RNA–Protein interactions for RNA: ENST00000640545.1

GFAP-236, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-236ENST00000640545 ITSN1Q15811 1721 aa21.04■□□□□ 0.96
GFAP-236ENST00000640545 A0A0G2JS52 829 aa21.03■□□□□ 0.96
GFAP-236ENST00000640545 MYT1Q01538 1121 aa21.03■□□□□ 0.96
GFAP-236ENST00000640545 PRDM11Q9NQV5 511 aa21.03■□□□□ 0.96
GFAP-236ENST00000640545 SEPT12Q8IYM1 358 aa21.02■□□□□ 0.96
GFAP-236ENST00000640545 TRPM3Q9HCF6 1732 aaPredicted RBP21.01■□□□□ 0.95
GFAP-236ENST00000640545 POLR3AO14802 1390 aaPredicted RBP21.01■□□□□ 0.95
GFAP-236ENST00000640545 ROCK2O75116 1388 aaKnown RBP21■□□□□ 0.95
GFAP-236ENST00000640545 ABTB2Q8N961 1025 aa21■□□□□ 0.95
GFAP-236ENST00000640545 CABP2Q9NPB3 220 aa21■□□□□ 0.95
GFAP-236ENST00000640545 NWD2Q9ULI1 1742 aa20.99■□□□□ 0.95
GFAP-236ENST00000640545 ONECUT3O60422 494 aaPredicted RBP20.99■□□□□ 0.95
GFAP-236ENST00000640545 EVC2Q86UK5 1308 aa20.99■□□□□ 0.95
GFAP-236ENST00000640545 ALS2Q96Q42 1657 aa20.99■□□□□ 0.95
GFAP-236ENST00000640545 SF3B2Q13435 895 aaKnown RBP20.98■□□□□ 0.95
GFAP-236ENST00000640545 NUTM2GQ5VZR2 741 aa20.98■□□□□ 0.95
GFAP-236ENST00000640545 GLI3P10071 1580 aa20.97■□□□□ 0.95
GFAP-236ENST00000640545 PPIP5K1Q6PFW1 1433 aa20.97■□□□□ 0.95
GFAP-236ENST00000640545 ABCA3Q99758 1704 aa20.96■□□□□ 0.95
GFAP-236ENST00000640545 KRT27Q7Z3Y8 459 aa20.96■□□□□ 0.95
GFAP-236ENST00000640545 NLRP13Q86W25 1043 aa20.96■□□□□ 0.95
GFAP-236ENST00000640545 PLCH1Q4KWH8 1693 aa20.96■□□□□ 0.95
GFAP-236ENST00000640545 ZC3H6P61129 1189 aaKnown RBP20.95■□□□□ 0.94
GFAP-236ENST00000640545 FAM98CQ17RN3 349 aaKnown RBP20.95■□□□□ 0.94
GFAP-236ENST00000640545 CABP1Q9NZU7 370 aa20.95■□□□□ 0.94
GFAP-236ENST00000640545 BRD4O60885 1362 aaPredicted RBP20.95■□□□□ 0.94
GFAP-236ENST00000640545 COL14A1Q05707 1796 aaKnown RBP20.95■□□□□ 0.94
GFAP-236ENST00000640545 KIAA0232Q92628 1395 aa20.94■□□□□ 0.94
GFAP-236ENST00000640545 EVA1CP58658 441 aa20.93■□□□□ 0.94
GFAP-236ENST00000640545 TRIM26Q12899 539 aaPredicted RBP20.93■□□□□ 0.94
GFAP-236ENST00000640545 CHRNA2Q15822 529 aa20.92■□□□□ 0.94
GFAP-236ENST00000640545 STRN4Q9NRL3 753 aa20.92■□□□□ 0.94
GFAP-236ENST00000640545 ZRANB1Q9UGI0 708 aa20.92■□□□□ 0.94
GFAP-236ENST00000640545 BLMP54132 1417 aaPredicted RBP20.91■□□□□ 0.94
GFAP-236ENST00000640545 SPATA31A5Q5VU36 1347 aa20.91■□□□□ 0.94
GFAP-236ENST00000640545 SPATA31A7Q8IWB4 1347 aa20.91■□□□□ 0.94
GFAP-236ENST00000640545 TONSLQ96HA7 1378 aa20.91■□□□□ 0.94
GFAP-236ENST00000640545 TOPAZ1Q8N9V7 1692 aa20.9■□□□□ 0.94
GFAP-236ENST00000640545 ZNF692Q9BU19 519 aaPredicted RBP20.9■□□□□ 0.94
GFAP-236ENST00000640545 QRICH2Q9H0J4 1663 aa20.89■□□□□ 0.94
GFAP-236ENST00000640545 EP400Q96L91 3159 aa20.89■□□□□ 0.94
GFAP-236ENST00000640545 CARD11Q9BXL7 1154 aa20.89■□□□□ 0.93
GFAP-236ENST00000640545 TRPM1Q7Z4N2 1603 aa20.89■□□□□ 0.93
GFAP-236ENST00000640545 GCP02774 474 aa20.88■□□□□ 0.93
GFAP-236ENST00000640545 NLRP6P59044 892 aa20.88■□□□□ 0.93
GFAP-236ENST00000640545 USP19O94966 1318 aa20.86■□□□□ 0.93
GFAP-236ENST00000640545 SPATA31A1Q5TZJ5 1347 aa20.85■□□□□ 0.93
GFAP-236ENST00000640545 USP6P35125 1406 aa20.85■□□□□ 0.93
GFAP-236ENST00000640545 CPDO75976 1380 aa20.85■□□□□ 0.93
GFAP-236ENST00000640545 NRAPQ86VF7 1730 aa20.84■□□□□ 0.93
GFAP-236ENST00000640545 USP35Q9P2H5 1018 aa20.84■□□□□ 0.93
GFAP-236ENST00000640545 CRYBG1Q9Y4K1 1723 aa20.84■□□□□ 0.93
GFAP-236ENST00000640545 BAG6P46379 1132 aa20.83■□□□□ 0.93
GFAP-236ENST00000640545 PHRF1Q9P1Y6 1649 aaKnown RBP20.82■□□□□ 0.92
GFAP-236ENST00000640545 ZBTB7CA1YPR0 619 aa20.82■□□□□ 0.92
GFAP-236ENST00000640545 BRWD3Q6RI45 1802 aa20.81■□□□□ 0.92
GFAP-236ENST00000640545 DEFB132Q7Z7B7 95 aa20.81■□□□□ 0.92
GFAP-236ENST00000640545 SSH2Q76I76 1423 aa20.79■□□□□ 0.92
GFAP-236ENST00000640545 PDE3BQ13370 1112 aa20.79■□□□□ 0.92
GFAP-236ENST00000640545 LARP1Q6PKG0 1096 aaKnown RBP20.79■□□□□ 0.92
GFAP-236ENST00000640545 BARGINQ6ZT62 677 aa20.79■□□□□ 0.92
GFAP-236ENST00000640545 TCP11L2Q8N4U5 519 aa20.79■□□□□ 0.92
GFAP-236ENST00000640545 KCNH5Q8NCM2 988 aa20.79■□□□□ 0.92
GFAP-236ENST00000640545 THRAP3Q9Y2W1 955 aaKnown RBP20.79■□□□□ 0.92
GFAP-236ENST00000640545 SBNO2Q9Y2G9 1366 aa20.79■□□□□ 0.92
GFAP-236ENST00000640545 TTC21BQ7Z4L5 1316 aa20.78■□□□□ 0.92
GFAP-236ENST00000640545 TTC21AQ8NDW8 1320 aa20.78■□□□□ 0.92
GFAP-236ENST00000640545 SLC24A1O60721 1099 aa20.78■□□□□ 0.92
GFAP-236ENST00000640545 FAM196AQ6ZSG2 479 aa20.78■□□□□ 0.92
GFAP-236ENST00000640545 NRKQ7Z2Y5 1582 aa20.77■□□□□ 0.92
GFAP-236ENST00000640545 KTN1Q86UP2 1357 aaKnown RBP20.77■□□□□ 0.92
GFAP-236ENST00000640545 TMC1Q8TDI8 760 aa20.77■□□□□ 0.92
GFAP-236ENST00000640545 FAM182BQ5T319 152 aa20.76■□□□□ 0.91
GFAP-236ENST00000640545 AATKQ6ZMQ8 1374 aa20.75■□□□□ 0.91
GFAP-236ENST00000640545 CAMTA1Q9Y6Y1 1673 aa20.75■□□□□ 0.91
GFAP-236ENST00000640545 HDGFL2Q7Z4V5 671 aaPredicted RBP20.75■□□□□ 0.91
GFAP-236ENST00000640545 CPSF1Q10570 1443 aaKnown RBP20.72■□□□□ 0.91
GFAP-236ENST00000640545 SOX12O15370 315 aa20.72■□□□□ 0.91
GFAP-236ENST00000640545 TOM1L2Q6ZVM7 507 aa20.72■□□□□ 0.91
GFAP-236ENST00000640545 PUS7Q96PZ0 661 aaKnown RBP20.72■□□□□ 0.91
GFAP-236ENST00000640545 TERF2IPQ9NYB0 399 aa20.72■□□□□ 0.91
GFAP-236ENST00000640545 THSD7AQ9UPZ6 1657 aa20.71■□□□□ 0.91
GFAP-236ENST00000640545 C11orf95C9JLR9 678 aaPredicted RBP20.71■□□□□ 0.91
GFAP-236ENST00000640545 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.71■□□□□ 0.91
GFAP-236ENST00000640545 CRB1P82279 1406 aa20.7■□□□□ 0.9
GFAP-236ENST00000640545 COL5A2P05997 1499 aaPredicted RBP20.7■□□□□ 0.9
GFAP-236ENST00000640545 ARHGEF25Q86VW2 580 aa20.7■□□□□ 0.9
GFAP-236ENST00000640545 SLIT3O75094 1523 aa20.69■□□□□ 0.9
GFAP-236ENST00000640545 TRIM37O94972 964 aa20.69■□□□□ 0.9
GFAP-236ENST00000640545 CSB-PGBD3P0DP91 1061 aa20.69■□□□□ 0.9
GFAP-236ENST00000640545 EN1Q05925 392 aaPredicted RBP20.69■□□□□ 0.9
GFAP-236ENST00000640545 LMO7Q8WWI1 1683 aa20.68■□□□□ 0.9
GFAP-236ENST00000640545 SLC12A5Q9H2X9 1139 aa20.68■□□□□ 0.9
GFAP-236ENST00000640545 ST20-MTHFSA0A0A6YYL1 179 aa20.67■□□□□ 0.9
GFAP-236ENST00000640545 APBA3O96018 575 aa20.66■□□□□ 0.9
GFAP-236ENST00000640545 CDCA7Q9BWT1 371 aaPredicted RBP20.66■□□□□ 0.9
GFAP-236ENST00000640545 WDR17Q8IZU2 1322 aa20.66■□□□□ 0.9
GFAP-236ENST00000640545 PIK3C2AO00443 1686 aa20.66■□□□□ 0.9
GFAP-236ENST00000640545 DDB1Q16531 1140 aa20.65■□□□□ 0.9
GFAP-236ENST00000640545 AXIN2Q9Y2T1 843 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms