RNA–Protein interactions for RNA: ENST00000640969.1

KCNMA1-293, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-293ENST00000640969 MTHFSP49914 203 aa23.57■■□□□ 1.36
KCNMA1-293ENST00000640969 PDCP20941 246 aa23.56■■□□□ 1.36
KCNMA1-293ENST00000640969 BRPF1P55201 1214 aaPredicted RBP23.56■■□□□ 1.36
KCNMA1-293ENST00000640969 IKQ13123 557 aaPredicted RBP23.56■■□□□ 1.36
KCNMA1-293ENST00000640969 CCDC191Q8NCU4 936 aa23.56■■□□□ 1.36
KCNMA1-293ENST00000640969 CEBPZQ03701 1054 aaKnown RBP23.55■■□□□ 1.36
KCNMA1-293ENST00000640969 SPC24Q8NBT2 197 aa23.55■■□□□ 1.36
KCNMA1-293ENST00000640969 CDK5RAP3Q96JB5 506 aa23.55■■□□□ 1.36
KCNMA1-293ENST00000640969 EXOSC9Q06265 439 aaKnown RBP23.55■■□□□ 1.36
KCNMA1-293ENST00000640969 STAC3Q96MF2 364 aa23.54■■□□□ 1.36
KCNMA1-293ENST00000640969 RDXP35241 583 aaKnown RBP23.54■■□□□ 1.36
KCNMA1-293ENST00000640969 STK38Q15208 465 aa23.54■■□□□ 1.36
KCNMA1-293ENST00000640969 KRI1Q8N9T8 703 aaKnown RBP23.54■■□□□ 1.36
KCNMA1-293ENST00000640969 FGD6Q6ZV73 1430 aa23.54■■□□□ 1.36
KCNMA1-293ENST00000640969 BRPF3Q9ULD4 1205 aa23.54■■□□□ 1.36
KCNMA1-293ENST00000640969 GCC1Q96CN9 775 aa23.54■■□□□ 1.36
KCNMA1-293ENST00000640969 CUX1P39880 1505 aa23.53■■□□□ 1.36
KCNMA1-293ENST00000640969 TXLNAP40222 546 aa23.53■■□□□ 1.36
KCNMA1-293ENST00000640969 TMEM132EQ6IEE7 984 aa23.53■■□□□ 1.36
KCNMA1-293ENST00000640969 CCDC66A2RUB6 948 aa23.52■■□□□ 1.36
KCNMA1-293ENST00000640969 GAS2L2Q8NHY3 880 aa23.52■■□□□ 1.36
KCNMA1-293ENST00000640969 PPP2R1AP30153 589 aa23.52■■□□□ 1.35
KCNMA1-293ENST00000640969 NLRP6P59044 892 aa23.52■■□□□ 1.35
KCNMA1-293ENST00000640969 WASHC2AQ641Q2 1341 aa23.51■■□□□ 1.35
KCNMA1-293ENST00000640969 ERC1Q8IUD2 1116 aa23.51■■□□□ 1.35
KCNMA1-293ENST00000640969 NOB1Q9ULX3 412 aaKnown RBP23.51■■□□□ 1.35
KCNMA1-293ENST00000640969 TWISTNBQ3B726 338 aaPredicted RBP23.51■■□□□ 1.35
KCNMA1-293ENST00000640969 ZNF644Q9H582 1327 aaPredicted RBP23.51■■□□□ 1.35
KCNMA1-293ENST00000640969 ATF3P18847 181 aa23.5■■□□□ 1.35
KCNMA1-293ENST00000640969 GNAI2P04899 355 aa23.5■■□□□ 1.35
KCNMA1-293ENST00000640969 PRKAR2BP31323 418 aa23.5■■□□□ 1.35
KCNMA1-293ENST00000640969 RBM10P98175 930 aaKnown RBP23.5■■□□□ 1.35
KCNMA1-293ENST00000640969 FAM177BA6PVY3 158 aa23.5■■□□□ 1.35
KCNMA1-293ENST00000640969 AXDND1Q5T1B0 1012 aaPredicted RBP23.5■■□□□ 1.35
KCNMA1-293ENST00000640969 HMGN5P82970 282 aaKnown RBP23.5■■□□□ 1.35
KCNMA1-293ENST00000640969 TTC39AQ5SRH9 613 aa23.5■■□□□ 1.35
KCNMA1-293ENST00000640969 PIP4K2AP48426 406 aaPredicted RBP23.49■■□□□ 1.35
KCNMA1-293ENST00000640969 SLC3A2P08195 630 aaKnown RBP23.49■■□□□ 1.35
KCNMA1-293ENST00000640969 LEKR1Q6ZMV7 388 aa23.49■■□□□ 1.35
KCNMA1-293ENST00000640969 SERPINC1P01008 464 aa23.48■■□□□ 1.35
KCNMA1-293ENST00000640969 KIF6Q6ZMV9 814 aa23.48■■□□□ 1.35
KCNMA1-293ENST00000640969 CCAR1Q8IX12 1150 aaKnown RBP23.48■■□□□ 1.35
KCNMA1-293ENST00000640969 KRT18P05783 430 aaKnown RBP23.48■■□□□ 1.35
KCNMA1-293ENST00000640969 KLHL34Q8N239 644 aa23.48■■□□□ 1.35
KCNMA1-293ENST00000640969 STK3Q13188 491 aa23.47■■□□□ 1.35
KCNMA1-293ENST00000640969 TSPYL1Q9H0U9 437 aa23.47■■□□□ 1.35
KCNMA1-293ENST00000640969 CYP46A1Q9Y6A2 500 aa23.47■■□□□ 1.35
KCNMA1-293ENST00000640969 CCDC192P0DO97 292 aa23.47■■□□□ 1.35
KCNMA1-293ENST00000640969 SYCP1Q15431 976 aa23.46■■□□□ 1.35
KCNMA1-293ENST00000640969 TMEM132AQ24JP5 1023 aa23.46■■□□□ 1.35
KCNMA1-293ENST00000640969 AEBP1Q8IUX7 1158 aa23.46■■□□□ 1.35
KCNMA1-293ENST00000640969 PDE3AQ14432 1141 aa23.45■■□□□ 1.35
KCNMA1-293ENST00000640969 TNMDQ9H2S6 317 aa23.45■■□□□ 1.35
KCNMA1-293ENST00000640969 ZNHIT6Q9NWK9 470 aaKnown RBP23.45■■□□□ 1.35
KCNMA1-293ENST00000640969 FANCD2Q9BXW9 1451 aa23.45■■□□□ 1.34
KCNMA1-293ENST00000640969 CCDC158Q5M9N0 1113 aa23.45■■□□□ 1.34
KCNMA1-293ENST00000640969 JMYQ8N9B5 988 aa23.45■■□□□ 1.34
KCNMA1-293ENST00000640969 TSR2Q969E8 191 aaKnown RBP23.44■■□□□ 1.34
KCNMA1-293ENST00000640969 ANKRD50Q9ULJ7 1429 aa23.44■■□□□ 1.34
KCNMA1-293ENST00000640969 PLEKHO1Q53GL0 409 aaPredicted RBP23.44■■□□□ 1.34
KCNMA1-293ENST00000640969 CYB5RLQ6IPT4 315 aa23.44■■□□□ 1.34
KCNMA1-293ENST00000640969 BCAR3O75815 825 aa23.43■■□□□ 1.34
KCNMA1-293ENST00000640969 K7ELQ4 463 aaPredicted RBP23.43■■□□□ 1.34
KCNMA1-293ENST00000640969 PPFIBP1Q86W92 1011 aa23.43■■□□□ 1.34
KCNMA1-293ENST00000640969 CNNM1Q9NRU3 951 aa23.43■■□□□ 1.34
KCNMA1-293ENST00000640969 CT47B1P0C2W7 299 aaPredicted RBP23.42■■□□□ 1.34
KCNMA1-293ENST00000640969 ANKRD1Q15327 319 aa23.42■■□□□ 1.34
KCNMA1-293ENST00000640969 MAP4K4O95819 1239 aaPredicted RBP23.42■■□□□ 1.34
KCNMA1-293ENST00000640969 WDR33Q9C0J8 1336 aaKnown RBP23.42■■□□□ 1.34
KCNMA1-293ENST00000640969 SLC4A2P04920 1241 aa23.42■■□□□ 1.34
KCNMA1-293ENST00000640969 LRRCC1Q9C099 1032 aa23.42■■□□□ 1.34
KCNMA1-293ENST00000640969 DACH1Q9UI36 760 aa23.42■■□□□ 1.34
KCNMA1-293ENST00000640969 ABTB2Q8N961 1025 aa23.41■■□□□ 1.34
KCNMA1-293ENST00000640969 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.41■■□□□ 1.34
KCNMA1-293ENST00000640969 ERLIN2O94905 339 aa23.41■■□□□ 1.34
KCNMA1-293ENST00000640969 ME1P48163 572 aa23.41■■□□□ 1.34
KCNMA1-293ENST00000640969 RBM42Q9BTD8 480 aaKnown RBP23.41■■□□□ 1.34
KCNMA1-293ENST00000640969 RRBP1Q9P2E9 1410 aaKnown RBP23.41■■□□□ 1.34
KCNMA1-293ENST00000640969 DHX8Q14562 1220 aaKnown RBP23.4■■□□□ 1.34
KCNMA1-293ENST00000640969 FYCO1Q9BQS8 1478 aa23.4■■□□□ 1.34
KCNMA1-293ENST00000640969 MPNDQ8N594 471 aa23.4■■□□□ 1.34
KCNMA1-293ENST00000640969 PRDM2Q13029 1718 aa23.39■■□□□ 1.34
KCNMA1-293ENST00000640969 CCDC112Q8NEF3 446 aa23.39■■□□□ 1.34
KCNMA1-293ENST00000640969 GRPEL1Q9HAV7 217 aa23.39■■□□□ 1.34
KCNMA1-293ENST00000640969 GPRASP1Q5JY77 1395 aa23.39■■□□□ 1.33
KCNMA1-293ENST00000640969 GOLGA6L10A6NI86 522 aa23.39■■□□□ 1.33
KCNMA1-293ENST00000640969 CCT4P50991 539 aaKnown RBP23.39■■□□□ 1.33
KCNMA1-293ENST00000640969 STK11IPQ8N1F8 1099 aa23.39■■□□□ 1.33
KCNMA1-293ENST00000640969 DEF6Q9H4E7 631 aa23.39■■□□□ 1.33
KCNMA1-293ENST00000640969 CFAP70Q5T0N1 1121 aa23.38■■□□□ 1.33
KCNMA1-293ENST00000640969 SMG6Q86US8 1419 aaKnown RBP23.38■■□□□ 1.33
KCNMA1-293ENST00000640969 CCDC181Q5TID7 509 aa23.38■■□□□ 1.33
KCNMA1-293ENST00000640969 SIL1Q9H173 461 aa23.38■■□□□ 1.33
KCNMA1-293ENST00000640969 AKNAQ7Z591 1439 aa23.38■■□□□ 1.33
KCNMA1-293ENST00000640969 KRT85P78386 507 aa23.38■■□□□ 1.33
KCNMA1-293ENST00000640969 TRIM22Q8IYM9 498 aa23.38■■□□□ 1.33
KCNMA1-293ENST00000640969 CCDC69A6NI79 296 aa23.37■■□□□ 1.33
KCNMA1-293ENST00000640969 NEFHP12036 1026 aa23.37■■□□□ 1.33
KCNMA1-293ENST00000640969 STIM1Q13586 685 aa23.37■■□□□ 1.33
KCNMA1-293ENST00000640969 GNL3LQ9NVN8 582 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms