00000641674 ZSCAN1Q8NBB4 408 aa10.12□□□□□ -0.79
CASC19-248ENST00000641674 FAM217BQ9NTX9 383 aaPredicted RBP10.12□□□□□ -0.79
CASC19-248ENST00000641674 IRF7Q92985 503 aa10.11□□□□□ -0.79
CASC19-248ENST00000641674 TLL2Q9Y6L7 1015 aa10.11□□□□□ -0.79
CASC19-248ENST00000641674 MINK1Q8N4C8 1332 aaPredicted RBP10.1□□□□□ -0.79
CASC19-248ENST00000641674 LINC01559Q495D7 138 aa10.1□□□□□ -0.79
CASC19-248ENST00000641674 NUTM1Q86Y26 1132 aa10.1□□□□□ -0.79
CASC19-248ENST00000641674 ZFP42Q96MM3 310 aa10.1□□□□□ -0.79
CASC19-248ENST00000641674 GPCPD1Q9NPB8 672 aa10.1□□□□□ -0.79
CASC19-248ENST00000641674 H3BM21 787 aa10.09□□□□□ -0.79
CASC19-248ENST00000641674 C6orf229H3BNL8 230 aa10.09□□□□□ -0.79
CASC19-248ENST00000641674 IFT140Q96RY7 1462 aa10.08□□□□□ -0.8
CASC19-248ENST00000641674 FAM181BA6NEQ2 426 aa10.08□□□□□ -0.8
CASC19-248ENST00000641674 CCNYL3P0C7X3 344 aa10.08□□□□□ -0.8
CASC19-248ENST00000641674 FDX1P10109 184 aa10.08□□□□□ -0.8
CASC19-248ENST00000641674 MS4A1P11836 297 aa10.08□□□□□ -0.8
CASC19-248ENST00000641674 BAP1Q92560 729 aa10.07□□□□□ -0.8
CASC19-248ENST00000641674 UNC93B1Q9H1C4 597 aa10.07□□□□□ -0.8
CASC19-248ENST00000641674 TOPBP1Q92547 1522 aa10.06□□□□□ -0.8
CASC19-248ENST00000641674 CLCN1P35523 988 aa10.06□□□□□ -0.8
CASC19-248ENST00000641674 NPAS3Q8IXF0 933 aa10.06□□□□□ -0.8
CASC19-248ENST00000641674 SOBPA7XYQ1 873 aa10.05□□□□□ -0.8
CASC19-248ENST00000641674 KDM2AQ9Y2K7 1162 aa10.05□□□□□ -0.8
CASC19-248ENST00000641674 DNMBPQ6XZF7 1577 aa10.04□□□□□ -0.8
CASC19-248ENST00000641674 NDUFV2P19404 249 aa10.03□□□□□ -0.8
CASC19-248ENST00000641674 NNTQ13423 1086 aa10.03□□□□□ -0.8
CASC19-248ENST00000641674 EVA1BQ9NVM1 165 aa10.03□□□□□ -0.8
CASC19-248ENST00000641674 PTPRNQ16849 979 aa10.02□□□□□ -0.8
CASC19-248ENST00000641674 PURBQ96QR8 312 aaKnown RBP10.02□□□□□ -0.8
CASC19-248ENST00000641674 ZNF608Q9ULD9 1512 aaPredicted RBP10.02□□□□□ -0.81
CASC19-248ENST00000641674 SPIRE2Q8WWL2 714 aa10.01□□□□□ -0.81
CASC19-248ENST00000641674 KCNH2Q12809 1159 aa10.01□□□□□ -0.81
CASC19-248ENST00000641674 MRPL14Q6P1L8 145 aaKnown RBP10.01□□□□□ -0.81
CASC19-248ENST00000641674 KRI1Q8N9T8 703 aaKnown RBP10.01□□□□□ -0.81
CASC19-248ENST00000641674 ZNF511Q8NB15 262 aa10.01□□□□□ -0.81
CASC19-248ENST00000641674 MOXD2PA6NHM9 499 aa10□□□□□ -0.81
CASC19-248ENST00000641674 TIMP2P16035 220 aa10□□□□□ -0.81
CASC19-248ENST00000641674 HAP1P54257 671 aaPredicted RBP10□□□□□ -0.81
CASC19-248ENST00000641674 PRR7Q8TB68 274 aa10□□□□□ -0.81
CASC19-248ENST00000641674 WDR4P57081 412 aaKnown RBP9.99□□□□□ -0.81
CASC19-248ENST00000641674 VARSP26640 1264 aaKnown RBP9.98□□□□□ -0.81
CASC19-248ENST00000641674 SSTR3P32745 418 aaPredicted RBP9.98□□□□□ -0.81
CASC19-248ENST00000641674 EIF4G3O43432 1585 aaKnown RBP9.98□□□□□ -0.81
CASC19-248ENST00000641674 PLEKHG3A1L390 1219 aa9.97□□□□□ -0.81
CASC19-248ENST00000641674 SUPT5HO00267 1087 aaKnown RBP9.97□□□□□ -0.81
CASC19-248ENST00000641674 SCARF1Q14162 830 aa9.97□□□□□ -0.81
CASC19-248ENST00000641674 SOGA1O94964 1423 aa9.96□□□□□ -0.81
CASC19-248ENST00000641674 AQRO60306 1485 aaKnown RBP eCLIP9.96□□□□□ -0.813e-6■■■■□ 24.7
CASC19-248ENST00000641674 TARBP1Q13395 1621 aaKnown RBP9.96□□□□□ -0.81
CASC19-248ENST00000641674 LOC100996750A0A140TA64 210 aa9.96□□□□□ -0.82
CASC19-248ENST00000641674 KLF16Q9BXK1 252 aaPredicted RBP9.96□□□□□ -0.82
CASC19-248ENST00000641674 KRTAP4-6Q9BYQ5 205 aa9.96□□□□□ -0.82
CASC19-248ENST00000641674 POLA1P09884 1462 aaPredicted RBP9.96□□□□□ -0.82
CASC19-248ENST00000641674 TULP1O00294 542 aaPredicted RBP9.95□□□□□ -0.82
CASC19-248ENST00000641674 ADH1CP00326 375 aa9.95□□□□□ -0.82
CASC19-248ENST00000641674 MPNDQ8N594 471 aa9.94□□□□□ -0.82
CASC19-248ENST00000641674 ZFAND3Q9H8U3 227 aa9.94□□□□□ -0.82
CASC19-248ENST00000641674 RIMBP3CA6NJZ7 1639 aa9.94□□□□□ -0.82
CASC19-248ENST00000641674 RIMBP3BA6NNM3 1639 aa9.94□□□□□ -0.82
CASC19-248ENST00000641674 RIMBP3Q9UFD9 1639 aa9.94□□□□□ -0.82
CASC19-248ENST00000641674 CHD1O14646 1710 aa9.93□□□□□ -0.82
CASC19-248ENST00000641674 CTHP32929 405 aa9.93□□□□□ -0.82
CASC19-248ENST00000641674 MTMR2Q13614 643 aa9.93□□□□□ -0.82
CASC19-248ENST00000641674 FOXJ1Q92949 421 aa9.93□□□□□ -0.82
CASC19-248ENST00000641674 TDRD9Q8NDG6 1382 aaKnown RBP9.92□□□□□ -0.82
CASC19-248ENST00000641674 ARID5BQ14865 1188 aa9.92□□□□□ -0.82
CASC19-248ENST00000641674 C6orf118Q5T5N4 469 aa9.92□□□□□ -0.82
CASC19-248ENST00000641674 RAD54L2Q9Y4B4 1467 aa9.92□□□□□ -0.82
CASC19-248ENST00000641674 VSIG8P0DPA2 414 aa9.91□□□□□ -0.82
CASC19-248ENST00000641674 CHMP7Q8WUX9 453 aaPredicted RBP9.91□□□□□ -0.82
CASC19-248ENST00000641674 ZIC2O95409 532 aaPredicted RBP9.9□□□□□ -0.82
CASC19-248ENST00000641674 DESI1Q6ICB0 168 aa9.9□□□□□ -0.82
CASC19-248ENST00000641674 CYB5RLQ6IPT4 315 aa9.9□□□□□ -0.82
CASC19-248ENST00000641674 ITPKCQ96DU7 683 aa9.9□□□□□ -0.82
CASC19-248ENST00000641674 WDR97A6NE52 1622 aa9.9□□□□□ -0.82
CASC19-248ENST00000641674 ARHGEF11O15085 1522 aa9.9□□□□□ -0.82
CASC19-248ENST00000641674 FGD5Q6ZNL6 1462 aa9.9□□□□□ -0.82
CASC19-248ENST00000641674 NR3C2P08235 984 aa9.89□□□□□ -0.83
CASC19-248ENST00000641674 FAM174AQ8TBP5 190 aa9.89□□□□□ -0.83
CASC19-248ENST00000641674 MAP10Q9P2G4 905 aa9.89□□□□□ -0.83
CASC19-248ENST00000641674 MAN1A2O60476 641 aa9.88□□□□□ -0.83
CASC19-248ENST00000641674 TTLL12Q14166 644 aaPredicted RBP9.88□□□□□ -0.83
CASC19-248ENST00000641674 PCDHB15Q9Y5E8 787 aa9.88□□□□□ -0.83
CASC19-248ENST00000641674 CUX1P39880 1505 aa9.88□□□□□ -0.83
CASC19-248ENST00000641674 SPDYE5A6NIY4 337 aa9.88□□□□□ -0.83
CASC19-248ENST00000641674 CFAP99D6REC4 459 aa9.88□□□□□ -0.83
CASC19-248ENST00000641674 C4orf48Q5BLP8 95 aa9.88□□□□□ -0.83
CASC19-248ENST00000641674 LYPD8Q6UX82 237 aa9.88□□□□□ -0.83
CASC19-248ENST00000641674 CDK15Q96Q40 435 aa9.88□□□□□ -0.83
CASC19-248ENST00000641674 GRIN2BQ13224 1484 aa9.86□□□□□ -0.83
CASC19-248ENST00000641674 PPFIA3O75145 1194 aa9.86□□□□□ -0.83
CASC19-248ENST00000641674 GIGYF2Q6Y7W6 1299 aaKnown RBP9.86□□□□□ -0.83
CASC19-248ENST00000641674 BEGAINQ9BUH8 593 aa9.86□□□□□ -0.83
CASC19-248ENST00000641674 MAGI1Q96QZ7 1491 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms