RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 PDILTQ8N807 584 aa17.67■□□□□ 0.42
HNRNPU-226ENST00000640218 EPS15P42566 896 aa17.67■□□□□ 0.42
HNRNPU-226ENST00000640218 NAT10Q9H0A0 1025 aaKnown RBP17.67■□□□□ 0.42
HNRNPU-226ENST00000640218 SART3Q15020 963 aaKnown RBP17.67■□□□□ 0.42
HNRNPU-226ENST00000640218 NFKBIBQ15653 356 aa17.66■□□□□ 0.42
HNRNPU-226ENST00000640218 NOB1Q9ULX3 412 aaKnown RBP17.66■□□□□ 0.42
HNRNPU-226ENST00000640218 ATP2B1P20020 1258 aa17.66■□□□□ 0.42
HNRNPU-226ENST00000640218 ZNF428Q96B54 188 aa17.65■□□□□ 0.42
HNRNPU-226ENST00000640218 CASKIN1Q8WXD9 1431 aa17.65■□□□□ 0.42
HNRNPU-226ENST00000640218 RRP12Q5JTH9 1297 aaKnown RBP17.65■□□□□ 0.42
HNRNPU-226ENST00000640218 PDZRN3Q9UPQ7 1066 aa17.65■□□□□ 0.42
HNRNPU-226ENST00000640218 NEK4P51957 841 aa17.65■□□□□ 0.42
HNRNPU-226ENST00000640218 RNF214Q8ND24 703 aa17.65■□□□□ 0.42
HNRNPU-226ENST00000640218 MNS1Q8NEH6 495 aa17.65■□□□□ 0.42
HNRNPU-226ENST00000640218 SMG6Q86US8 1419 aaKnown RBP17.65■□□□□ 0.42
HNRNPU-226ENST00000640218 NBPF1Q3BBV0 1214 aa17.65■□□□□ 0.42
HNRNPU-226ENST00000640218 TSR2Q969E8 191 aaKnown RBP17.65■□□□□ 0.42
HNRNPU-226ENST00000640218 GNAI2P04899 355 aa17.64■□□□□ 0.42
HNRNPU-226ENST00000640218 ODF2Q5BJF6 829 aa17.64■□□□□ 0.42
HNRNPU-226ENST00000640218 TEX35Q5T0J7 233 aa17.64■□□□□ 0.42
HNRNPU-226ENST00000640218 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.64■□□□□ 0.41
HNRNPU-226ENST00000640218 FAM43AQ8N2R8 423 aa17.64■□□□□ 0.41
HNRNPU-226ENST00000640218 OFD1O75665 1012 aa17.63■□□□□ 0.41
HNRNPU-226ENST00000640218 RUFY1Q96T51 708 aa17.63■□□□□ 0.41
HNRNPU-226ENST00000640218 CNNM1Q9NRU3 951 aa17.63■□□□□ 0.41
HNRNPU-226ENST00000640218 SLC4A2P04920 1241 aa17.63■□□□□ 0.41
HNRNPU-226ENST00000640218 TTC39AQ5SRH9 613 aa17.63■□□□□ 0.41
HNRNPU-226ENST00000640218 CDK19Q9BWU1 502 aa17.63■□□□□ 0.41
HNRNPU-226ENST00000640218 SLC12A5Q9H2X9 1139 aa17.63■□□□□ 0.41
HNRNPU-226ENST00000640218 SULT6B1Q6IMI4 303 aa17.63■□□□□ 0.41
HNRNPU-226ENST00000640218 R3HCC1Q9Y3T6 440 aaKnown RBP17.63■□□□□ 0.41
HNRNPU-226ENST00000640218 TATP17735 454 aaPredicted RBP17.62■□□□□ 0.41
HNRNPU-226ENST00000640218 HIP1O00291 1037 aa17.62■□□□□ 0.41
HNRNPU-226ENST00000640218 MYCNP04198 464 aaPredicted RBP17.62■□□□□ 0.41
HNRNPU-226ENST00000640218 NASPP49321 788 aaPredicted RBP17.62■□□□□ 0.41
HNRNPU-226ENST00000640218 HDGFL1Q5TGJ6 251 aa17.61■□□□□ 0.41
HNRNPU-226ENST00000640218 ERC1Q8IUD2 1116 aa17.61■□□□□ 0.41
HNRNPU-226ENST00000640218 ZFYVE27Q5T4F4 411 aa17.61■□□□□ 0.41
HNRNPU-226ENST00000640218 TTLL5Q6EMB2 1281 aa17.61■□□□□ 0.41
HNRNPU-226ENST00000640218 CAVIN1Q6NZI2 390 aaKnown RBP17.61■□□□□ 0.41
HNRNPU-226ENST00000640218 CCDC158Q5M9N0 1113 aa17.6■□□□□ 0.41
HNRNPU-226ENST00000640218 CABP1Q9NZU7 370 aa17.6■□□□□ 0.41
HNRNPU-226ENST00000640218 SYNJ2O15056 1496 aa17.6■□□□□ 0.41
HNRNPU-226ENST00000640218 BCAR3O75815 825 aa17.6■□□□□ 0.41
HNRNPU-226ENST00000640218 SLC3A2P08195 630 aaKnown RBP17.6■□□□□ 0.41
HNRNPU-226ENST00000640218 GCC1Q96CN9 775 aa17.6■□□□□ 0.41
HNRNPU-226ENST00000640218 SIL1Q9H173 461 aa17.6■□□□□ 0.41
HNRNPU-226ENST00000640218 CABP4P57796 275 aa17.6■□□□□ 0.41
HNRNPU-226ENST00000640218 AK7Q96M32 723 aa17.59■□□□□ 0.41
HNRNPU-226ENST00000640218 CEBPZQ03701 1054 aaKnown RBP17.59■□□□□ 0.41
HNRNPU-226ENST00000640218 KINO60870 393 aaKnown RBP17.59■□□□□ 0.41
HNRNPU-226ENST00000640218 ARGLU1Q9NWB6 273 aaPredicted RBP17.59■□□□□ 0.41
HNRNPU-226ENST00000640218 STK11IPQ8N1F8 1099 aa17.59■□□□□ 0.41
HNRNPU-226ENST00000640218 CCDC39Q9UFE4 941 aa17.59■□□□□ 0.41
HNRNPU-226ENST00000640218 CFTRP13569 1480 aa17.59■□□□□ 0.41
HNRNPU-226ENST00000640218 VSIG10Q8N0Z9 540 aa17.59■□□□□ 0.41
HNRNPU-226ENST00000640218 TRAK2O60296 914 aa17.58■□□□□ 0.41
HNRNPU-226ENST00000640218 DDX54Q8TDD1 881 aaKnown RBP17.58■□□□□ 0.41
HNRNPU-226ENST00000640218 TRIM5Q9C035 493 aa17.58■□□□□ 0.41
HNRNPU-226ENST00000640218 WDR70Q9NW82 654 aa17.58■□□□□ 0.41
HNRNPU-226ENST00000640218 PRPF40AO75400 957 aaKnown RBP17.58■□□□□ 0.4
HNRNPU-226ENST00000640218 ADAMTS2O95450 1211 aa17.58■□□□□ 0.4
HNRNPU-226ENST00000640218 FMNL2Q96PY5 1086 aa17.58■□□□□ 0.4
HNRNPU-226ENST00000640218 CDK5RAP3Q96JB5 506 aa17.58■□□□□ 0.4
HNRNPU-226ENST00000640218 SMC2O95347 1197 aa17.58■□□□□ 0.4
HNRNPU-226ENST00000640218 MAP4K4O95819 1239 aaPredicted RBP17.58■□□□□ 0.4
HNRNPU-226ENST00000640218 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.58■□□□□ 0.46e-7■■■■■ 33
HNRNPU-226ENST00000640218 MRE11P49959 708 aa17.57■□□□□ 0.4
HNRNPU-226ENST00000640218 LETM1O95202 739 aaPredicted RBP17.57■□□□□ 0.4
HNRNPU-226ENST00000640218 CAGE1Q8TC20 777 aa17.57■□□□□ 0.4
HNRNPU-226ENST00000640218 MYL6BP14649 208 aa17.57■□□□□ 0.4
HNRNPU-226ENST00000640218 MCM2P49736 904 aa17.57■□□□□ 0.4
HNRNPU-226ENST00000640218 PDCP20941 246 aa17.57■□□□□ 0.4
HNRNPU-226ENST00000640218 HSP90AB2PQ58FF8 381 aa17.57■□□□□ 0.4
HNRNPU-226ENST00000640218 TOM1L2Q6ZVM7 507 aa17.57■□□□□ 0.4
HNRNPU-226ENST00000640218 SCAPERQ9BY12 1400 aa17.57■□□□□ 0.4
HNRNPU-226ENST00000640218 RABEP1Q15276 862 aa17.56■□□□□ 0.4
HNRNPU-226ENST00000640218 FIBPO43427 364 aa17.56■□□□□ 0.4
HNRNPU-226ENST00000640218 PRG4Q92954 1404 aaPredicted RBP17.56■□□□□ 0.4
HNRNPU-226ENST00000640218 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
HNRNPU-226ENST00000640218 STK3Q13188 491 aa17.56■□□□□ 0.4
HNRNPU-226ENST00000640218 PDE3AQ14432 1141 aa17.56■□□□□ 0.4
HNRNPU-226ENST00000640218 ACBD3Q9H3P7 528 aa17.56■□□□□ 0.4
HNRNPU-226ENST00000640218 CCT4P50991 539 aaKnown RBP17.56■□□□□ 0.4
HNRNPU-226ENST00000640218 ATP2B2Q01814 1243 aa17.56■□□□□ 0.4
HNRNPU-226ENST00000640218 LRRCC1Q9C099 1032 aa17.56■□□□□ 0.4
HNRNPU-226ENST00000640218 GNL3LQ9NVN8 582 aaKnown RBP17.56■□□□□ 0.4
HNRNPU-226ENST00000640218 CDR1P51861 262 aa17.55■□□□□ 0.4
HNRNPU-226ENST00000640218 BRPF1P55201 1214 aaPredicted RBP17.55■□□□□ 0.4
HNRNPU-226ENST00000640218 ZNF530Q6P9A1 599 aaPredicted RBP17.55■□□□□ 0.4
HNRNPU-226ENST00000640218 ZNF692Q9BU19 519 aaPredicted RBP17.55■□□□□ 0.4
HNRNPU-226ENST00000640218 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.55■□□□□ 0.42e-12■□□□□ 10.8
HNRNPU-226ENST00000640218 ZNF396Q96N95 335 aaPredicted RBP17.55■□□□□ 0.4
HNRNPU-226ENST00000640218 TXLNAP40222 546 aa17.55■□□□□ 0.4
HNRNPU-226ENST00000640218 TMEM132AQ24JP5 1023 aa17.55■□□□□ 0.4
HNRNPU-226ENST00000640218 STK38Q15208 465 aa17.54■□□□□ 0.4
HNRNPU-226ENST00000640218 TSPY26PQ9H489 355 aa17.54■□□□□ 0.4
HNRNPU-226ENST00000640218 C9orf84Q5VXU9 1444 aa17.54■□□□□ 0.4
HNRNPU-226ENST00000640218 MBD3O95983 291 aa17.54■□□□□ 0.4
HNRNPU-226ENST00000640218 CCDC173Q0VFZ6 552 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms