RNA–Protein interactions for RNA: ENST00000640317.1

GABRD-214, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 5

Gene GABRD, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-214ENST00000640317 ZRANB1Q9UGI0 708 aa29.47■■■□□ 2.31
GABRD-214ENST00000640317 NRKQ7Z2Y5 1582 aa29.46■■■□□ 2.31
GABRD-214ENST00000640317 ESCO1Q5FWF5 840 aa29.46■■■□□ 2.31
GABRD-214ENST00000640317 HNRNPUQ00839 825 aaKnown RBP eCLIP29.45■■■□□ 2.31
GABRD-214ENST00000640317 ATF3P18847 181 aa29.44■■■□□ 2.3
GABRD-214ENST00000640317 LRRC7Q96NW7 1537 aa29.43■■■□□ 2.3
GABRD-214ENST00000640317 MTHFSP49914 203 aa29.43■■■□□ 2.3
GABRD-214ENST00000640317 DCCP43146 1447 aa29.43■■■□□ 2.3
GABRD-214ENST00000640317 TTC21AQ8NDW8 1320 aa29.42■■■□□ 2.3
GABRD-214ENST00000640317 COG3Q96JB2 828 aa29.42■■■□□ 2.3
GABRD-214ENST00000640317 ORAI2Q96SN7 254 aa29.42■■■□□ 2.3
GABRD-214ENST00000640317 C1orf167Q5SNV9 1468 aa29.41■■■□□ 2.3
GABRD-214ENST00000640317 SCAF1Q9H7N4 1312 aaKnown RBP29.4■■■□□ 2.3
GABRD-214ENST00000640317 MSH6P52701 1360 aa29.4■■■□□ 2.3
GABRD-214ENST00000640317 XIRP1Q702N8 1843 aaKnown RBP29.39■■■□□ 2.3
GABRD-214ENST00000640317 CADPS2Q86UW7 1296 aa29.39■■■□□ 2.29
GABRD-214ENST00000640317 MST1RQ04912 1400 aa29.37■■■□□ 2.29
GABRD-214ENST00000640317 WDR43Q15061 677 aaKnown RBP eCLIP29.37■■■□□ 2.29
GABRD-214ENST00000640317 CFAP53Q96M91 514 aa29.35■■■□□ 2.29
GABRD-214ENST00000640317 ADAMTS8Q9UP79 889 aa29.35■■■□□ 2.29
GABRD-214ENST00000640317 FBLN1P23142 703 aa29.35■■■□□ 2.29
GABRD-214ENST00000640317 INSRP06213 1382 aa29.34■■■□□ 2.29
GABRD-214ENST00000640317 PSME1Q06323 249 aa29.34■■■□□ 2.29
GABRD-214ENST00000640317 OVOS2A0A0J9YW53 1432 aa29.33■■■□□ 2.29
GABRD-214ENST00000640317 OVOS2Q6IE36 1432 aa29.33■■■□□ 2.29
GABRD-214ENST00000640317 POLKQ9UBT6 870 aa29.32■■■□□ 2.28
GABRD-214ENST00000640317 AATKQ6ZMQ8 1374 aa29.32■■■□□ 2.28
GABRD-214ENST00000640317 USP31Q70CQ4 1352 aa29.32■■■□□ 2.28
GABRD-214ENST00000640317 FOXO3O43524 673 aa29.3■■■□□ 2.28
GABRD-214ENST00000640317 PAK3O75914 559 aaPredicted RBP29.3■■■□□ 2.28
GABRD-214ENST00000640317 PIK3C2AO00443 1686 aa29.27■■■□□ 2.28
GABRD-214ENST00000640317 KIF1AQ12756 1690 aa29.27■■■□□ 2.28
GABRD-214ENST00000640317 BLMP54132 1417 aaPredicted RBP29.27■■■□□ 2.28
GABRD-214ENST00000640317 NLRP6P59044 892 aa29.26■■■□□ 2.28
GABRD-214ENST00000640317 ABTB2Q8N961 1025 aa29.26■■■□□ 2.28
GABRD-214ENST00000640317 PNPLA6Q8IY17 1366 aa29.26■■■□□ 2.27
GABRD-214ENST00000640317 ZBED9Q6R2W3 1325 aa29.26■■■□□ 2.27
GABRD-214ENST00000640317 MAP2P11137 1827 aaKnown RBP29.26■■■□□ 2.27
GABRD-214ENST00000640317 EMILIN1Q9Y6C2 1016 aa29.25■■■□□ 2.27
GABRD-214ENST00000640317 SHPRHQ149N8 1683 aa29.25■■■□□ 2.27
GABRD-214ENST00000640317 KRT28Q7Z3Y7 464 aa29.24■■■□□ 2.27
GABRD-214ENST00000640317 COL3A1P02461 1466 aaPredicted RBP29.24■■■□□ 2.27
GABRD-214ENST00000640317 PPM1GO15355 546 aaPredicted RBP29.23■■■□□ 2.27
GABRD-214ENST00000640317 RRS1Q15050 365 aaKnown RBP29.23■■■□□ 2.27
GABRD-214ENST00000640317 SMG6Q86US8 1419 aaKnown RBP29.23■■■□□ 2.27
GABRD-214ENST00000640317 XPCQ01831 940 aaPredicted RBP29.22■■■□□ 2.27
GABRD-214ENST00000640317 NUTM2GQ5VZR2 741 aa29.22■■■□□ 2.27
GABRD-214ENST00000640317 SENP3-EIF4A1A0A087X0R7 540 aa29.22■■■□□ 2.27
GABRD-214ENST00000640317 SLAIN2Q9P270 581 aa29.19■■■□□ 2.26
GABRD-214ENST00000640317 DIAPH1O60610 1272 aaKnown RBP29.18■■■□□ 2.26
GABRD-214ENST00000640317 NUDCQ9Y266 331 aa29.18■■■□□ 2.26
GABRD-214ENST00000640317 USP54Q70EL1 1684 aa29.18■■■□□ 2.26
GABRD-214ENST00000640317 SOX12O15370 315 aa29.17■■■□□ 2.26
GABRD-214ENST00000640317 BRINP3Q76B58 766 aa29.16■■■□□ 2.26
GABRD-214ENST00000640317 DDX17Q92841 729 aaKnown RBP29.16■■■□□ 2.26
GABRD-214ENST00000640317 CDK12Q9NYV4 1490 aaPredicted RBP29.16■■■□□ 2.26
GABRD-214ENST00000640317 MARF1Q9Y4F3 1742 aaKnown RBP29.16■■■□□ 2.26
GABRD-214ENST00000640317 CCDC146Q8IYE0 955 aa29.15■■■□□ 2.26
GABRD-214ENST00000640317 LTBP4Q8N2S1 1624 aa29.15■■■□□ 2.26
GABRD-214ENST00000640317 TRPM3Q9HCF6 1732 aaPredicted RBP29.15■■■□□ 2.26
GABRD-214ENST00000640317 NPHP3Q7Z494 1330 aa29.14■■■□□ 2.26
GABRD-214ENST00000640317 U2AF1L5P0DN76 240 aaPredicted RBP29.13■■■□□ 2.25
GABRD-214ENST00000640317 U2AF1Q01081 240 aaKnown RBP eCLIP29.13■■■□□ 2.25
GABRD-214ENST00000640317 U2SURPO15042 1029 aaKnown RBP29.12■■■□□ 2.25
GABRD-214ENST00000640317 SALL2Q9Y467 1007 aaPredicted RBP29.12■■■□□ 2.25
GABRD-214ENST00000640317 AEBP2Q6ZN18 517 aaPredicted RBP29.11■■■□□ 2.25
GABRD-214ENST00000640317 MAP3K19Q56UN5 1328 aa29.11■■■□□ 2.25
GABRD-214ENST00000640317 IL13P35225 146 aa29.09■■■□□ 2.25
GABRD-214ENST00000640317 LMOD2Q6P5Q4 547 aa29.09■■■□□ 2.25
GABRD-214ENST00000640317 SBNO1A3KN83 1393 aa29.09■■■□□ 2.25
GABRD-214ENST00000640317 RUNDC1Q96C34 613 aa29.08■■■□□ 2.25
GABRD-214ENST00000640317 PEAK1Q9H792 1746 aa29.07■■■□□ 2.24
GABRD-214ENST00000640317 APAF1O14727 1248 aa29.06■■■□□ 2.24
GABRD-214ENST00000640317 PXDNQ92626 1479 aa29.06■■■□□ 2.24
GABRD-214ENST00000640317 KCNH5Q8NCM2 988 aa29.05■■■□□ 2.24
GABRD-214ENST00000640317 HSP90AB2PQ58FF8 381 aa29.05■■■□□ 2.24
GABRD-214ENST00000640317 AMPHP49418 695 aa29.04■■■□□ 2.24
GABRD-214ENST00000640317 ALS2Q96Q42 1657 aa29.04■■■□□ 2.24
GABRD-214ENST00000640317 USP19O94966 1318 aa29.03■■■□□ 2.24
GABRD-214ENST00000640317 FLT4P35916 1363 aa29.03■■■□□ 2.24
GABRD-214ENST00000640317 EIF4A2Q14240 407 aaKnown RBP29.02■■■□□ 2.24
GABRD-214ENST00000640317 NFAT5O94916 1531 aa29.02■■■□□ 2.24
GABRD-214ENST00000640317 KIF24Q5T7B8 1368 aa29.01■■■□□ 2.23
GABRD-214ENST00000640317 SPATA31A3Q5VYP0 1347 aa29.01■■■□□ 2.23
GABRD-214ENST00000640317 SLIT3O75094 1523 aa29.01■■■□□ 2.23
GABRD-214ENST00000640317 GCP02774 474 aa29.01■■■□□ 2.23
GABRD-214ENST00000640317 PLEKHF1Q96S99 279 aa29.01■■■□□ 2.23
GABRD-214ENST00000640317 TNS3Q68CZ2 1445 aa29■■■□□ 2.23
GABRD-214ENST00000640317 FCHSD2O94868 740 aa29■■■□□ 2.23
GABRD-214ENST00000640317 SOS2Q07890 1332 aaPredicted RBP28.99■■■□□ 2.23
GABRD-214ENST00000640317 HOXC9P31274 260 aa28.99■■■□□ 2.23
GABRD-214ENST00000640317 PLEKHG5O94827 1062 aa28.98■■■□□ 2.23
GABRD-214ENST00000640317 TCP11L2Q8N4U5 519 aa28.98■■■□□ 2.23
GABRD-214ENST00000640317 NGEFQ8N5V2 710 aa28.98■■■□□ 2.23
GABRD-214ENST00000640317 PNNQ9H307 717 aaKnown RBP28.98■■■□□ 2.23
GABRD-214ENST00000640317 PDE3BQ13370 1112 aa28.97■■■□□ 2.23
GABRD-214ENST00000640317 RSPH6AQ9H0K4 717 aa28.96■■■□□ 2.23
GABRD-214ENST00000640317 IQSEC2Q5JU85 1478 aa28.95■■■□□ 2.22
GABRD-214ENST00000640317 HMOX1P09601 288 aa28.95■■■□□ 2.22
GABRD-214ENST00000640317 ZNF521Q96K83 1311 aa28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms