RNA–Protein interactions for RNA: ENST00000640735.1

PAX6-277, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-277ENST00000640735 SHPRHQ149N8 1683 aa19.73■□□□□ 0.75
PAX6-277ENST00000640735 VASPP50552 380 aaPredicted RBP19.72■□□□□ 0.75
PAX6-277ENST00000640735 CCDC146Q8IYE0 955 aa19.72■□□□□ 0.75
PAX6-277ENST00000640735 PAK3O75914 559 aaPredicted RBP19.72■□□□□ 0.75
PAX6-277ENST00000640735 ARHGEF28Q8N1W1 1705 aaKnown RBP19.72■□□□□ 0.75
PAX6-277ENST00000640735 NRXN3Q9Y4C0 1643 aa19.71■□□□□ 0.75
PAX6-277ENST00000640735 ZBTB7CA1YPR0 619 aa19.71■□□□□ 0.75
PAX6-277ENST00000640735 SPINK5Q9NQ38 1064 aaPredicted RBP19.7■□□□□ 0.74
PAX6-277ENST00000640735 CENPQQ7L2Z9 268 aaPredicted RBP19.69■□□□□ 0.74
PAX6-277ENST00000640735 CHMP4AQ9BY43 222 aa19.69■□□□□ 0.74
PAX6-277ENST00000640735 SLC12A5Q9H2X9 1139 aa19.69■□□□□ 0.74
PAX6-277ENST00000640735 TMEM132EQ6IEE7 984 aa19.68■□□□□ 0.74
PAX6-277ENST00000640735 TULP4Q9NRJ4 1543 aa19.68■□□□□ 0.74
PAX6-277ENST00000640735 MORC1Q86VD1 984 aa19.67■□□□□ 0.74
PAX6-277ENST00000640735 NSD2O96028 1365 aa19.67■□□□□ 0.74
PAX6-277ENST00000640735 ADAMTS13Q76LX8 1427 aa19.67■□□□□ 0.74
PAX6-277ENST00000640735 ZBTB47Q9UFB7 747 aaPredicted RBP19.66■□□□□ 0.74
PAX6-277ENST00000640735 ALKQ9UM73 1620 aa19.66■□□□□ 0.74
PAX6-277ENST00000640735 EVC2Q86UK5 1308 aa19.66■□□□□ 0.74
PAX6-277ENST00000640735 DIP2AQ14689 1571 aa19.66■□□□□ 0.74
PAX6-277ENST00000640735 SLC26A8Q96RN1 970 aa19.66■□□□□ 0.74
PAX6-277ENST00000640735 IQSEC2Q5JU85 1478 aa19.65■□□□□ 0.74
PAX6-277ENST00000640735 ANKRD36BQ8N2N9 1353 aa19.65■□□□□ 0.74
PAX6-277ENST00000640735 CGNL1Q0VF96 1302 aa19.65■□□□□ 0.74
PAX6-277ENST00000640735 SETD1AO15047 1707 aaKnown RBP19.65■□□□□ 0.74
PAX6-277ENST00000640735 WWC1Q8IX03 1113 aa19.64■□□□□ 0.73
PAX6-277ENST00000640735 NINLQ9Y2I6 1382 aa19.63■□□□□ 0.73
PAX6-277ENST00000640735 RUNDC1Q96C34 613 aa19.63■□□□□ 0.73
PAX6-277ENST00000640735 DMRT2Q9Y5R5 561 aa19.63■□□□□ 0.73
PAX6-277ENST00000640735 TBX22Q9Y458 520 aa19.61■□□□□ 0.73
PAX6-277ENST00000640735 PDE3AQ14432 1141 aa19.6■□□□□ 0.73
PAX6-277ENST00000640735 CCDC27Q2M243 656 aa19.6■□□□□ 0.73
PAX6-277ENST00000640735 HMGB1P09429 215 aaKnown RBP19.59■□□□□ 0.73
PAX6-277ENST00000640735 WDR63Q8IWG1 891 aa19.59■□□□□ 0.73
PAX6-277ENST00000640735 METP08581 1390 aa19.59■□□□□ 0.73
PAX6-277ENST00000640735 BCAR3O75815 825 aa19.58■□□□□ 0.73
PAX6-277ENST00000640735 MTHFSP49914 203 aa19.57■□□□□ 0.72
PAX6-277ENST00000640735 CFAP53Q96M91 514 aa19.57■□□□□ 0.72
PAX6-277ENST00000640735 NECTIN2Q92692 538 aa19.56■□□□□ 0.72
PAX6-277ENST00000640735 TCP11L2Q8N4U5 519 aa19.55■□□□□ 0.72
PAX6-277ENST00000640735 ABCC11Q96J66 1382 aa19.55■□□□□ 0.72
PAX6-277ENST00000640735 PIK3R4Q99570 1358 aa19.55■□□□□ 0.72
PAX6-277ENST00000640735 HSP90B1P14625 803 aaKnown RBP19.55■□□□□ 0.72
PAX6-277ENST00000640735 SKAP1Q86WV1 359 aa19.55■□□□□ 0.72
PAX6-277ENST00000640735 CHD2O14647 1828 aaKnown RBP19.55■□□□□ 0.72
PAX6-277ENST00000640735 ADGRB2O60241 1585 aa19.54■□□□□ 0.72
PAX6-277ENST00000640735 PTPRUQ92729 1446 aa19.54■□□□□ 0.72
PAX6-277ENST00000640735 SAMD1Q6SPF0 538 aaPredicted RBP19.53■□□□□ 0.72
PAX6-277ENST00000640735 YTHDC2Q9H6S0 1430 aaKnown RBP19.52■□□□□ 0.72
PAX6-277ENST00000640735 XRN1Q8IZH2 1706 aaKnown RBP19.52■□□□□ 0.72
PAX6-277ENST00000640735 NWD1Q149M9 1564 aa19.52■□□□□ 0.72
PAX6-277ENST00000640735 ANKRD26Q9UPS8 1709 aa19.52■□□□□ 0.71
PAX6-277ENST00000640735 AAMPQ13685 434 aa19.52■□□□□ 0.71
PAX6-277ENST00000640735 ZMYND15Q9H091 742 aa19.52■□□□□ 0.71
PAX6-277ENST00000640735 CABP2Q9NPB3 220 aa19.52■□□□□ 0.71
PAX6-277ENST00000640735 ATAD2Q6PL18 1390 aa19.51■□□□□ 0.71
PAX6-277ENST00000640735 PDIA4P13667 645 aaKnown RBP19.51■□□□□ 0.71
PAX6-277ENST00000640735 TNNT2P45379 298 aaPredicted RBP19.51■□□□□ 0.71
PAX6-277ENST00000640735 FAM161AQ3B820 660 aa19.51■□□□□ 0.71
PAX6-277ENST00000640735 STK26Q9P289 416 aa19.51■□□□□ 0.71
PAX6-277ENST00000640735 STRCP1A6NGW2 1772 aa19.51■□□□□ 0.71
PAX6-277ENST00000640735 A0A1W2PP64 1363 aa19.5■□□□□ 0.71
PAX6-277ENST00000640735 DDRGK1Q96HY6 314 aa19.5■□□□□ 0.71
PAX6-277ENST00000640735 AMOTL2Q9Y2J4 779 aa19.5■□□□□ 0.71
PAX6-277ENST00000640735 ZNF335Q9H4Z2 1342 aaPredicted RBP19.5■□□□□ 0.71
PAX6-277ENST00000640735 KNDC1Q76NI1 1749 aa19.5■□□□□ 0.71
PAX6-277ENST00000640735 KCNA6P17658 529 aa19.5■□□□□ 0.71
PAX6-277ENST00000640735 RSPH6AQ9H0K4 717 aa19.5■□□□□ 0.71
PAX6-277ENST00000640735 RARSP54136 660 aaKnown RBP19.49■□□□□ 0.71
PAX6-277ENST00000640735 COL3A1P02461 1466 aaPredicted RBP19.49■□□□□ 0.71
PAX6-277ENST00000640735 C8orf34Q49A92 452 aa19.48■□□□□ 0.71
PAX6-277ENST00000640735 CD163L1Q9NR16 1453 aa19.48■□□□□ 0.71
PAX6-277ENST00000640735 ECM2O94769 699 aaPredicted RBP19.47■□□□□ 0.71
PAX6-277ENST00000640735 TECPR2O15040 1411 aa19.47■□□□□ 0.71
PAX6-277ENST00000640735 RRP7AQ9Y3A4 280 aaKnown RBP19.47■□□□□ 0.71
PAX6-277ENST00000640735 CPS1P31327 1500 aa19.47■□□□□ 0.71
PAX6-277ENST00000640735 CLUAP1Q96AJ1 413 aa19.46■□□□□ 0.71
PAX6-277ENST00000640735 IGHDP01880 384 aa19.45■□□□□ 0.7
PAX6-277ENST00000640735 MYH16Q9H6N6 1097 aa19.45■□□□□ 0.7
PAX6-277ENST00000640735 PTCH1Q13635 1447 aa19.45■□□□□ 0.7
PAX6-277ENST00000640735 DLC1Q96QB1 1528 aa19.44■□□□□ 0.7
PAX6-277ENST00000640735 C1orf115Q9H7X2 142 aa19.44■□□□□ 0.7
PAX6-277ENST00000640735 TERF2IPQ9NYB0 399 aa19.44■□□□□ 0.7
PAX6-277ENST00000640735 ROBO2Q9HCK4 1378 aa19.44■□□□□ 0.7
PAX6-277ENST00000640735 CT47B1P0C2W7 299 aaPredicted RBP19.44■□□□□ 0.7
PAX6-277ENST00000640735 DEKP35659 375 aaKnown RBP19.43■□□□□ 0.7
PAX6-277ENST00000640735 SRPK2P78362 688 aaKnown RBP19.43■□□□□ 0.7
PAX6-277ENST00000640735 NEUROD2Q15784 382 aa19.43■□□□□ 0.7
PAX6-277ENST00000640735 PANK1Q8TE04 598 aa19.43■□□□□ 0.7
PAX6-277ENST00000640735 PLEKHF1Q96S99 279 aa19.43■□□□□ 0.7
PAX6-277ENST00000640735 U2AF1L5P0DN76 240 aaPredicted RBP19.42■□□□□ 0.7
PAX6-277ENST00000640735 U2AF1Q01081 240 aaKnown RBP eCLIP19.42■□□□□ 0.7
PAX6-277ENST00000640735 PRAM1Q96QH2 718 aa19.42■□□□□ 0.7
PAX6-277ENST00000640735 LTBP4Q8N2S1 1624 aa19.42■□□□□ 0.7
PAX6-277ENST00000640735 FYB1O15117 783 aa19.42■□□□□ 0.7
PAX6-277ENST00000640735 VIRMAQ69YN4 1812 aaKnown RBP19.42■□□□□ 0.7
PAX6-277ENST00000640735 PNPLA6Q8IY17 1366 aa19.41■□□□□ 0.7
PAX6-277ENST00000640735 SLC4A2P04920 1241 aa19.41■□□□□ 0.7
PAX6-277ENST00000640735 COG6Q9Y2V7 657 aa19.41■□□□□ 0.7
PAX6-277ENST00000640735 SAFB2Q14151 953 aaKnown RBP eCLIP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms