RNA–Protein interactions for RNA: ENST00000641674.1

CASC19-248, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,356 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-248ENST00000641674 RETREG3Q86VR2 466 aa10.13□□□□□ -0.79
CASC19-248ENST00000641674 CCDC102AQ96A19 550 aa10.13□□□□□ -0.79
CASC19-248ENST00000641674 PCDHGC3Q9UN70 934 aa10.13□□□□□ -0.79
CASC19-248ENST00000641674 ABCC8Q09428 1581 aa10.12□□□□□ -0.79
CASC19-248ENST00000641674 ERBB4Q15303 1308 aa10.12□□□□□ -0.79
CASC19-248ENST00000641674 PLCB2Q00722 1185 aa10.12□□□□□ -0.79
CASC19-248ENST00000641674 ZSCAN1Q8NBB4 408 aa10.12□□□□□ -0.79
CASC19-248ENST00000641674 FAM217BQ9NTX9 383 aaPredicted RBP10.12□□□□□ -0.79
CASC19-248ENST00000641674 IRF7Q92985 503 aa10.11□□□□□ -0.79
CASC19-248ENST00000641674 TLL2Q9Y6L7 1015 aa10.11□□□□□ -0.79
CASC19-248ENST00000641674 MINK1Q8N4C8 1332 aaPredicted RBP10.1□□□□□ -0.79
CASC19-248ENST00000641674 LINC01559Q495D7 138 aa10.1□□□□□ -0.79
CASC19-248ENST00000641674 NUTM1Q86Y26 1132 aa10.1□□□□□ -0.79
CASC19-248ENST00000641674 ZFP42Q96MM3 310 aa10.1□□□□□ -0.79
CASC19-248ENST00000641674 GPCPD1Q9NPB8 672 aa10.1□□□□□ -0.79
CASC19-248ENST00000641674 H3BM21 787 aa10.09□□□□□ -0.79
CASC19-248ENST00000641674 C6orf229H3BNL8 230 aa10.09□□□□□ -0.79
CASC19-248ENST00000641674 IFT140Q96RY7 1462 aa10.08□□□□□ -0.8
CASC19-248ENST00000641674 FAM181BA6NEQ2 426 aa10.08□□□□□ -0.8
CASC19-248ENST00000641674 CCNYL3P0C7X3 344 aa10.08□□□□□ -0.8
CASC19-248ENST00000641674 FDX1P10109 184 aa10.08□□□□□ -0.8
CASC19-248ENST00000641674 MS4A1P11836 297 aa10.08□□□□□ -0.8
CASC19-248ENST00000641674 BAP1Q92560 729 aa10.07□□□□□ -0.8
CASC19-248ENST00000641674 UNC93B1Q9H1C4 597 aa10.07□□□□□ -0.8
CASC19-248ENST00000641674 TOPBP1Q92547 1522 aa10.06□□□□□ -0.8
CASC19-248ENST00000641674 CLCN1P35523 988 aa10.06□□□□□ -0.8
CASC19-248ENST00000641674 NPAS3Q8IXF0 933 aa10.06□□□□□ -0.8
CASC19-248ENST00000641674 SOBPA7XYQ1 873 aa10.05□□□□□ -0.8
CASC19-248ENST00000641674 KDM2AQ9Y2K7 1162 aa10.05□□□□□ -0.8
CASC19-248ENST00000641674 DNMBPQ6XZF7 1577 aa10.04□□□□□ -0.8
CASC19-248ENST00000641674 NDUFV2P19404 249 aa10.03□□□□□ -0.8
CASC19-248ENST00000641674 NNTQ13423 1086 aa10.03□□□□□ -0.8
CASC19-248ENST00000641674 EVA1BQ9NVM1 165 aa10.03□□□□□ -0.8
CASC19-248ENST00000641674 PTPRNQ16849 979 aa10.02□□□□□ -0.8
CASC19-248ENST00000641674 PURBQ96QR8 312 aaKnown RBP10.02□□□□□ -0.8
CASC19-248ENST00000641674 ZNF608Q9ULD9 1512 aaPredicted RBP10.02□□□□□ -0.81
CASC19-248ENST00000641674 SPIRE2Q8WWL2 714 aa10.01□□□□□ -0.81
CASC19-248ENST00000641674 KCNH2Q12809 1159 aa10.01□□□□□ -0.81
CASC19-248ENST00000641674 MRPL14Q6P1L8 145 aaKnown RBP10.01□□□□□ -0.81
CASC19-248ENST00000641674 KRI1Q8N9T8 703 aaKnown RBP10.01□□□□□ -0.81
CASC19-248ENST00000641674 ZNF511Q8NB15 262 aa10.01□□□□□ -0.81
CASC19-248ENST00000641674 MOXD2PA6NHM9 499 aa10□□□□□ -0.81
CASC19-248ENST00000641674 TIMP2P16035 220 aa10□□□□□ -0.81
CASC19-248ENST00000641674 HAP1P54257 671 aaPredicted RBP10□□□□□ -0.81
CASC19-248ENST00000641674 PRR7Q8TB68 274 aa10□□□□□ -0.81
CASC19-248ENST00000641674 WDR4P57081 412 aaKnown RBP9.99□□□□□ -0.81
CASC19-248ENST00000641674 VARSP26640 1264 aaKnown RBP9.98□□□□□ -0.81
CASC19-248ENST00000641674 SSTR3P32745 418 aaPredicted RBP9.98□□□□□ -0.81
CASC19-248ENST00000641674 EIF4G3O43432 1585 aaKnown RBP9.98□□□□□ -0.81
CASC19-248ENST00000641674 PLEKHG3A1L390 1219 aa9.97□□□□□ -0.81
CASC19-248ENST00000641674 SUPT5HO00267 1087 aaKnown RBP9.97□□□□□ -0.81
CASC19-248ENST00000641674 SCARF1Q14162 830 aa9.97□□□□□ -0.81
CASC19-248ENST00000641674 SOGA1O94964 1423 aa9.96□□□□□ -0.81
CASC19-248ENST00000641674 AQRO60306 1485 aaKnown RBP eCLIP9.96□□□□□ -0.813e-6■■■■□ 24.7
CASC19-248ENST00000641674 TARBP1Q13395 1621 aaKnown RBP9.96□□□□□ -0.81
CASC19-248ENST00000641674 LOC100996750A0A140TA64 210 aa9.96□□□□□ -0.82
CASC19-248ENST00000641674 KLF16Q9BXK1 252 aaPredicted RBP9.96□□□□□ -0.82
CASC19-248ENST00000641674 KRTAP4-6Q9BYQ5 205 aa9.96□□□□□ -0.82
CASC19-248ENST00000641674 POLA1P09884 1462 aaPredicted RBP9.96□□□□□ -0.82
CASC19-248ENST00000641674 TULP1O00294 542 aaPredicted RBP9.95□□□□□ -0.82
CASC19-248ENST00000641674 ADH1CP00326 375 aa9.95□□□□□ -0.82
CASC19-248ENST00000641674 MPNDQ8N594 471 aa9.94□□□□□ -0.82
CASC19-248ENST00000641674 ZFAND3Q9H8U3 227 aa9.94□□□□□ -0.82
CASC19-248ENST00000641674 RIMBP3CA6NJZ7 1639 aa9.94□□□□□ -0.82
CASC19-248ENST00000641674 RIMBP3BA6NNM3 1639 aa9.94□□□□□ -0.82
CASC19-248ENST00000641674 RIMBP3Q9UFD9 1639 aa9.94□□□□□ -0.82
CASC19-248ENST00000641674 CHD1O14646 1710 aa9.93□□□□□ -0.82
CASC19-248ENST00000641674 CTHP32929 405 aa9.93□□□□□ -0.82
CASC19-248ENST00000641674 MTMR2Q13614 643 aa9.93□□□□□ -0.82
CASC19-248ENST00000641674 FOXJ1Q92949 421 aa9.93□□□□□ -0.82
CASC19-248ENST00000641674 TDRD9Q8NDG6 1382 aaKnown RBP9.92□□□□□ -0.82
CASC19-248ENST00000641674 ARID5BQ14865 1188 aa9.92□□□□□ -0.82
CASC19-248ENST00000641674 C6orf118Q5T5N4 469 aa9.92□□□□□ -0.82
CASC19-248ENST00000641674 RAD54L2Q9Y4B4 1467 aa9.92□□□□□ -0.82
CASC19-248ENST00000641674 VSIG8P0DPA2 414 aa9.91□□□□□ -0.82
CASC19-248ENST00000641674 CHMP7Q8WUX9 453 aaPredicted RBP9.91□□□□□ -0.82
CASC19-248ENST00000641674 ZIC2O95409 532 aaPredicted RBP9.9□□□□□ -0.82
CASC19-248ENST00000641674 DESI1Q6ICB0 168 aa9.9□□□□□ -0.82
CASC19-248ENST00000641674 CYB5RLQ6IPT4 315 aa9.9□□□□□ -0.82
CASC19-248ENST00000641674 ITPKCQ96DU7 683 aa9.9□□□□□ -0.82
CASC19-248ENST00000641674 WDR97A6NE52 1622 aa9.9□□□□□ -0.82
CASC19-248ENST00000641674 ARHGEF11O15085 1522 aa9.9□□□□□ -0.82
CASC19-248ENST00000641674 FGD5Q6ZNL6 1462 aa9.9□□□□□ -0.82
CASC19-248ENST00000641674 NR3C2P08235 984 aa9.89□□□□□ -0.83
CASC19-248ENST00000641674 FAM174AQ8TBP5 190 aa9.89□□□□□ -0.83
CASC19-248ENST00000641674 MAP10Q9P2G4 905 aa9.89□□□□□ -0.83
CASC19-248ENST00000641674 MAN1A2O60476 641 aa9.88□□□□□ -0.83
CASC19-248ENST00000641674 TTLL12Q14166 644 aaPredicted RBP9.88□□□□□ -0.83
CASC19-248ENST00000641674 PCDHB15Q9Y5E8 787 aa9.88□□□□□ -0.83
CASC19-248ENST00000641674 CUX1P39880 1505 aa9.88□□□□□ -0.83
CASC19-248ENST00000641674 SPDYE5A6NIY4 337 aa9.88□□□□□ -0.83
CASC19-248ENST00000641674 CFAP99D6REC4 459 aa9.88□□□□□ -0.83
CASC19-248ENST00000641674 C4orf48Q5BLP8 95 aa9.88□□□□□ -0.83
CASC19-248ENST00000641674 LYPD8Q6UX82 237 aa9.88□□□□□ -0.83
CASC19-248ENST00000641674 CDK15Q96Q40 435 aa9.88□□□□□ -0.83
CASC19-248ENST00000641674 GRIN2BQ13224 1484 aa9.86□□□□□ -0.83
CASC19-248ENST00000641674 PPFIA3O75145 1194 aa9.86□□□□□ -0.83
CASC19-248ENST00000641674 GIGYF2Q6Y7W6 1299 aaKnown RBP9.86□□□□□ -0.83
CASC19-248ENST00000641674 BEGAINQ9BUH8 593 aa9.86□□□□□ -0.83
CASC19-248ENST00000641674 MAGI1Q96QZ7 1491 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms