RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 TMCO4Q5TGY1 634 aa11.08□□□□□ -0.64
SCARB2-220ENST00000640076 SLC26A8Q96RN1 970 aa11.08□□□□□ -0.64
SCARB2-220ENST00000640076 EIF3AQ14152 1382 aaKnown RBP11.07□□□□□ -0.64
SCARB2-220ENST00000640076 HSPA2P54652 639 aa11.07□□□□□ -0.64
SCARB2-220ENST00000640076 CLUAP1Q96AJ1 413 aa11.07□□□□□ -0.64
SCARB2-220ENST00000640076 TRAK1Q9UPV9 953 aa11.07□□□□□ -0.64
SCARB2-220ENST00000640076 TBX22Q9Y458 520 aa11.07□□□□□ -0.64
SCARB2-220ENST00000640076 ARHGEF28Q8N1W1 1705 aaKnown RBP11.07□□□□□ -0.64
SCARB2-220ENST00000640076 NCKAP5LQ9HCH0 1330 aa11.06□□□□□ -0.64
SCARB2-220ENST00000640076 LRPPRCP42704 1394 aaKnown RBP11.06□□□□□ -0.64
SCARB2-220ENST00000640076 NPHP4O75161 1426 aaPredicted RBP11.06□□□□□ -0.64
SCARB2-220ENST00000640076 HMGB1P09429 215 aaKnown RBP11.05□□□□□ -0.64
SCARB2-220ENST00000640076 GPIHBP1Q8IV16 184 aa11.05□□□□□ -0.64
SCARB2-220ENST00000640076 TESK2Q96S53 571 aa11.05□□□□□ -0.64
SCARB2-220ENST00000640076 STK26Q9P289 416 aa11.05□□□□□ -0.64
SCARB2-220ENST00000640076 ABCC11Q96J66 1382 aa11.05□□□□□ -0.64
SCARB2-220ENST00000640076 ABCB7O75027 752 aa11.05□□□□□ -0.64
SCARB2-220ENST00000640076 DLC1Q96QB1 1528 aa11.04□□□□□ -0.64
SCARB2-220ENST00000640076 KNDC1Q76NI1 1749 aa11.04□□□□□ -0.64
SCARB2-220ENST00000640076 PLEKHG3A1L390 1219 aa11.04□□□□□ -0.64
SCARB2-220ENST00000640076 C11orf95C9JLR9 678 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-220ENST00000640076 CENPJQ9HC77 1338 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-220ENST00000640076 TECPR2O15040 1411 aa11.04□□□□□ -0.64
SCARB2-220ENST00000640076 MFAP1P55081 439 aaKnown RBP11.03□□□□□ -0.64
SCARB2-220ENST00000640076 PIK3R4Q99570 1358 aa11.03□□□□□ -0.64
SCARB2-220ENST00000640076 PTPRUQ92729 1446 aa11.03□□□□□ -0.64
SCARB2-220ENST00000640076 QRICH2Q9H0J4 1663 aa11.03□□□□□ -0.64
SCARB2-220ENST00000640076 SBNO2Q9Y2G9 1366 aa11.03□□□□□ -0.64
SCARB2-220ENST00000640076 WASHC2AQ641Q2 1341 aa11.03□□□□□ -0.64
SCARB2-220ENST00000640076 STRCQ7RTU9 1775 aa11.02□□□□□ -0.64
SCARB2-220ENST00000640076 CPS1P31327 1500 aa11.02□□□□□ -0.65
SCARB2-220ENST00000640076 RBM25P49756 843 aaKnown RBP11.02□□□□□ -0.65
SCARB2-220ENST00000640076 RBM26Q5T8P6 1007 aaKnown RBP11.02□□□□□ -0.65
SCARB2-220ENST00000640076 CCDC7Q96M83 1385 aa11.01□□□□□ -0.65
SCARB2-220ENST00000640076 DDRGK1Q96HY6 314 aa11.01□□□□□ -0.65
SCARB2-220ENST00000640076 XRN1Q8IZH2 1706 aaKnown RBP11.01□□□□□ -0.65
SCARB2-220ENST00000640076 FAM135BQ49AJ0 1406 aa11.01□□□□□ -0.65
SCARB2-220ENST00000640076 KIF7Q2M1P5 1343 aa11.01□□□□□ -0.65
SCARB2-220ENST00000640076 FOXD4L5Q5VV16 416 aaPredicted RBP11.01□□□□□ -0.65
SCARB2-220ENST00000640076 FOXD4L4Q8WXT5 416 aaPredicted RBP11.01□□□□□ -0.65
SCARB2-220ENST00000640076 ZNF428Q96B54 188 aa11.01□□□□□ -0.65
SCARB2-220ENST00000640076 SIRT1Q96EB6 747 aa11.01□□□□□ -0.65
SCARB2-220ENST00000640076 PRAM1Q96QH2 718 aa11.01□□□□□ -0.65
SCARB2-220ENST00000640076 ARIH1Q9Y4X5 557 aaPredicted RBP11.01□□□□□ -0.65
SCARB2-220ENST00000640076 CHD2O14647 1828 aaKnown RBP11□□□□□ -0.65
SCARB2-220ENST00000640076 DISP3Q9P2K9 1392 aa11□□□□□ -0.65
SCARB2-220ENST00000640076 TMF1P82094 1093 aa11□□□□□ -0.65
SCARB2-220ENST00000640076 AMOTL2Q9Y2J4 779 aa11□□□□□ -0.65
SCARB2-220ENST00000640076 ROBO2Q9HCK4 1378 aa11□□□□□ -0.65
SCARB2-220ENST00000640076 GZF1Q9H116 711 aaPredicted RBP10.99□□□□□ -0.65
SCARB2-220ENST00000640076 POGKQ9P215 609 aa10.99□□□□□ -0.65
SCARB2-220ENST00000640076 PTCH1Q13635 1447 aa10.99□□□□□ -0.65
SCARB2-220ENST00000640076 PLEKHH1Q9ULM0 1364 aa10.99□□□□□ -0.65
SCARB2-220ENST00000640076 SAFB2Q14151 953 aaKnown RBP eCLIP10.99□□□□□ -0.65
SCARB2-220ENST00000640076 WAPLQ7Z5K2 1190 aa10.99□□□□□ -0.65
SCARB2-220ENST00000640076 HSP90B1P14625 803 aaKnown RBP10.97□□□□□ -0.65
SCARB2-220ENST00000640076 KCNA6P17658 529 aa10.97□□□□□ -0.65
SCARB2-220ENST00000640076 MFRPQ9BY79 579 aa10.97□□□□□ -0.65
SCARB2-220ENST00000640076 SERPINA10Q9UK55 444 aa10.97□□□□□ -0.65
SCARB2-220ENST00000640076 MINK1Q8N4C8 1332 aaPredicted RBP10.96□□□□□ -0.65
SCARB2-220ENST00000640076 NWD1Q149M9 1564 aa10.96□□□□□ -0.65
SCARB2-220ENST00000640076 TULP4Q9NRJ4 1543 aa10.96□□□□□ -0.65
SCARB2-220ENST00000640076 PYGBP11216 843 aa10.96□□□□□ -0.65
SCARB2-220ENST00000640076 DDX10Q13206 875 aaKnown RBP10.96□□□□□ -0.65
SCARB2-220ENST00000640076 CDK11BP21127 795 aaKnown RBP10.96□□□□□ -0.66
SCARB2-220ENST00000640076 CDCA8Q53HL2 280 aa10.96□□□□□ -0.66
SCARB2-220ENST00000640076 EVC2Q86UK5 1308 aa10.95□□□□□ -0.66
SCARB2-220ENST00000640076 POLR3GLQ9BT43 218 aa10.95□□□□□ -0.66
SCARB2-220ENST00000640076 GOPCQ9HD26 462 aa10.95□□□□□ -0.66
SCARB2-220ENST00000640076 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.95□□□□□ -0.66
SCARB2-220ENST00000640076 DIEXFQ68CQ4 756 aaKnown RBP10.94□□□□□ -0.66
SCARB2-220ENST00000640076 ADGRB2O60241 1585 aa10.93□□□□□ -0.66
SCARB2-220ENST00000640076 NKTRP30414 1462 aaKnown RBP10.93□□□□□ -0.66
SCARB2-220ENST00000640076 STRCP1A6NGW2 1772 aa10.93□□□□□ -0.66
SCARB2-220ENST00000640076 CCDC97Q96F63 343 aaPredicted RBP10.93□□□□□ -0.66
SCARB2-220ENST00000640076 RASEFQ8IZ41 740 aa10.92□□□□□ -0.66
SCARB2-220ENST00000640076 RETREG2Q8NC44 543 aa10.92□□□□□ -0.66
SCARB2-220ENST00000640076 PUS7Q96PZ0 661 aaKnown RBP10.92□□□□□ -0.66
SCARB2-220ENST00000640076 E9PSI1 815 aa10.92□□□□□ -0.66
SCARB2-220ENST00000640076 PPP1R37O75864 691 aa10.92□□□□□ -0.66
SCARB2-220ENST00000640076 MYOM1P52179 1685 aa10.91□□□□□ -0.66
SCARB2-220ENST00000640076 WASLO00401 505 aaPredicted RBP10.91□□□□□ -0.66
SCARB2-220ENST00000640076 CDK19Q9BWU1 502 aa10.91□□□□□ -0.66
SCARB2-220ENST00000640076 SRPK2P78362 688 aaKnown RBP10.9□□□□□ -0.66
SCARB2-220ENST00000640076 CABP2Q9NPB3 220 aa10.9□□□□□ -0.66
SCARB2-220ENST00000640076 NALCNQ8IZF0 1738 aa10.9□□□□□ -0.66
SCARB2-220ENST00000640076 MLLT3P42568 568 aaPredicted RBP10.9□□□□□ -0.66
SCARB2-220ENST00000640076 PROSER2Q86WR7 435 aaPredicted RBP10.9□□□□□ -0.66
SCARB2-220ENST00000640076 IRF5Q13568 498 aa10.89□□□□□ -0.67
SCARB2-220ENST00000640076 RBM33Q96EV2 1170 aaKnown RBP10.89□□□□□ -0.67
SCARB2-220ENST00000640076 ATAD2Q6PL18 1390 aa10.89□□□□□ -0.67
SCARB2-220ENST00000640076 ADGRL3Q9HAR2 1447 aa10.89□□□□□ -0.67
SCARB2-220ENST00000640076 CACNB1Q02641 598 aaPredicted RBP10.88□□□□□ -0.67
SCARB2-220ENST00000640076 MCM6Q14566 821 aa10.88□□□□□ -0.67
SCARB2-220ENST00000640076 ZNF335Q9H4Z2 1342 aaPredicted RBP10.88□□□□□ -0.67
SCARB2-220ENST00000640076 FNBP4Q8N3X1 1017 aaPredicted RBP10.88□□□□□ -0.67
SCARB2-220ENST00000640076 CDC42BPGQ6DT37 1551 aa10.88□□□□□ -0.67
SCARB2-220ENST00000640076 NINLQ9Y2I6 1382 aa10.87□□□□□ -0.67
SCARB2-220ENST00000640076 ATP7BP35670 1465 aa10.86□□□□□ -0.67
SCARB2-220ENST00000640076 MNX1P50219 401 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms