RNA–Protein interactions for RNA: ENST00000641357.1

CASC19-223, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 1,069 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-223	ENST00000641357	SMCP	P49901	116 aa	Predicted RBP	11.54	□□□□□ -0.56
CASC19-223	ENST00000641357		Q3C1V9	767 aa		11.54	□□□□□ -0.56
CASC19-223	ENST00000641357	CTC1	Q2NKJ3	1217 aa		11.53	□□□□□ -0.56
CASC19-223	ENST00000641357	CYP4X1	Q8N118	509 aa		11.53	□□□□□ -0.56
CASC19-223	ENST00000641357	FMN1	Q68DA7	1419 aa		11.52	□□□□□ -0.56
CASC19-223	ENST00000641357	RRBP1	Q9P2E9	1410 aa	Known RBP	11.52	□□□□□ -0.56
CASC19-223	ENST00000641357	ERCC6	Q03468	1493 aa		11.52	□□□□□ -0.56
CASC19-223	ENST00000641357	DACH1	Q9UI36	760 aa		11.52	□□□□□ -0.57
CASC19-223	ENST00000641357	CASKIN1	Q8WXD9	1431 aa		11.52	□□□□□ -0.57
CASC19-223	ENST00000641357	PCF11	O94913	1555 aa	Known RBP	11.51	□□□□□ -0.57
CASC19-223	ENST00000641357	WNT7A	O00755	349 aa		11.51	□□□□□ -0.57
CASC19-223	ENST00000641357	IRF6	O14896	467 aa		11.51	□□□□□ -0.57
CASC19-223	ENST00000641357	DXO	O77932	396 aa	Known RBP	11.51	□□□□□ -0.57
CASC19-223	ENST00000641357	KDM4A	O75164	1064 aa		11.5	□□□□□ -0.57
CASC19-223	ENST00000641357	INSM1	Q01101	510 aa	Predicted RBP	11.5	□□□□□ -0.57
CASC19-223	ENST00000641357	TRIM32	Q13049	653 aa		11.5	□□□□□ -0.57
CASC19-223	ENST00000641357	EIF4G3	O43432	1585 aa	Known RBP	11.5	□□□□□ -0.57
CASC19-223	ENST00000641357	ZBTB24	O43167	697 aa	Predicted RBP	11.49	□□□□□ -0.57
CASC19-223	ENST00000641357	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.49	□□□□□ -0.57
CASC19-223	ENST00000641357	IQGAP2	Q13576	1575 aa		11.49	□□□□□ -0.57
CASC19-223	ENST00000641357	AXIN1	O15169	862 aa		11.48	□□□□□ -0.57
CASC19-223	ENST00000641357	USP46	P62068	366 aa		11.48	□□□□□ -0.57
CASC19-223	ENST00000641357	USB1	Q9BQ65	265 aa	Known RBP	11.48	□□□□□ -0.57
CASC19-223	ENST00000641357	LRRC9	Q6ZRR7	1453 aa		11.48	□□□□□ -0.57
CASC19-223	ENST00000641357	UGGT2	Q9NYU1	1516 aa		11.47	□□□□□ -0.57
CASC19-223	ENST00000641357	SNAPC4	Q5SXM2	1469 aa		11.47	□□□□□ -0.57
CASC19-223	ENST00000641357	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.47	□□□□□ -0.57
CASC19-223	ENST00000641357	WIPF1	O43516	503 aa		11.47	□□□□□ -0.57
CASC19-223	ENST00000641357	RANGAP1	P46060	587 aa	Predicted RBP	11.47	□□□□□ -0.57
CASC19-223	ENST00000641357	FHOD3	Q2V2M9	1422 aa		11.46	□□□□□ -0.57
CASC19-223	ENST00000641357	SMPD1	P17405	629 aa		11.46	□□□□□ -0.57
CASC19-223	ENST00000641357	HAP1	P54257	671 aa	Predicted RBP	11.46	□□□□□ -0.57
CASC19-223	ENST00000641357	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.45	□□□□□ -0.58
CASC19-223	ENST00000641357	SNIP1	Q8TAD8	396 aa	Known RBP	11.45	□□□□□ -0.58
CASC19-223	ENST00000641357	GMPR2	Q9P2T1	348 aa	Known RBP	11.45	□□□□□ -0.58
CASC19-223	ENST00000641357	HOXA2	O43364	376 aa		11.44	□□□□□ -0.58
CASC19-223	ENST00000641357	MDM2	Q00987	491 aa	Predicted RBP	11.44	□□□□□ -0.58
CASC19-223	ENST00000641357	NFX1	Q12986	1120 aa	Known RBP	11.44	□□□□□ -0.58
CASC19-223	ENST00000641357	KANK4	Q5T7N3	995 aa	Predicted RBP	11.44	□□□□□ -0.58
CASC19-223	ENST00000641357	HLA-C	Q95604	372 aa		11.44	□□□□□ -0.58
CASC19-223	ENST00000641357	KIAA0586	Q9BVV6	1533 aa		11.44	□□□□□ -0.58
CASC19-223	ENST00000641357	TTC24	A2A3L6	582 aa	Predicted RBP	11.43	□□□□□ -0.58
CASC19-223	ENST00000641357	MRGPRX2	Q96LB1	330 aa		11.43	□□□□□ -0.58
CASC19-223	ENST00000641357	C11orf95	C9JLR9	678 aa	Predicted RBP	11.42	□□□□□ -0.58
CASC19-223	ENST00000641357	GRIN2A	Q12879	1464 aa		11.42	□□□□□ -0.58
CASC19-223	ENST00000641357	CCNB3	Q8WWL7	1395 aa		11.41	□□□□□ -0.58
CASC19-223	ENST00000641357	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
CASC19-223	ENST00000641357	SYNJ2	O15056	1496 aa		11.41	□□□□□ -0.58
CASC19-223	ENST00000641357	CCDC18	Q5T9S5	1454 aa		11.41	□□□□□ -0.58
CASC19-223	ENST00000641357	CCDC102A	Q96A19	550 aa		11.41	□□□□□ -0.58
CASC19-223	ENST00000641357	REPIN1	Q9BWE0	567 aa	Known RBP	11.41	□□□□□ -0.58
CASC19-223	ENST00000641357	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.4	□□□□□ -0.58
CASC19-223	ENST00000641357	HECW1	Q76N89	1606 aa		11.4	□□□□□ -0.58
CASC19-223	ENST00000641357	LOC100996750	A0A140TA64	210 aa		11.4	□□□□□ -0.58
CASC19-223	ENST00000641357	KRTAP4-6	Q9BYQ5	205 aa		11.4	□□□□□ -0.58
CASC19-223	ENST00000641357	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.4	□□□□□ -0.58
CASC19-223	ENST00000641357	WNT7B	P56706	349 aa		11.39	□□□□□ -0.59
CASC19-223	ENST00000641357	CCER1	Q8TC90	406 aa	Predicted RBP	11.39	□□□□□ -0.59
CASC19-223	ENST00000641357	GPCPD1	Q9NPB8	672 aa		11.39	□□□□□ -0.59
CASC19-223	ENST00000641357	CLSPN	Q9HAW4	1339 aa		11.38	□□□□□ -0.59
CASC19-223	ENST00000641357		J3QL48	77 aa		11.38	□□□□□ -0.59
CASC19-223	ENST00000641357	TULP1	O00294	542 aa	Predicted RBP	11.38	□□□□□ -0.59
CASC19-223	ENST00000641357	SKOR1	P84550	965 aa		11.38	□□□□□ -0.59
CASC19-223	ENST00000641357	EHBP1L1	Q8N3D4	1523 aa		11.38	□□□□□ -0.59
CASC19-223	ENST00000641357	LRRIQ1	Q96JM4	1722 aa		11.38	□□□□□ -0.59
CASC19-223	ENST00000641357	CLCN1	P35523	988 aa		11.37	□□□□□ -0.59
CASC19-223	ENST00000641357	KIAA0556	O60303	1618 aa		11.37	□□□□□ -0.59
CASC19-223	ENST00000641357	NUP160	Q12769	1436 aa		11.36	□□□□□ -0.59
CASC19-223	ENST00000641357	JUND	P17535	347 aa		11.36	□□□□□ -0.59
CASC19-223	ENST00000641357	ATP13A2	Q9NQ11	1180 aa		11.36	□□□□□ -0.59
CASC19-223	ENST00000641357	GUCA2A	Q02747	115 aa		11.35	□□□□□ -0.59
CASC19-223	ENST00000641357	VSIG10	Q8N0Z9	540 aa		11.35	□□□□□ -0.59
CASC19-223	ENST00000641357	RC3H1	Q5TC82	1133 aa	Known RBP	11.34	□□□□□ -0.59
CASC19-223	ENST00000641357	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.34	□□□□□ -0.59
CASC19-223	ENST00000641357	ARHGEF11	O15085	1522 aa		11.34	□□□□□ -0.59
CASC19-223	ENST00000641357	DISP1	Q96F81	1524 aa		11.34	□□□□□ -0.59
CASC19-223	ENST00000641357	CEP170	Q5SW79	1584 aa		11.33	□□□□□ -0.6
CASC19-223	ENST00000641357	PHLDB1	Q86UU1	1377 aa		11.33	□□□□□ -0.6
CASC19-223	ENST00000641357	RETREG3	Q86VR2	466 aa		11.33	□□□□□ -0.6
CASC19-223	ENST00000641357	CCDC24	Q8N4L8	307 aa		11.32	□□□□□ -0.6
CASC19-223	ENST00000641357	HPS1	Q92902	700 aa		11.32	□□□□□ -0.6
CASC19-223	ENST00000641357	TRIM47	Q96LD4	638 aa		11.32	□□□□□ -0.6
CASC19-223	ENST00000641357	SYMPK	Q92797	1274 aa	Known RBP	11.31	□□□□□ -0.6
CASC19-223	ENST00000641357	MTUS2	Q5JR59	1369 aa		11.3	□□□□□ -0.6
CASC19-223	ENST00000641357	EPRS	P07814	1512 aa	Known RBP	11.3	□□□□□ -0.6
CASC19-223	ENST00000641357	FGD6	Q6ZV73	1430 aa		11.29	□□□□□ -0.6
CASC19-223	ENST00000641357	SENP2	Q9HC62	589 aa		11.29	□□□□□ -0.6
CASC19-223	ENST00000641357	PCDHGC3	Q9UN70	934 aa		11.29	□□□□□ -0.6
CASC19-223	ENST00000641357	RAPGEF6	Q8TEU7	1601 aa		11.28	□□□□□ -0.6
CASC19-223	ENST00000641357	SIAH2	O43255	324 aa		11.28	□□□□□ -0.6
CASC19-223	ENST00000641357	SNRPB	P14678	240 aa	Known RBP	11.28	□□□□□ -0.6
CASC19-223	ENST00000641357	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.28	□□□□□ -0.6
CASC19-223	ENST00000641357	NUDT12	Q9BQG2	462 aa		11.28	□□□□□ -0.6
CASC19-223	ENST00000641357	MYOM3	Q5VTT5	1437 aa		11.27	□□□□□ -0.6
CASC19-223	ENST00000641357	NCOA2	Q15596	1464 aa		11.27	□□□□□ -0.6
CASC19-223	ENST00000641357	LCE2C	Q5TA81	110 aa		11.27	□□□□□ -0.61
CASC19-223	ENST00000641357	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
CASC19-223	ENST00000641357	NUTM1	Q86Y26	1132 aa		11.27	□□□□□ -0.61
CASC19-223	ENST00000641357	CARMIL2	Q6F5E8	1435 aa		11.26	□□□□□ -0.61
CASC19-223	ENST00000641357	TERT	O14746	1132 aa	Known RBP	11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms