RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 NFE2L2Q16236 605 aa21.44■■□□□ 1.02
SCARB2-223ENST00000640640 PLCH2O75038 1416 aa21.43■■□□□ 1.02
SCARB2-223ENST00000640640 C14orf93Q9H972 538 aaKnown RBP21.43■■□□□ 1.02
SCARB2-223ENST00000640640 RNF20Q5VTR2 975 aa21.43■■□□□ 1.02
SCARB2-223ENST00000640640 CCDC34Q96HJ3 373 aa21.43■■□□□ 1.02
SCARB2-223ENST00000640640 TCOF1Q13428 1488 aaKnown RBP21.42■■□□□ 1.02
SCARB2-223ENST00000640640 ANKLE2Q86XL3 938 aa21.42■■□□□ 1.02
SCARB2-223ENST00000640640 CLASRPQ8N2M8 674 aaKnown RBP21.42■■□□□ 1.02
SCARB2-223ENST00000640640 CHMP4CQ96CF2 233 aa21.42■■□□□ 1.02
SCARB2-223ENST00000640640 TMX4Q9H1E5 349 aaPredicted RBP21.42■■□□□ 1.02
SCARB2-223ENST00000640640 NUCB2P80303 420 aa21.41■■□□□ 1.02
SCARB2-223ENST00000640640 POGZQ7Z3K3 1410 aa21.41■■□□□ 1.02
SCARB2-223ENST00000640640 GNAI2P04899 355 aa21.41■■□□□ 1.02
SCARB2-223ENST00000640640 DENND4BO75064 1496 aaPredicted RBP21.4■■□□□ 1.02
SCARB2-223ENST00000640640 ADAMTS12P58397 1594 aa21.4■■□□□ 1.02
SCARB2-223ENST00000640640 C20orf194Q5TEA3 1177 aa21.4■■□□□ 1.02
SCARB2-223ENST00000640640 THUMPD2Q9BTF0 503 aaKnown RBP21.39■■□□□ 1.01
SCARB2-223ENST00000640640 KIAA0556O60303 1618 aa21.39■■□□□ 1.01
SCARB2-223ENST00000640640 ITSN2Q9NZM3 1697 aa21.38■■□□□ 1.01
SCARB2-223ENST00000640640 TPM4P67936 248 aa21.38■■□□□ 1.01
SCARB2-223ENST00000640640 ZNF530Q6P9A1 599 aaPredicted RBP21.38■■□□□ 1.01
SCARB2-223ENST00000640640 RARSP54136 660 aaKnown RBP21.38■■□□□ 1.01
SCARB2-223ENST00000640640 WDR62O43379 1518 aa21.38■■□□□ 1.01
SCARB2-223ENST00000640640 KDM5BQ9UGL1 1544 aa21.38■■□□□ 1.01
SCARB2-223ENST00000640640 CFAP43Q8NDM7 1665 aa21.37■■□□□ 1.01
SCARB2-223ENST00000640640 CCT4P50991 539 aaKnown RBP21.37■■□□□ 1.01
SCARB2-223ENST00000640640 RALGAPBQ86X10 1494 aa21.37■■□□□ 1.01
SCARB2-223ENST00000640640 NME9Q86XW9 330 aa21.36■■□□□ 1.01
SCARB2-223ENST00000640640 SYCP2Q9BX26 1530 aa21.36■■□□□ 1.01
SCARB2-223ENST00000640640 DUSP27Q5VZP5 1158 aa21.36■■□□□ 1.01
SCARB2-223ENST00000640640 NEUROD6Q96NK8 337 aa21.36■■□□□ 1.01
SCARB2-223ENST00000640640 CPLX2Q6PUV4 134 aaKnown RBP21.36■■□□□ 1.01
SCARB2-223ENST00000640640 TMEM57Q8N5G2 664 aa21.35■■□□□ 1.01
SCARB2-223ENST00000640640 MCTP1Q6DN14 999 aa21.35■■□□□ 1.01
SCARB2-223ENST00000640640 SSH1Q8WYL5 1049 aa21.35■■□□□ 1.01
SCARB2-223ENST00000640640 SMC3Q9UQE7 1217 aa21.34■■□□□ 1.01
SCARB2-223ENST00000640640 WASLO00401 505 aaPredicted RBP21.33■■□□□ 1.01
SCARB2-223ENST00000640640 APPP05067 770 aa21.33■■□□□ 1.01
SCARB2-223ENST00000640640 CNTROBQ8N137 903 aa21.33■■□□□ 1.01
SCARB2-223ENST00000640640 NKTRP30414 1462 aaKnown RBP21.33■■□□□ 1.01
SCARB2-223ENST00000640640 TATP17735 454 aaPredicted RBP21.33■■□□□ 1.01
SCARB2-223ENST00000640640 CHD1LQ86WJ1 897 aa21.33■■□□□ 1.01
SCARB2-223ENST00000640640 EMILIN1Q9Y6C2 1016 aa21.33■■□□□ 1.01
SCARB2-223ENST00000640640 DUOX2Q9NRD8 1548 aa21.33■■□□□ 1.01
SCARB2-223ENST00000640640 VPS37CA5D8V6 355 aaPredicted RBP21.33■■□□□ 1
SCARB2-223ENST00000640640 SRCIN1Q9C0H9 1055 aa21.32■■□□□ 1
SCARB2-223ENST00000640640 ABCC11Q96J66 1382 aa21.32■■□□□ 1
SCARB2-223ENST00000640640 PRAG1Q86YV5 1406 aa21.32■■□□□ 1
SCARB2-223ENST00000640640 G3V3G9 751 aa21.31■■□□□ 1
SCARB2-223ENST00000640640 DCAF8Q5TAQ9 597 aa21.31■■□□□ 1
SCARB2-223ENST00000640640 NEK4P51957 841 aa21.31■■□□□ 1
SCARB2-223ENST00000640640 RASSF8Q8NHQ8 419 aa21.31■■□□□ 1
SCARB2-223ENST00000640640 CPLX1O14810 134 aa21.3■■□□□ 1
SCARB2-223ENST00000640640 SYNE3Q6ZMZ3 975 aa21.3■■□□□ 1
SCARB2-223ENST00000640640 DCTN1Q14203 1278 aa21.3■■□□□ 1
SCARB2-223ENST00000640640 TRAPPC8Q9Y2L5 1435 aa21.3■■□□□ 1
SCARB2-223ENST00000640640 TRDNQ13061 729 aa21.3■■□□□ 1
SCARB2-223ENST00000640640 AMER1Q5JTC6 1135 aaPredicted RBP21.3■■□□□ 1
SCARB2-223ENST00000640640 FSD1Q9BTV5 496 aa21.29■■□□□ 1
SCARB2-223ENST00000640640 RABEP1Q15276 862 aa21.29■■□□□ 1
SCARB2-223ENST00000640640 ASXL2Q76L83 1435 aa21.29■■□□□ 1
SCARB2-223ENST00000640640 MCM10Q7L590 875 aa21.28■■□□□ 1
SCARB2-223ENST00000640640 LRRCC1Q9C099 1032 aa21.28■■□□□ 1
SCARB2-223ENST00000640640 PPP6R1Q9UPN7 881 aa21.28■■□□□ 1
SCARB2-223ENST00000640640 AKAP17AQ02040 695 aaKnown RBP21.28■■□□□ 1
SCARB2-223ENST00000640640 RPAP2Q8IXW5 612 aaPredicted RBP21.28■■□□□ 1
SCARB2-223ENST00000640640 SKAP1Q86WV1 359 aa21.27■■□□□ 1
SCARB2-223ENST00000640640 NSD2O96028 1365 aa21.27■■□□□ 1
SCARB2-223ENST00000640640 NUP160Q12769 1436 aa21.27■■□□□ 1
SCARB2-223ENST00000640640 XPCQ01831 940 aaPredicted RBP21.27■■□□□ 1
SCARB2-223ENST00000640640 TESK2Q96S53 571 aa21.27■□□□□ 0.99
SCARB2-223ENST00000640640 IFT57Q9NWB7 429 aa21.27■□□□□ 0.99
SCARB2-223ENST00000640640 AMOTL2Q9Y2J4 779 aa21.27■□□□□ 0.99
SCARB2-223ENST00000640640 LRPPRCP42704 1394 aaKnown RBP21.26■□□□□ 0.99
SCARB2-223ENST00000640640 CEBPAP49715 358 aaPredicted RBP21.26■□□□□ 0.99
SCARB2-223ENST00000640640 ALDH1L2Q3SY69 923 aa21.26■□□□□ 0.99
SCARB2-223ENST00000640640 MIS18AQ9NYP9 233 aa21.26■□□□□ 0.99
SCARB2-223ENST00000640640 BECN2A8MW95 431 aa21.26■□□□□ 0.99
SCARB2-223ENST00000640640 GOLGA6L19H0YKK7 550 aa21.25■□□□□ 0.99
SCARB2-223ENST00000640640 GNAT3A8MTJ3 354 aa21.25■□□□□ 0.99
SCARB2-223ENST00000640640 ERC1Q8IUD2 1116 aa21.25■□□□□ 0.99
SCARB2-223ENST00000640640 STRN4Q9NRL3 753 aa21.25■□□□□ 0.99
SCARB2-223ENST00000640640 A2MP01023 1474 aa21.24■□□□□ 0.99
SCARB2-223ENST00000640640 WASHC4Q2M389 1173 aa21.24■□□□□ 0.99
SCARB2-223ENST00000640640 VPS37DQ86XT2 251 aa21.24■□□□□ 0.99
SCARB2-223ENST00000640640 DISP1Q96F81 1524 aa21.24■□□□□ 0.99
SCARB2-223ENST00000640640 BICD2Q8TD16 824 aa21.24■□□□□ 0.99
SCARB2-223ENST00000640640 MCM2P49736 904 aa21.23■□□□□ 0.99
SCARB2-223ENST00000640640 KIF21AQ7Z4S6 1674 aa21.23■□□□□ 0.99
SCARB2-223ENST00000640640 KCNH5Q8NCM2 988 aa21.23■□□□□ 0.99
SCARB2-223ENST00000640640 TRAK2O60296 914 aa21.22■□□□□ 0.99
SCARB2-223ENST00000640640 ZC3H6P61129 1189 aaKnown RBP21.22■□□□□ 0.99
SCARB2-223ENST00000640640 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.22■□□□□ 0.99
SCARB2-223ENST00000640640 SPG7Q9UQ90 795 aa21.22■□□□□ 0.99
SCARB2-223ENST00000640640 PARD3Q8TEW0 1356 aa21.22■□□□□ 0.99
SCARB2-223ENST00000640640 SRGAP3O43295 1099 aa21.22■□□□□ 0.99
SCARB2-223ENST00000640640 TRIM29Q14134 588 aa21.22■□□□□ 0.99
SCARB2-223ENST00000640640 TOM1L2Q6ZVM7 507 aa21.22■□□□□ 0.99
SCARB2-223ENST00000640640 RALYLQ86SE5 291 aaKnown RBP21.21■□□□□ 0.99
SCARB2-223ENST00000640640 SHANK2Q9UPX8 1470 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms