RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 BAP1Q92560 729 aa11.35□□□□□ -0.59
RTTN-217ENST00000640393 FKBPLQ9UIM3 349 aa11.33□□□□□ -0.6
RTTN-217ENST00000640393 A0A0G2JS52 829 aa11.32□□□□□ -0.6
RTTN-217ENST00000640393 LIAT1Q6ZQX7 453 aa11.31□□□□□ -0.6
RTTN-217ENST00000640393 PNMA1Q8ND90 353 aa11.31□□□□□ -0.6
RTTN-217ENST00000640393 AGERQ15109 404 aa11.3□□□□□ -0.6
RTTN-217ENST00000640393 ERICH6Q7L0X2 663 aa11.3□□□□□ -0.6
RTTN-217ENST00000640393 ARMC2Q8NEN0 867 aa11.3□□□□□ -0.6
RTTN-217ENST00000640393 SLC19A1P41440 591 aa11.29□□□□□ -0.6
RTTN-217ENST00000640393 CD2BP2O95400 341 aaKnown RBP11.28□□□□□ -0.6
RTTN-217ENST00000640393 EMID1Q96A84 441 aaPredicted RBP11.28□□□□□ -0.6
RTTN-217ENST00000640393 SOCS7O14512 581 aa11.28□□□□□ -0.6
RTTN-217ENST00000640393 TRIM32Q13049 653 aa11.28□□□□□ -0.6
RTTN-217ENST00000640393 PROSER2Q86WR7 435 aaPredicted RBP11.28□□□□□ -0.6
RTTN-217ENST00000640393 SUPT5HO00267 1087 aaKnown RBP11.27□□□□□ -0.61
RTTN-217ENST00000640393 VAC14Q08AM6 782 aa11.27□□□□□ -0.61
RTTN-217ENST00000640393 IRF5Q13568 498 aa11.27□□□□□ -0.61
RTTN-217ENST00000640393 FOXJ1Q92949 421 aa11.27□□□□□ -0.61
RTTN-217ENST00000640393 CARD14Q9BXL6 1004 aa11.27□□□□□ -0.61
RTTN-217ENST00000640393 PRKD2Q9BZL6 878 aa11.27□□□□□ -0.61
RTTN-217ENST00000640393 ZNF330Q9Y3S2 320 aaPredicted RBP11.27□□□□□ -0.61
RTTN-217ENST00000640393 MAGEB6P1A0A0J9YX57 407 aa11.26□□□□□ -0.61
RTTN-217ENST00000640393 A6NJR5 290 aa11.26□□□□□ -0.61
RTTN-217ENST00000640393 SH3BP2P78314 561 aa11.26□□□□□ -0.61
RTTN-217ENST00000640393 NBPF14Q5TI25 921 aa11.26□□□□□ -0.61
RTTN-217ENST00000640393 WWC1Q8IX03 1113 aa11.26□□□□□ -0.61
RTTN-217ENST00000640393 ZNF777Q9ULD5 760 aaPredicted RBP11.26□□□□□ -0.61
RTTN-217ENST00000640393 GPR37L1O60883 481 aa11.25□□□□□ -0.61
RTTN-217ENST00000640393 ZNF511Q8NB15 262 aa11.25□□□□□ -0.61
RTTN-217ENST00000640393 RPIAP49247 311 aa11.24□□□□□ -0.61
RTTN-217ENST00000640393 TRAK2O60296 914 aa11.23□□□□□ -0.61
RTTN-217ENST00000640393 SKOR1P84550 965 aa11.23□□□□□ -0.61
RTTN-217ENST00000640393 PTK2Q05397 1052 aa11.23□□□□□ -0.61
RTTN-217ENST00000640393 PDXDC2PQ6P474 469 aa11.23□□□□□ -0.61
RTTN-217ENST00000640393 ARHGAP9Q9BRR9 750 aa11.23□□□□□ -0.61
RTTN-217ENST00000640393 FBXO45P0C2W1 286 aa11.22□□□□□ -0.61
RTTN-217ENST00000640393 ZBTB33Q86T24 672 aa11.22□□□□□ -0.61
RTTN-217ENST00000640393 ARID3CA6NKF2 412 aa11.21□□□□□ -0.61
RTTN-217ENST00000640393 ZBBXA8MT70 800 aa11.21□□□□□ -0.61
RTTN-217ENST00000640393 POM121CA8CG34 1229 aa11.2□□□□□ -0.62
RTTN-217ENST00000640393 FOXC1Q12948 553 aa11.2□□□□□ -0.62
RTTN-217ENST00000640393 SPRYD7Q5W111 196 aa11.2□□□□□ -0.62
RTTN-217ENST00000640393 FNBP4Q8N3X1 1017 aaPredicted RBP11.2□□□□□ -0.62
RTTN-217ENST00000640393 GPKOWQ92917 476 aaPredicted RBP eCLIP11.2□□□□□ -0.62
RTTN-217ENST00000640393 ZC3H4Q9UPT8 1303 aaKnown RBP11.2□□□□□ -0.62
RTTN-217ENST00000640393 WASHC4Q2M389 1173 aa11.19□□□□□ -0.62
RTTN-217ENST00000640393 RC3H1Q5TC82 1133 aaKnown RBP11.19□□□□□ -0.62
RTTN-217ENST00000640393 BPHLQ86WA6 291 aaPredicted RBP11.19□□□□□ -0.62
RTTN-217ENST00000640393 NR1H3Q13133 447 aa11.18□□□□□ -0.62
RTTN-217ENST00000640393 C4orf48Q5BLP8 95 aa11.18□□□□□ -0.62
RTTN-217ENST00000640393 ZNF697Q5TEC3 545 aa11.18□□□□□ -0.62
RTTN-217ENST00000640393 EHBP1Q8NDI1 1231 aa11.18□□□□□ -0.62
RTTN-217ENST00000640393 ADAM32Q8TC27 787 aa11.18□□□□□ -0.62
RTTN-217ENST00000640393 OCSTAMPQ9BR26 566 aa11.18□□□□□ -0.62
RTTN-217ENST00000640393 SH3BP5LQ7L8J4 393 aa11.17□□□□□ -0.62
RTTN-217ENST00000640393 PCDHB9Q9Y5E1 797 aa11.17□□□□□ -0.62
RTTN-217ENST00000640393 WNT7BP56706 349 aa11.16□□□□□ -0.62
RTTN-217ENST00000640393 ARID5BQ14865 1188 aa11.16□□□□□ -0.62
RTTN-217ENST00000640393 ZNF598Q86UK7 904 aaKnown RBP11.16□□□□□ -0.62
RTTN-217ENST00000640393 HDGFL1Q5TGJ6 251 aa11.15□□□□□ -0.63
RTTN-217ENST00000640393 SH3RF1Q7Z6J0 888 aa11.15□□□□□ -0.63
RTTN-217ENST00000640393 DZIP3Q86Y13 1208 aaKnown RBP11.15□□□□□ -0.63
RTTN-217ENST00000640393 GPSM3Q9Y4H4 160 aa11.15□□□□□ -0.63
RTTN-217ENST00000640393 V9GY48 417 aaPredicted RBP11.15□□□□□ -0.63
RTTN-217ENST00000640393 EIF4G2P78344 907 aaKnown RBP eCLIP11.14□□□□□ -0.63
RTTN-217ENST00000640393 SEMA3FQ13275 785 aa11.14□□□□□ -0.63
RTTN-217ENST00000640393 ERFEQ4G0M1 354 aa11.13□□□□□ -0.63
RTTN-217ENST00000640393 MRGPRX2Q96LB1 330 aa11.13□□□□□ -0.63
RTTN-217ENST00000640393 TNFRSF10AO00220 468 aa11.12□□□□□ -0.63
RTTN-217ENST00000640393 VARSP26640 1264 aaKnown RBP11.12□□□□□ -0.63
RTTN-217ENST00000640393 FAM174AQ8TBP5 190 aa11.11□□□□□ -0.63
RTTN-217ENST00000640393 CALR3Q96L12 384 aaKnown RBP11.11□□□□□ -0.63
RTTN-217ENST00000640393 WNT7AO00755 349 aa11.09□□□□□ -0.63
RTTN-217ENST00000640393 RAB15P59190 212 aa11.09□□□□□ -0.63
RTTN-217ENST00000640393 GLMNQ92990 594 aa11.09□□□□□ -0.63
RTTN-217ENST00000640393 SLC10A4Q96EP9 437 aa11.09□□□□□ -0.63
RTTN-217ENST00000640393 ADAMTS19Q8TE59 1207 aa11.08□□□□□ -0.64
RTTN-217ENST00000640393 PKD2L1Q9P0L9 805 aa11.08□□□□□ -0.64
RTTN-217ENST00000640393 TLL2Q9Y6L7 1015 aa11.08□□□□□ -0.64
RTTN-217ENST00000640393 VASH1Q7L8A9 365 aaPredicted RBP11.07□□□□□ -0.64
RTTN-217ENST00000640393 ARID3AQ99856 593 aa11.07□□□□□ -0.64
RTTN-217ENST00000640393 ALDH1A1P00352 501 aa11.06□□□□□ -0.64
RTTN-217ENST00000640393 ALG2Q9H553 416 aa11.06□□□□□ -0.64
RTTN-217ENST00000640393 TTC24A2A3L6 582 aaPredicted RBP11.05□□□□□ -0.64
RTTN-217ENST00000640393 C1orf115Q9H7X2 142 aa11.05□□□□□ -0.64
RTTN-217ENST00000640393 SIAH2O43255 324 aa11.04□□□□□ -0.64
RTTN-217ENST00000640393 GIGYF1O75420 1035 aaPredicted RBP11.04□□□□□ -0.64
RTTN-217ENST00000640393 CYP4X1Q8N118 509 aa11.04□□□□□ -0.64
RTTN-217ENST00000640393 C1QTNF2Q9BXJ5 285 aa11.04□□□□□ -0.64
RTTN-217ENST00000640393 CEP126Q9P2H0 1117 aa11.04□□□□□ -0.64
RTTN-217ENST00000640393 GDF9O60383 454 aa11.03□□□□□ -0.64
RTTN-217ENST00000640393 SOX11P35716 441 aa11.03□□□□□ -0.64
RTTN-217ENST00000640393 KCTD15Q96SI1 283 aaPredicted RBP11.03□□□□□ -0.64
RTTN-217ENST00000640393 SLFNL1Q499Z3 407 aa11.02□□□□□ -0.65
RTTN-217ENST00000640393 TRIM67Q6ZTA4 783 aa11.02□□□□□ -0.65
RTTN-217ENST00000640393 TRMT44Q8IYL2 757 aaKnown RBP11.02□□□□□ -0.65
RTTN-217ENST00000640393 SNIP1Q8TAD8 396 aaKnown RBP11.02□□□□□ -0.65
RTTN-217ENST00000640393 PDZRN3Q9UPQ7 1066 aa11.02□□□□□ -0.65
RTTN-217ENST00000640393 J3QL48 77 aa11.01□□□□□ -0.65
RTTN-217ENST00000640393 MCCD1P59942 119 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms