RNA–Protein interactions for RNA: ENST00000641635.1

SAMMSON-219, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

Gene SAMMSON, Length 1,162 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-219ENST00000641635 ZNF454Q8N9F8 522 aa9.76□□□□□ -0.85
SAMMSON-219ENST00000641635 DDX12PQ92771 950 aa9.76□□□□□ -0.85
SAMMSON-219ENST00000641635 UBA5Q9GZZ9 404 aa9.76□□□□□ -0.85
SAMMSON-219ENST00000641635 SH3BP1Q9Y3L3 701 aa9.76□□□□□ -0.85
SAMMSON-219ENST00000641635 GRXCR2A6NFK2 248 aa9.75□□□□□ -0.85
SAMMSON-219ENST00000641635 PPFIA4O75335 1185 aa9.75□□□□□ -0.85
SAMMSON-219ENST00000641635 MLLT3P42568 568 aaPredicted RBP9.75□□□□□ -0.85
SAMMSON-219ENST00000641635 PPP4R3BQ5MIZ7 849 aa9.75□□□□□ -0.85
SAMMSON-219ENST00000641635 DRC1Q96MC2 740 aa9.75□□□□□ -0.85
SAMMSON-219ENST00000641635 EPAS1Q99814 870 aa9.75□□□□□ -0.85
SAMMSON-219ENST00000641635 HDAC5Q9UQL6 1122 aa9.75□□□□□ -0.85
SAMMSON-219ENST00000641635 LONRF3Q496Y0 759 aa9.74□□□□□ -0.85
SAMMSON-219ENST00000641635 KRBA2Q6ZNG9 492 aa9.74□□□□□ -0.85
SAMMSON-219ENST00000641635 MORC4Q8TE76 937 aa9.74□□□□□ -0.85
SAMMSON-219ENST00000641635 GRIN2BQ13224 1484 aa9.73□□□□□ -0.85
SAMMSON-219ENST00000641635 CCER2I3L3R5 266 aa9.73□□□□□ -0.85
SAMMSON-219ENST00000641635 PCDHGA10Q9Y5H3 936 aa9.73□□□□□ -0.85
SAMMSON-219ENST00000641635 HMGB1P1B2RPK0 211 aaPredicted RBP9.72□□□□□ -0.85
SAMMSON-219ENST00000641635 TYW1BQ6NUM6 668 aa9.72□□□□□ -0.85
SAMMSON-219ENST00000641635 GPIHBP1Q8IV16 184 aa9.72□□□□□ -0.85
SAMMSON-219ENST00000641635 CCER1Q8TC90 406 aaPredicted RBP9.72□□□□□ -0.85
SAMMSON-219ENST00000641635 CCDC97Q96F63 343 aaPredicted RBP9.72□□□□□ -0.85
SAMMSON-219ENST00000641635 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.72□□□□□ -0.85
SAMMSON-219ENST00000641635 SERPINA10Q9UK55 444 aa9.72□□□□□ -0.85
SAMMSON-219ENST00000641635 RRP9O43818 475 aaKnown RBP9.71□□□□□ -0.86
SAMMSON-219ENST00000641635 ONECUT3O60422 494 aaPredicted RBP9.71□□□□□ -0.86
SAMMSON-219ENST00000641635 RAB11FIP3O75154 756 aa9.71□□□□□ -0.86
SAMMSON-219ENST00000641635 ADGRD1Q6QNK2 874 aa9.71□□□□□ -0.86
SAMMSON-219ENST00000641635 ZNF662Q6ZS27 426 aa9.71□□□□□ -0.86
SAMMSON-219ENST00000641635 ZDHHC16Q969W1 377 aa9.71□□□□□ -0.86
SAMMSON-219ENST00000641635 TRIM44Q96DX7 344 aaPredicted RBP9.71□□□□□ -0.86
SAMMSON-219ENST00000641635 ZNF777Q9ULD5 760 aaPredicted RBP9.71□□□□□ -0.86
SAMMSON-219ENST00000641635 SOGA1O94964 1423 aa9.71□□□□□ -0.86
SAMMSON-219ENST00000641635 PRG4Q92954 1404 aaPredicted RBP9.71□□□□□ -0.86
SAMMSON-219ENST00000641635 TEX14Q8IWB6 1497 aa9.71□□□□□ -0.86
SAMMSON-219ENST00000641635 RAD54L2Q9Y4B4 1467 aa9.71□□□□□ -0.86
SAMMSON-219ENST00000641635 ZMYND10O75800 440 aa9.7□□□□□ -0.86
SAMMSON-219ENST00000641635 ANP32BQ92688 251 aaKnown RBP9.7□□□□□ -0.86
SAMMSON-219ENST00000641635 KDM4CQ9H3R0 1056 aa9.7□□□□□ -0.86
SAMMSON-219ENST00000641635 LTBP4Q8N2S1 1624 aa9.7□□□□□ -0.86
SAMMSON-219ENST00000641635 MAP4K4O95819 1239 aaPredicted RBP9.69□□□□□ -0.86
SAMMSON-219ENST00000641635 OSBPP22059 807 aa9.69□□□□□ -0.86
SAMMSON-219ENST00000641635 CALRP27797 417 aaKnown RBP9.69□□□□□ -0.86
SAMMSON-219ENST00000641635 PIP4K2BP78356 416 aa9.69□□□□□ -0.86
SAMMSON-219ENST00000641635 SREK1Q8WXA9 508 aaKnown RBP9.69□□□□□ -0.86
SAMMSON-219ENST00000641635 ADAMTSL3P82987 1691 aa9.68□□□□□ -0.86
SAMMSON-219ENST00000641635 NRDCO43847 1150 aa9.68□□□□□ -0.86
SAMMSON-219ENST00000641635 PEX14O75381 377 aa9.68□□□□□ -0.86
SAMMSON-219ENST00000641635 POTEAQ6S8J7 498 aa9.68□□□□□ -0.86
SAMMSON-219ENST00000641635 KCNH8Q96L42 1107 aa9.68□□□□□ -0.86
SAMMSON-219ENST00000641635 BCL2L12Q9HB09 334 aa9.68□□□□□ -0.86
SAMMSON-219ENST00000641635 PRDM4Q9UKN5 801 aa9.68□□□□□ -0.86
SAMMSON-219ENST00000641635 PPRC1Q5VV67 1664 aaKnown RBP9.67□□□□□ -0.86
SAMMSON-219ENST00000641635 POLA1P09884 1462 aaPredicted RBP9.67□□□□□ -0.86
SAMMSON-219ENST00000641635 TK2O00142 265 aa9.67□□□□□ -0.86
SAMMSON-219ENST00000641635 ARID4AP29374 1257 aaPredicted RBP9.67□□□□□ -0.86
SAMMSON-219ENST00000641635 PSEN2P49810 448 aa9.67□□□□□ -0.86
SAMMSON-219ENST00000641635 ZNF830Q96NB3 372 aaPredicted RBP9.67□□□□□ -0.86
SAMMSON-219ENST00000641635 TSPAN18Q96SJ8 248 aa9.67□□□□□ -0.86
SAMMSON-219ENST00000641635 ADAM33Q9BZ11 813 aa9.67□□□□□ -0.86
SAMMSON-219ENST00000641635 KIAA1522Q9P206 1035 aaPredicted RBP9.67□□□□□ -0.86
SAMMSON-219ENST00000641635 EXOC5O00471 708 aa9.66□□□□□ -0.86
SAMMSON-219ENST00000641635 ANP32CO43423 234 aa9.66□□□□□ -0.86
SAMMSON-219ENST00000641635 IRX3P78415 501 aaPredicted RBP9.66□□□□□ -0.86
SAMMSON-219ENST00000641635 CALD1Q05682 793 aaKnown RBP9.66□□□□□ -0.86
SAMMSON-219ENST00000641635 EN1Q05925 392 aaPredicted RBP9.66□□□□□ -0.86
SAMMSON-219ENST00000641635 DMRTA1Q5VZB9 504 aa9.66□□□□□ -0.86
SAMMSON-219ENST00000641635 PPARGC1BQ86YN6 1023 aaKnown RBP9.66□□□□□ -0.86
SAMMSON-219ENST00000641635 MAGEC2Q9UBF1 373 aaPredicted RBP9.66□□□□□ -0.86
SAMMSON-219ENST00000641635 HCSTQ9UBK5 93 aa9.66□□□□□ -0.86
SAMMSON-219ENST00000641635 NUTM2FA1L443 756 aa9.65□□□□□ -0.86
SAMMSON-219ENST00000641635 ZFYVE27Q5T4F4 411 aa9.65□□□□□ -0.86
SAMMSON-219ENST00000641635 CLEC4GQ6UXB4 293 aa9.65□□□□□ -0.86
SAMMSON-219ENST00000641635 SMC5Q8IY18 1101 aa9.65□□□□□ -0.86
SAMMSON-219ENST00000641635 RBM33Q96EV2 1170 aaKnown RBP9.65□□□□□ -0.86
SAMMSON-219ENST00000641635 GLI2P10070 1586 aa9.65□□□□□ -0.86
SAMMSON-219ENST00000641635 MAP3K7O43318 606 aa9.64□□□□□ -0.87
SAMMSON-219ENST00000641635 CREB3O43889 395 aa9.64□□□□□ -0.87
SAMMSON-219ENST00000641635 APPP05067 770 aa9.64□□□□□ -0.87
SAMMSON-219ENST00000641635 SSFA2P28290 1259 aa9.64□□□□□ -0.87
SAMMSON-219ENST00000641635 KCNA1Q09470 495 aa9.64□□□□□ -0.87
SAMMSON-219ENST00000641635 GIMAP6Q6P9H5 292 aa9.64□□□□□ -0.87
SAMMSON-219ENST00000641635 PNMA2Q9UL42 364 aa9.64□□□□□ -0.87
SAMMSON-219ENST00000641635 DNMBPQ6XZF7 1577 aa9.63□□□□□ -0.87
SAMMSON-219ENST00000641635 GOLIM4O00461 696 aa9.63□□□□□ -0.87
SAMMSON-219ENST00000641635 FCHSD2O94868 740 aa9.63□□□□□ -0.87
SAMMSON-219ENST00000641635 LIG1P18858 919 aa9.63□□□□□ -0.87
SAMMSON-219ENST00000641635 PTPREP23469 700 aa9.63□□□□□ -0.87
SAMMSON-219ENST00000641635 PRIM1P49642 420 aaKnown RBP9.63□□□□□ -0.87
SAMMSON-219ENST00000641635 TSR1Q2NL82 804 aaKnown RBP9.63□□□□□ -0.87
SAMMSON-219ENST00000641635 WDR78Q5VTH9 848 aa9.63□□□□□ -0.87
SAMMSON-219ENST00000641635 EGFL6Q8IUX8 553 aa9.63□□□□□ -0.87
SAMMSON-219ENST00000641635 CACTIN-AS1Q8N1I8 211 aa9.63□□□□□ -0.87
SAMMSON-219ENST00000641635 MKL1Q969V6 931 aa9.63□□□□□ -0.87
SAMMSON-219ENST00000641635 KCNK17Q96T54 332 aa9.63□□□□□ -0.87
SAMMSON-219ENST00000641635 KIF21BO75037 1637 aa9.63□□□□□ -0.87
SAMMSON-219ENST00000641635 PLB1Q6P1J6 1458 aa9.62□□□□□ -0.87
SAMMSON-219ENST00000641635 RBM47A0AV96 593 aaKnown RBP9.62□□□□□ -0.87
SAMMSON-219ENST00000641635 TOM1O60784 492 aa9.62□□□□□ -0.87
SAMMSON-219ENST00000641635 APLP1P51693 650 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms