RNA–Protein interactions for RNA: ENST00000639496.1

KCNQ3-208, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 4,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-208ENST00000639496 KCNH5Q8NCM2 988 aa12.38□□□□□ -0.43
KCNQ3-208ENST00000639496 SLC12A5Q9H2X9 1139 aa12.38□□□□□ -0.43
KCNQ3-208ENST00000639496 C9orf84Q5VXU9 1444 aa12.38□□□□□ -0.43
KCNQ3-208ENST00000639496 BRD4O60885 1362 aaPredicted RBP12.37□□□□□ -0.43
KCNQ3-208ENST00000639496 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.37□□□□□ -0.43
KCNQ3-208ENST00000639496 ATAD2Q6PL18 1390 aa12.37□□□□□ -0.43
KCNQ3-208ENST00000639496 WWC2Q6AWC2 1192 aa12.37□□□□□ -0.43
KCNQ3-208ENST00000639496 CCDC61Q9Y6R9 512 aa12.37□□□□□ -0.43
KCNQ3-208ENST00000639496 CNTLNQ9NXG0 1405 aa12.37□□□□□ -0.43
KCNQ3-208ENST00000639496 CDC45O75419 566 aa12.37□□□□□ -0.43
KCNQ3-208ENST00000639496 NACAP1Q9BZK3 213 aa12.36□□□□□ -0.43
KCNQ3-208ENST00000639496 ADAMTS8Q9UP79 889 aa12.36□□□□□ -0.43
KCNQ3-208ENST00000639496 GNAI2P04899 355 aa12.36□□□□□ -0.43
KCNQ3-208ENST00000639496 CT47A1Q5JQC4 288 aaPredicted RBP12.36□□□□□ -0.43
KCNQ3-208ENST00000639496 MTMR7Q9Y216 660 aa12.36□□□□□ -0.43
KCNQ3-208ENST00000639496 CCAR2Q8N163 923 aaKnown RBP12.35□□□□□ -0.43
KCNQ3-208ENST00000639496 SRCIN1Q9C0H9 1055 aa12.35□□□□□ -0.43
KCNQ3-208ENST00000639496 DMRT2Q9Y5R5 561 aa12.35□□□□□ -0.43
KCNQ3-208ENST00000639496 DNAJC2Q99543 621 aaKnown RBP12.35□□□□□ -0.43
KCNQ3-208ENST00000639496 OFD1O75665 1012 aa12.35□□□□□ -0.43
KCNQ3-208ENST00000639496 CCDC57Q2TAC2 916 aa12.35□□□□□ -0.43
KCNQ3-208ENST00000639496 ODF2Q5BJF6 829 aa12.35□□□□□ -0.43
KCNQ3-208ENST00000639496 CHMP5Q9NZZ3 219 aa12.35□□□□□ -0.43
KCNQ3-208ENST00000639496 PPP2R1AP30153 589 aa12.35□□□□□ -0.43
KCNQ3-208ENST00000639496 CCT4P50991 539 aaKnown RBP12.35□□□□□ -0.43
KCNQ3-208ENST00000639496 SLC4A2P04920 1241 aa12.34□□□□□ -0.43
KCNQ3-208ENST00000639496 TTC39AQ5SRH9 613 aa12.34□□□□□ -0.43
KCNQ3-208ENST00000639496 SASS6Q6UVJ0 657 aa12.34□□□□□ -0.43
KCNQ3-208ENST00000639496 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.34□□□□□ -0.43
KCNQ3-208ENST00000639496 STARD3NLO95772 234 aa12.34□□□□□ -0.43
KCNQ3-208ENST00000639496 PDCP20941 246 aa12.34□□□□□ -0.43
KCNQ3-208ENST00000639496 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.33□□□□□ -0.44
KCNQ3-208ENST00000639496 EXOSC9Q06265 439 aaKnown RBP12.33□□□□□ -0.44
KCNQ3-208ENST00000639496 KIF21BO75037 1637 aa12.33□□□□□ -0.44
KCNQ3-208ENST00000639496 ZC3H6P61129 1189 aaKnown RBP12.33□□□□□ -0.44
KCNQ3-208ENST00000639496 GPS2Q13227 327 aa12.33□□□□□ -0.44
KCNQ3-208ENST00000639496 ZSCAN25Q6NSZ9 544 aa12.33□□□□□ -0.44
KCNQ3-208ENST00000639496 PANK1Q8TE04 598 aa12.33□□□□□ -0.44
KCNQ3-208ENST00000639496 SLC4A3P48751 1232 aa12.33□□□□□ -0.44
KCNQ3-208ENST00000639496 NBPF1Q3BBV0 1214 aa12.33□□□□□ -0.44
KCNQ3-208ENST00000639496 TXLNAP40222 546 aa12.32□□□□□ -0.44
KCNQ3-208ENST00000639496 EPS15P42566 896 aa12.32□□□□□ -0.44
KCNQ3-208ENST00000639496 TMEM132AQ24JP5 1023 aa12.32□□□□□ -0.44
KCNQ3-208ENST00000639496 CEP126Q9P2H0 1117 aa12.32□□□□□ -0.44
KCNQ3-208ENST00000639496 CT47B1P0C2W7 299 aaPredicted RBP12.32□□□□□ -0.44
KCNQ3-208ENST00000639496 SDF4Q9BRK5 362 aa12.32□□□□□ -0.44
KCNQ3-208ENST00000639496 RRP12Q5JTH9 1297 aaKnown RBP12.32□□□□□ -0.44
KCNQ3-208ENST00000639496 ATP2B2Q01814 1243 aa12.32□□□□□ -0.44
KCNQ3-208ENST00000639496 TMOD2Q9NZR1 351 aa12.32□□□□□ -0.44
KCNQ3-208ENST00000639496 KIAA1107Q9UPP5 1409 aa12.31□□□□□ -0.44
KCNQ3-208ENST00000639496 NESP48681 1621 aa12.31□□□□□ -0.44
KCNQ3-208ENST00000639496 ZNF652Q9Y2D9 606 aa12.31□□□□□ -0.44
KCNQ3-208ENST00000639496 CDK5RAP3Q96JB5 506 aa12.31□□□□□ -0.44
KCNQ3-208ENST00000639496 C22orf23Q9BZE7 217 aa12.31□□□□□ -0.44
KCNQ3-208ENST00000639496 SNAPC4Q5SXM2 1469 aa12.31□□□□□ -0.44
KCNQ3-208ENST00000639496 RBM5P52756 815 aaKnown RBP eCLIP12.31□□□□□ -0.44
KCNQ3-208ENST00000639496 WDHD1O75717 1129 aaPredicted RBP12.3□□□□□ -0.44
KCNQ3-208ENST00000639496 MCM2P49736 904 aa12.3□□□□□ -0.44
KCNQ3-208ENST00000639496 GCC1Q96CN9 775 aa12.3□□□□□ -0.44
KCNQ3-208ENST00000639496 OLFM4Q6UX06 510 aa12.3□□□□□ -0.44
KCNQ3-208ENST00000639496 NUDT16Q96DE0 195 aaKnown RBP12.3□□□□□ -0.44
KCNQ3-208ENST00000639496 EFCAB5A4FU69 1503 aa12.3□□□□□ -0.44
KCNQ3-208ENST00000639496 NAT10Q9H0A0 1025 aaKnown RBP12.3□□□□□ -0.44
KCNQ3-208ENST00000639496 TOPBP1Q92547 1522 aa12.29□□□□□ -0.44
KCNQ3-208ENST00000639496 FOSBP53539 338 aa12.29□□□□□ -0.44
KCNQ3-208ENST00000639496 TRIM22Q8IYM9 498 aa12.29□□□□□ -0.44
KCNQ3-208ENST00000639496 MYL6BP14649 208 aa12.29□□□□□ -0.44
KCNQ3-208ENST00000639496 IGHMBP2P38935 993 aaKnown RBP12.29□□□□□ -0.44
KCNQ3-208ENST00000639496 XPCQ01831 940 aaPredicted RBP12.29□□□□□ -0.44
KCNQ3-208ENST00000639496 HOMER1Q86YM7 354 aa12.29□□□□□ -0.44
KCNQ3-208ENST00000639496 ZNF428Q96B54 188 aa12.29□□□□□ -0.44
KCNQ3-208ENST00000639496 BTBD11A6QL63 1104 aa12.29□□□□□ -0.44
KCNQ3-208ENST00000639496 PDE3AQ14432 1141 aa12.29□□□□□ -0.44
KCNQ3-208ENST00000639496 CD109Q6YHK3 1445 aa12.29□□□□□ -0.44
KCNQ3-208ENST00000639496 ERBINQ96RT1 1412 aa12.29□□□□□ -0.44
KCNQ3-208ENST00000639496 ATP2B1P20020 1258 aa12.28□□□□□ -0.44
KCNQ3-208ENST00000639496 ZSCAN29Q8IWY8 852 aaPredicted RBP12.28□□□□□ -0.44
KCNQ3-208ENST00000639496 FCHSD2O94868 740 aa12.28□□□□□ -0.44
KCNQ3-208ENST00000639496 RDXP35241 583 aaKnown RBP12.28□□□□□ -0.44
KCNQ3-208ENST00000639496 ERICH3Q5RHP9 1530 aa12.28□□□□□ -0.44
KCNQ3-208ENST00000639496 NAP1L1P55209 391 aaKnown RBP12.28□□□□□ -0.44
KCNQ3-208ENST00000639496 JMYQ8N9B5 988 aa12.28□□□□□ -0.44
KCNQ3-208ENST00000639496 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.28□□□□□ -0.44
KCNQ3-208ENST00000639496 KRT18P05783 430 aaKnown RBP12.27□□□□□ -0.44
KCNQ3-208ENST00000639496 ZFYVE27Q5T4F4 411 aa12.27□□□□□ -0.44
KCNQ3-208ENST00000639496 WDR63Q8IWG1 891 aa12.27□□□□□ -0.44
KCNQ3-208ENST00000639496 PAF1Q8N7H5 531 aa12.27□□□□□ -0.44
KCNQ3-208ENST00000639496 NGLY1Q96IV0 654 aa12.27□□□□□ -0.44
KCNQ3-208ENST00000639496 CCDC173Q0VFZ6 552 aa12.27□□□□□ -0.45
KCNQ3-208ENST00000639496 SOGA3Q5TF21 947 aa12.27□□□□□ -0.45
KCNQ3-208ENST00000639496 KIAA0586Q9BVV6 1533 aa12.27□□□□□ -0.45
KCNQ3-208ENST00000639496 ZPR1O75312 459 aa12.27□□□□□ -0.45
KCNQ3-208ENST00000639496 POLA1P09884 1462 aaPredicted RBP12.27□□□□□ -0.45
KCNQ3-208ENST00000639496 PIP4K2AP48426 406 aaPredicted RBP12.26□□□□□ -0.45
KCNQ3-208ENST00000639496 TMOD3Q9NYL9 352 aa12.26□□□□□ -0.45
KCNQ3-208ENST00000639496 LRRCC1Q9C099 1032 aa12.26□□□□□ -0.45
KCNQ3-208ENST00000639496 EHBP1L1Q8N3D4 1523 aa12.26□□□□□ -0.45
KCNQ3-208ENST00000639496 CTNNA3Q9UI47 895 aa12.26□□□□□ -0.45
KCNQ3-208ENST00000639496 AMOTQ4VCS5 1084 aa12.25□□□□□ -0.45
KCNQ3-208ENST00000639496 SIL1Q9H173 461 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms