RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 USP17L8P0C7I0 530 aa10.41□□□□□ -0.74
NECAP1-220ENST00000639841 ZMIZ1Q9ULJ6 1067 aa10.41□□□□□ -0.74
NECAP1-220ENST00000639841 EFCAB5A4FU69 1503 aa10.41□□□□□ -0.74
NECAP1-220ENST00000639841 ZMYM4Q5VZL5 1548 aa10.41□□□□□ -0.74
NECAP1-220ENST00000639841 SOWAHDA6NJG2 315 aa10.4□□□□□ -0.74
NECAP1-220ENST00000639841 AP1G2O75843 785 aa10.4□□□□□ -0.74
NECAP1-220ENST00000639841 TMEM164Q5U3C3 297 aa10.4□□□□□ -0.74
NECAP1-220ENST00000639841 DPH6Q7L8W6 267 aa10.4□□□□□ -0.74
NECAP1-220ENST00000639841 NDUFB9Q9Y6M9 179 aa10.4□□□□□ -0.74
NECAP1-220ENST00000639841 AKNAQ7Z591 1439 aa10.4□□□□□ -0.75
NECAP1-220ENST00000639841 TAGLNQ01995 201 aaKnown RBP10.39□□□□□ -0.75
NECAP1-220ENST00000639841 QPCTQ16769 361 aa10.39□□□□□ -0.75
NECAP1-220ENST00000639841 FAM161AQ3B820 660 aa10.39□□□□□ -0.75
NECAP1-220ENST00000639841 FHOD3Q2V2M9 1422 aa10.39□□□□□ -0.75
NECAP1-220ENST00000639841 DENND4BO75064 1496 aaPredicted RBP10.39□□□□□ -0.75
NECAP1-220ENST00000639841 TUSC1Q2TAM9 212 aa10.39□□□□□ -0.75
NECAP1-220ENST00000639841 TAF7LQ5H9L4 462 aa10.39□□□□□ -0.75
NECAP1-220ENST00000639841 STK32AQ8WU08 396 aa10.39□□□□□ -0.75
NECAP1-220ENST00000639841 MADDQ8WXG6 1647 aa10.38□□□□□ -0.75
NECAP1-220ENST00000639841 ANKRD33BA6NCL7 494 aa10.38□□□□□ -0.75
NECAP1-220ENST00000639841 MARSP56192 900 aaKnown RBP10.38□□□□□ -0.75
NECAP1-220ENST00000639841 METTL3Q86U44 580 aaKnown RBP10.38□□□□□ -0.75
NECAP1-220ENST00000639841 FRMPD1Q5SYB0 1578 aa10.38□□□□□ -0.75
NECAP1-220ENST00000639841 PRR7Q8TB68 274 aa10.37□□□□□ -0.75
NECAP1-220ENST00000639841 KIF12Q96FN5 646 aa10.37□□□□□ -0.75
NECAP1-220ENST00000639841 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.37□□□□□ -0.75
NECAP1-220ENST00000639841 RICTORQ6R327 1708 aa10.37□□□□□ -0.75
NECAP1-220ENST00000639841 DIXDC1Q155Q3 683 aa10.37□□□□□ -0.75
NECAP1-220ENST00000639841 POTEGQ6S5H5 508 aa10.37□□□□□ -0.75
NECAP1-220ENST00000639841 SLAIN2Q9P270 581 aa10.37□□□□□ -0.75
NECAP1-220ENST00000639841 TICAM2Q86XR7 235 aa10.36□□□□□ -0.75
NECAP1-220ENST00000639841 SPIRE2Q8WWL2 714 aa10.36□□□□□ -0.75
NECAP1-220ENST00000639841 LMTK3Q96Q04 1460 aa10.36□□□□□ -0.75
NECAP1-220ENST00000639841 C19orf67A6NJJ6 358 aa10.35□□□□□ -0.75
NECAP1-220ENST00000639841 RTL5Q5HYW3 569 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-220ENST00000639841 RIMS1Q86UR5 1692 aaKnown RBP10.35□□□□□ -0.75
NECAP1-220ENST00000639841 SPTLC1O15269 473 aa10.35□□□□□ -0.75
NECAP1-220ENST00000639841 CSPP1Q1MSJ5 1256 aa10.35□□□□□ -0.75
NECAP1-220ENST00000639841 UPF1Q92900 1129 aaKnown RBP eCLIP10.35□□□□□ -0.754e-7■■■□□ 15.7
NECAP1-220ENST00000639841 ZFYVE16Q7Z3T8 1539 aa10.35□□□□□ -0.75
NECAP1-220ENST00000639841 ARID4AP29374 1257 aaPredicted RBP10.34□□□□□ -0.75
NECAP1-220ENST00000639841 SERPINB4P48594 390 aa10.34□□□□□ -0.75
NECAP1-220ENST00000639841 ELOAQ14241 798 aaKnown RBP10.34□□□□□ -0.75
NECAP1-220ENST00000639841 TBC1D9Q6ZT07 1266 aa10.34□□□□□ -0.75
NECAP1-220ENST00000639841 LILRB3O75022 631 aa10.34□□□□□ -0.75
NECAP1-220ENST00000639841 SSFA2P28290 1259 aa10.34□□□□□ -0.75
NECAP1-220ENST00000639841 ZNF326Q5BKZ1 582 aaKnown RBP10.34□□□□□ -0.75
NECAP1-220ENST00000639841 FBXO33Q7Z6M2 555 aa10.34□□□□□ -0.75
NECAP1-220ENST00000639841 MICAL1Q8TDZ2 1067 aa10.34□□□□□ -0.75
NECAP1-220ENST00000639841 PRDM16Q9HAZ2 1276 aa10.34□□□□□ -0.75
NECAP1-220ENST00000639841 NUP153P49790 1475 aaKnown RBP10.33□□□□□ -0.76
NECAP1-220ENST00000639841 TTC37Q6PGP7 1564 aa10.33□□□□□ -0.76
NECAP1-220ENST00000639841 PLEKHD1A6NEE1 506 aa10.33□□□□□ -0.76
NECAP1-220ENST00000639841 KANK4Q5T7N3 995 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-220ENST00000639841 CHADLQ6NUI6 762 aa10.33□□□□□ -0.76
NECAP1-220ENST00000639841 RSBN1LQ6PCB5 846 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-220ENST00000639841 TMC2Q8TDI7 906 aa10.33□□□□□ -0.76
NECAP1-220ENST00000639841 ZNF526Q8TF50 670 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-220ENST00000639841 L3MBTL3Q96JM7 780 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-220ENST00000639841 LOC102724159A0A0B4J2E5 919 aa10.32□□□□□ -0.76
NECAP1-220ENST00000639841 PWP2Q15269 919 aaKnown RBP10.32□□□□□ -0.76
NECAP1-220ENST00000639841 TRIM34Q9BYJ4 488 aa10.32□□□□□ -0.76
NECAP1-220ENST00000639841 HMX1Q9NP08 348 aaPredicted RBP10.32□□□□□ -0.76
NECAP1-220ENST00000639841 RIPOR2Q9Y4F9 1068 aa10.32□□□□□ -0.76
NECAP1-220ENST00000639841 RBM46Q8TBY0 533 aaKnown RBP10.32□□□□□ -0.76
NECAP1-220ENST00000639841 RAB11FIP3O75154 756 aa10.31□□□□□ -0.76
NECAP1-220ENST00000639841 BCCIPQ9P287 314 aaKnown RBP eCLIP10.31□□□□□ -0.76
NECAP1-220ENST00000639841 FER1L4A9Z1Z3 1794 aa10.31□□□□□ -0.76
NECAP1-220ENST00000639841 PREX1Q8TCU6 1659 aa10.3□□□□□ -0.76
NECAP1-220ENST00000639841 PXYLP1Q8TE99 480 aa10.3□□□□□ -0.76
NECAP1-220ENST00000639841 PPME1Q9Y570 386 aa10.3□□□□□ -0.76
NECAP1-220ENST00000639841 RAPGEF3O95398 923 aa10.29□□□□□ -0.76
NECAP1-220ENST00000639841 ERCC5P28715 1186 aaPredicted RBP10.29□□□□□ -0.76
NECAP1-220ENST00000639841 PCDHB15Q9Y5E8 787 aa10.29□□□□□ -0.76
NECAP1-220ENST00000639841 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.29□□□□□ -0.76
NECAP1-220ENST00000639841 GOLGA2Q08379 1002 aa10.28□□□□□ -0.76
NECAP1-220ENST00000639841 GPATCH3Q96I76 525 aa10.28□□□□□ -0.76
NECAP1-220ENST00000639841 SUGT1Q9Y2Z0 365 aa10.28□□□□□ -0.76
NECAP1-220ENST00000639841 C9orf84Q5VXU9 1444 aa10.28□□□□□ -0.76
NECAP1-220ENST00000639841 REREQ9P2R6 1566 aa10.28□□□□□ -0.76
NECAP1-220ENST00000639841 TSNAXIP1Q2TAA8 658 aa10.28□□□□□ -0.76
NECAP1-220ENST00000639841 CDCA7Q9BWT1 371 aaPredicted RBP10.28□□□□□ -0.76
NECAP1-220ENST00000639841 LNPKQ9C0E8 428 aa10.28□□□□□ -0.76
NECAP1-220ENST00000639841 SBNO2Q9Y2G9 1366 aa10.27□□□□□ -0.77
NECAP1-220ENST00000639841 ARHGEF12Q9NZN5 1544 aa10.27□□□□□ -0.77
NECAP1-220ENST00000639841 MOXD2PA6NHM9 499 aa10.27□□□□□ -0.77
NECAP1-220ENST00000639841 CLSTN1O94985 981 aa10.27□□□□□ -0.77
NECAP1-220ENST00000639841 SLC52A1Q9NWF4 448 aa10.27□□□□□ -0.77
NECAP1-220ENST00000639841 MYO5CQ9NQX4 1742 aa10.27□□□□□ -0.77
NECAP1-220ENST00000639841 HECW1Q76N89 1606 aa10.27□□□□□ -0.77
NECAP1-220ENST00000639841 C2orf72A6NCS6 295 aa10.26□□□□□ -0.77
NECAP1-220ENST00000639841 KIF3CO14782 793 aa10.26□□□□□ -0.77
NECAP1-220ENST00000639841 NOP9Q86U38 636 aaKnown RBP10.26□□□□□ -0.77
NECAP1-220ENST00000639841 DNAJC2Q99543 621 aaKnown RBP10.26□□□□□ -0.77
NECAP1-220ENST00000639841 ATP10AO60312 1499 aa10.26□□□□□ -0.77
NECAP1-220ENST00000639841 IQSEC2Q5JU85 1478 aa10.26□□□□□ -0.77
NECAP1-220ENST00000639841 PLCH2O75038 1416 aa10.26□□□□□ -0.77
NECAP1-220ENST00000639841 ATP9BO43861 1147 aa10.26□□□□□ -0.77
NECAP1-220ENST00000639841 EN1Q05925 392 aaPredicted RBP10.26□□□□□ -0.77
NECAP1-220ENST00000639841 NOVA2Q9UNW9 492 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms