RNA–Protein interactions for RNA: ENST00000640038.1

PAX6-263, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-263ENST00000640038 SLIT2O94813 1529 aa12.97□□□□□ -0.33
PAX6-263ENST00000640038 VPS72Q15906 364 aa12.96□□□□□ -0.33
PAX6-263ENST00000640038 RGPD1P0DJD0 1748 aa12.96□□□□□ -0.34
PAX6-263ENST00000640038 ONECUT3O60422 494 aaPredicted RBP12.95□□□□□ -0.34
PAX6-263ENST00000640038 BRPF3Q9ULD4 1205 aa12.95□□□□□ -0.34
PAX6-263ENST00000640038 PTPN23Q9H3S7 1636 aa12.95□□□□□ -0.34
PAX6-263ENST00000640038 RRP9O43818 475 aaKnown RBP12.94□□□□□ -0.34
PAX6-263ENST00000640038 C1QTNF8P60827 252 aa12.94□□□□□ -0.34
PAX6-263ENST00000640038 FAM98CQ17RN3 349 aaKnown RBP12.94□□□□□ -0.34
PAX6-263ENST00000640038 NUTM2FA1L443 756 aa12.93□□□□□ -0.34
PAX6-263ENST00000640038 PODXL2Q9NZ53 605 aa12.93□□□□□ -0.34
PAX6-263ENST00000640038 E9PCH4 1651 aa12.92□□□□□ -0.34
PAX6-263ENST00000640038 CAMTA1Q9Y6Y1 1673 aa12.92□□□□□ -0.34
PAX6-263ENST00000640038 PXDNQ92626 1479 aa12.91□□□□□ -0.34
PAX6-263ENST00000640038 CABLES1Q8TDN4 633 aa12.91□□□□□ -0.34
PAX6-263ENST00000640038 SPON1Q9HCB6 807 aa12.91□□□□□ -0.34
PAX6-263ENST00000640038 ZMYND15Q9H091 742 aa12.9□□□□□ -0.34
PAX6-263ENST00000640038 LRPPRCP42704 1394 aaKnown RBP12.9□□□□□ -0.34
PAX6-263ENST00000640038 TONSLQ96HA7 1378 aa12.9□□□□□ -0.34
PAX6-263ENST00000640038 USP32Q8NFA0 1604 aa12.89□□□□□ -0.35
PAX6-263ENST00000640038 TRIM37O94972 964 aa12.89□□□□□ -0.35
PAX6-263ENST00000640038 APBA3O96018 575 aa12.89□□□□□ -0.35
PAX6-263ENST00000640038 NBPF8Q3BBV2 869 aa12.89□□□□□ -0.35
PAX6-263ENST00000640038 NBPF14Q5TI25 921 aa12.89□□□□□ -0.35
PAX6-263ENST00000640038 CAMKK2Q96RR4 588 aa12.89□□□□□ -0.35
PAX6-263ENST00000640038 ROBO2Q9HCK4 1378 aa12.89□□□□□ -0.35
PAX6-263ENST00000640038 PLCH1Q4KWH8 1693 aa12.89□□□□□ -0.35
PAX6-263ENST00000640038 ANKRD50Q9ULJ7 1429 aa12.88□□□□□ -0.35
PAX6-263ENST00000640038 LMOD2Q6P5Q4 547 aa12.88□□□□□ -0.35
PAX6-263ENST00000640038 NUDCQ9Y266 331 aa12.88□□□□□ -0.35
PAX6-263ENST00000640038 TNS1Q9HBL0 1735 aaKnown RBP12.88□□□□□ -0.35
PAX6-263ENST00000640038 ADGRL2O95490 1459 aa12.87□□□□□ -0.35
PAX6-263ENST00000640038 NINLQ9Y2I6 1382 aa12.87□□□□□ -0.35
PAX6-263ENST00000640038 KCNQ2O43526 872 aa12.87□□□□□ -0.35
PAX6-263ENST00000640038 NWD2Q9ULI1 1742 aa12.87□□□□□ -0.35
PAX6-263ENST00000640038 SPATA31A3Q5VYP0 1347 aa12.87□□□□□ -0.35
PAX6-263ENST00000640038 BACH2Q9BYV9 841 aa12.86□□□□□ -0.35
PAX6-263ENST00000640038 CHD4Q14839 1912 aa12.86□□□□□ -0.35
PAX6-263ENST00000640038 IQGAP3Q86VI3 1631 aa12.85□□□□□ -0.35
PAX6-263ENST00000640038 FAM83GA6ND36 823 aa12.85□□□□□ -0.35
PAX6-263ENST00000640038 KRT28Q7Z3Y7 464 aa12.85□□□□□ -0.35
PAX6-263ENST00000640038 SIN3AQ96ST3 1273 aa12.84□□□□□ -0.35
PAX6-263ENST00000640038 DISP2A7MBM2 1401 aa12.84□□□□□ -0.35
PAX6-263ENST00000640038 CENPJQ9HC77 1338 aaPredicted RBP12.84□□□□□ -0.35
PAX6-263ENST00000640038 NFKBIBQ15653 356 aa12.83□□□□□ -0.36
PAX6-263ENST00000640038 FRAT1Q92837 279 aaPredicted RBP12.83□□□□□ -0.36
PAX6-263ENST00000640038 BTG4Q9NY30 223 aa12.83□□□□□ -0.36
PAX6-263ENST00000640038 LAS1LQ9Y4W2 734 aaKnown RBP12.83□□□□□ -0.36
PAX6-263ENST00000640038 PDE4AP27815 886 aa12.82□□□□□ -0.36
PAX6-263ENST00000640038 FAM50AQ14320 339 aaKnown RBP12.82□□□□□ -0.36
PAX6-263ENST00000640038 VSIG10Q8N0Z9 540 aa12.82□□□□□ -0.36
PAX6-263ENST00000640038 CEP350Q5VT06 3117 aa12.82□□□□□ -0.36
PAX6-263ENST00000640038 ADGRB2O60241 1585 aa12.81□□□□□ -0.36
PAX6-263ENST00000640038 UTRNP46939 3433 aa12.81□□□□□ -0.36
PAX6-263ENST00000640038 L1TD1Q5T7N2 865 aaKnown RBP12.81□□□□□ -0.36
PAX6-263ENST00000640038 PRKRIP1Q9H875 184 aaPredicted RBP12.81□□□□□ -0.36
PAX6-263ENST00000640038 HFM1A2PYH4 1435 aa12.8□□□□□ -0.36
PAX6-263ENST00000640038 PPP4R3CPQ6ZMV5 832 aa12.8□□□□□ -0.36
PAX6-263ENST00000640038 FAM196AQ6ZSG2 479 aa12.8□□□□□ -0.36
PAX6-263ENST00000640038 PARD3Q8TEW0 1356 aa12.8□□□□□ -0.36
PAX6-263ENST00000640038 NUP188Q5SRE5 1749 aa12.79□□□□□ -0.36
PAX6-263ENST00000640038 GIGYF1O75420 1035 aaPredicted RBP12.79□□□□□ -0.36
PAX6-263ENST00000640038 PSME1Q06323 249 aa12.79□□□□□ -0.36
PAX6-263ENST00000640038 HSP90AA2PQ14568 343 aaPredicted RBP12.79□□□□□ -0.36
PAX6-263ENST00000640038 NUP155O75694 1391 aa12.79□□□□□ -0.36
PAX6-263ENST00000640038 CCDC144AA2RUR9 1427 aa12.79□□□□□ -0.36
PAX6-263ENST00000640038 NAIPQ13075 1403 aa12.78□□□□□ -0.36
PAX6-263ENST00000640038 NEXMIFQ5QGS0 1516 aa12.78□□□□□ -0.36
PAX6-263ENST00000640038 CDC42BPGQ6DT37 1551 aa12.77□□□□□ -0.36
PAX6-263ENST00000640038 RREB1Q92766 1687 aa12.77□□□□□ -0.36
PAX6-263ENST00000640038 HSP90AA1P07900 732 aaKnown RBP12.77□□□□□ -0.37
PAX6-263ENST00000640038 WAPLQ7Z5K2 1190 aa12.77□□□□□ -0.37
PAX6-263ENST00000640038 STK26Q9P289 416 aa12.77□□□□□ -0.37
PAX6-263ENST00000640038 TNS3Q68CZ2 1445 aa12.77□□□□□ -0.37
PAX6-263ENST00000640038 NRAPQ86VF7 1730 aa12.76□□□□□ -0.37
PAX6-263ENST00000640038 VGFO15240 615 aaPredicted RBP12.76□□□□□ -0.37
PAX6-263ENST00000640038 MRS2Q9HD23 443 aa12.76□□□□□ -0.37
PAX6-263ENST00000640038 SPATA31A5Q5VU36 1347 aa12.76□□□□□ -0.37
PAX6-263ENST00000640038 SPATA31A7Q8IWB4 1347 aa12.76□□□□□ -0.37
PAX6-263ENST00000640038 CCDC7Q96M83 1385 aa12.76□□□□□ -0.37
PAX6-263ENST00000640038 RGPD8O14715 1765 aaPredicted RBP12.76□□□□□ -0.37
PAX6-263ENST00000640038 KIF1BO60333 1816 aa12.75□□□□□ -0.37
PAX6-263ENST00000640038 ABCA3Q99758 1704 aa12.75□□□□□ -0.37
PAX6-263ENST00000640038 KIF1AQ12756 1690 aa12.74□□□□□ -0.37
PAX6-263ENST00000640038 NRKQ7Z2Y5 1582 aa12.74□□□□□ -0.37
PAX6-263ENST00000640038 ZBTB7AO95365 584 aa12.74□□□□□ -0.37
PAX6-263ENST00000640038 CLCN1P35523 988 aa12.74□□□□□ -0.37
PAX6-263ENST00000640038 PDE3BQ13370 1112 aa12.74□□□□□ -0.37
PAX6-263ENST00000640038 PHF8Q9UPP1 1060 aa12.74□□□□□ -0.37
PAX6-263ENST00000640038 ATF5Q9Y2D1 282 aaPredicted RBP12.74□□□□□ -0.37
PAX6-263ENST00000640038 CALD1Q05682 793 aaKnown RBP12.72□□□□□ -0.37
PAX6-263ENST00000640038 THSD7AQ9UPZ6 1657 aa12.72□□□□□ -0.37
PAX6-263ENST00000640038 ARHGEF10O15013 1369 aa12.71□□□□□ -0.37
PAX6-263ENST00000640038 EIF4G2P78344 907 aaKnown RBP eCLIP12.71□□□□□ -0.37
PAX6-263ENST00000640038 SYT17Q9BSW7 474 aa12.71□□□□□ -0.37
PAX6-263ENST00000640038 FHDC1Q9C0D6 1143 aaPredicted RBP12.71□□□□□ -0.37
PAX6-263ENST00000640038 PDGFDQ9GZP0 370 aaPredicted RBP12.71□□□□□ -0.37
PAX6-263ENST00000640038 STRN4Q9NRL3 753 aa12.71□□□□□ -0.37
PAX6-263ENST00000640038 COL14A1Q05707 1796 aaKnown RBP12.71□□□□□ -0.38
PAX6-263ENST00000640038 MYOM1P52179 1685 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms