RNA–Protein interactions for RNA: ENST00000638824.1

NEK1-209, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 3,642 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-209ENST00000638824 POGKQ9P215 609 aa4.1□□□□□ -1.75
NEK1-209ENST00000638824 EIF3AQ14152 1382 aaKnown RBP4.1□□□□□ -1.75
NEK1-209ENST00000638824 MYOM1P52179 1685 aa4.1□□□□□ -1.75
NEK1-209ENST00000638824 ST20-MTHFSA0A0A6YYL1 179 aa4.1□□□□□ -1.75
NEK1-209ENST00000638824 NUTM2FA1L443 756 aa4.1□□□□□ -1.75
NEK1-209ENST00000638824 ITSN1Q15811 1721 aa4.09□□□□□ -1.75
NEK1-209ENST00000638824 HSPA5P11021 654 aaKnown RBP4.09□□□□□ -1.75
NEK1-209ENST00000638824 ZNF692Q9BU19 519 aaPredicted RBP4.09□□□□□ -1.75
NEK1-209ENST00000638824 ROBO1Q9Y6N7 1651 aa4.09□□□□□ -1.75
NEK1-209ENST00000638824 DISP3Q9P2K9 1392 aa4.09□□□□□ -1.75
NEK1-209ENST00000638824 HAX1O00165 279 aa4.09□□□□□ -1.75
NEK1-209ENST00000638824 MSH6P52701 1360 aa4.09□□□□□ -1.75
NEK1-209ENST00000638824 CERKQ8TCT0 537 aa4.09□□□□□ -1.76
NEK1-209ENST00000638824 ATP7BP35670 1465 aa4.09□□□□□ -1.76
NEK1-209ENST00000638824 MST1RQ04912 1400 aa4.08□□□□□ -1.76
NEK1-209ENST00000638824 ZEB1P37275 1124 aaPredicted RBP4.08□□□□□ -1.76
NEK1-209ENST00000638824 TESK2Q96S53 571 aa4.08□□□□□ -1.76
NEK1-209ENST00000638824 DCCP43146 1447 aa4.08□□□□□ -1.76
NEK1-209ENST00000638824 EIF4G2P78344 907 aaKnown RBP eCLIP4.08□□□□□ -1.76
NEK1-209ENST00000638824 IQSEC2Q5JU85 1478 aa4.08□□□□□ -1.76
NEK1-209ENST00000638824 CLEC11AQ9Y240 323 aa4.08□□□□□ -1.76
NEK1-209ENST00000638824 NCOA3Q9Y6Q9 1424 aa4.08□□□□□ -1.76
NEK1-209ENST00000638824 PRR36Q9H6K5 1346 aa4.07□□□□□ -1.76
NEK1-209ENST00000638824 SBNO2Q9Y2G9 1366 aa4.07□□□□□ -1.76
NEK1-209ENST00000638824 SIRT1Q96EB6 747 aa4.07□□□□□ -1.76
NEK1-209ENST00000638824 C19orf44Q9H6X5 657 aa4.07□□□□□ -1.76
NEK1-209ENST00000638824 CABP2Q9NPB3 220 aa4.07□□□□□ -1.76
NEK1-209ENST00000638824 AKAP12Q02952 1782 aa4.07□□□□□ -1.76
NEK1-209ENST00000638824 C1orf167Q5SNV9 1468 aa4.07□□□□□ -1.76
NEK1-209ENST00000638824 NHSL1Q5SYE7 1610 aa4.07□□□□□ -1.76
NEK1-209ENST00000638824 KIF1AQ12756 1690 aa4.07□□□□□ -1.76
NEK1-209ENST00000638824 C11orf95C9JLR9 678 aaPredicted RBP4.07□□□□□ -1.76
NEK1-209ENST00000638824 WASLO00401 505 aaPredicted RBP4.07□□□□□ -1.76
NEK1-209ENST00000638824 ATF3P18847 181 aa4.07□□□□□ -1.76
NEK1-209ENST00000638824 BRPF1P55201 1214 aaPredicted RBP4.07□□□□□ -1.76
NEK1-209ENST00000638824 PIP4K2BP78356 416 aa4.07□□□□□ -1.76
NEK1-209ENST00000638824 CDK19Q9BWU1 502 aa4.07□□□□□ -1.76
NEK1-209ENST00000638824 UBAP1LF5GYI3 381 aa4.07□□□□□ -1.76
NEK1-209ENST00000638824 PHLPP1O60346 1717 aa4.07□□□□□ -1.76
NEK1-209ENST00000638824 SRPK2P78362 688 aaKnown RBP4.07□□□□□ -1.76
NEK1-209ENST00000638824 IFNLR1Q8IU57 520 aaPredicted RBP4.07□□□□□ -1.76
NEK1-209ENST00000638824 MON2Q7Z3U7 1717 aa4.06□□□□□ -1.76
NEK1-209ENST00000638824 DDX17Q92841 729 aaKnown RBP4.06□□□□□ -1.76
NEK1-209ENST00000638824 ORAI2Q96SN7 254 aa4.06□□□□□ -1.76
NEK1-209ENST00000638824 POLR3GLQ9BT43 218 aa4.06□□□□□ -1.76
NEK1-209ENST00000638824 EVC2Q86UK5 1308 aa4.06□□□□□ -1.76
NEK1-209ENST00000638824 NRKQ7Z2Y5 1582 aa4.06□□□□□ -1.76
NEK1-209ENST00000638824 PPIP5K1Q6PFW1 1433 aa4.06□□□□□ -1.76
NEK1-209ENST00000638824 SPDYE4A6NLX3 237 aa4.06□□□□□ -1.76
NEK1-209ENST00000638824 CADPS2Q86UW7 1296 aa4.06□□□□□ -1.76
NEK1-209ENST00000638824 TRPM3Q9HCF6 1732 aaPredicted RBP4.06□□□□□ -1.76
NEK1-209ENST00000638824 ANKARQ7Z5J8 1434 aa4.06□□□□□ -1.76
NEK1-209ENST00000638824 MNX1P50219 401 aaPredicted RBP4.06□□□□□ -1.76
NEK1-209ENST00000638824 PMFBP1Q8TBY8 1022 aa4.06□□□□□ -1.76
NEK1-209ENST00000638824 SLAIN2Q9P270 581 aa4.06□□□□□ -1.76
NEK1-209ENST00000638824 TMF1P82094 1093 aa4.05□□□□□ -1.76
NEK1-209ENST00000638824 XPCQ01831 940 aaPredicted RBP4.05□□□□□ -1.76
NEK1-209ENST00000638824 ESCO1Q5FWF5 840 aa4.05□□□□□ -1.76
NEK1-209ENST00000638824 BRINP3Q76B58 766 aa4.05□□□□□ -1.76
NEK1-209ENST00000638824 NUDT16Q96DE0 195 aaKnown RBP4.05□□□□□ -1.76
NEK1-209ENST00000638824 KIF7Q2M1P5 1343 aa4.05□□□□□ -1.76
NEK1-209ENST00000638824 COL16A1Q07092 1604 aaPredicted RBP4.05□□□□□ -1.76
NEK1-209ENST00000638824 CD163L1Q9NR16 1453 aa4.05□□□□□ -1.76
NEK1-209ENST00000638824 AHDC1Q5TGY3 1603 aaPredicted RBP4.05□□□□□ -1.76
NEK1-209ENST00000638824 MARF1Q9Y4F3 1742 aaKnown RBP4.05□□□□□ -1.76
NEK1-209ENST00000638824 TOM1O60784 492 aa4.04□□□□□ -1.76
NEK1-209ENST00000638824 GABBR2O75899 941 aa4.04□□□□□ -1.76
NEK1-209ENST00000638824 KIF20BQ96Q89 1820 aa4.04□□□□□ -1.76
NEK1-209ENST00000638824 WASHC2AQ641Q2 1341 aa4.04□□□□□ -1.76
NEK1-209ENST00000638824 PXDNQ92626 1479 aa4.04□□□□□ -1.76
NEK1-209ENST00000638824 PIK3C2AO00443 1686 aa4.04□□□□□ -1.76
NEK1-209ENST00000638824 ALS2Q96Q42 1657 aa4.04□□□□□ -1.76
NEK1-209ENST00000638824 ABCA3Q99758 1704 aa4.04□□□□□ -1.76
NEK1-209ENST00000638824 TMC1Q8TDI8 760 aa4.04□□□□□ -1.76
NEK1-209ENST00000638824 CABP1Q9NZU7 370 aa4.04□□□□□ -1.76
NEK1-209ENST00000638824 CCDC7Q96M83 1385 aa4.04□□□□□ -1.76
NEK1-209ENST00000638824 FOXO3O43524 673 aa4.04□□□□□ -1.76
NEK1-209ENST00000638824 SLC12A5Q9H2X9 1139 aa4.04□□□□□ -1.76
NEK1-209ENST00000638824 CREBZFQ9NS37 354 aa4.04□□□□□ -1.76
NEK1-209ENST00000638824 A0A1W2PP64 1363 aa4.04□□□□□ -1.76
NEK1-209ENST00000638824 ATAD2Q6PL18 1390 aa4.04□□□□□ -1.76
NEK1-209ENST00000638824 CRYBG1Q9Y4K1 1723 aa4.03□□□□□ -1.76
NEK1-209ENST00000638824 ACEP12821 1306 aa4.03□□□□□ -1.76
NEK1-209ENST00000638824 CDK11BP21127 795 aaKnown RBP4.03□□□□□ -1.76
NEK1-209ENST00000638824 BBXQ8WY36 941 aaPredicted RBP4.03□□□□□ -1.76
NEK1-209ENST00000638824 PHF8Q9UPP1 1060 aa4.03□□□□□ -1.76
NEK1-209ENST00000638824 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.03□□□□□ -1.76
NEK1-209ENST00000638824 CCDC61Q9Y6R9 512 aa4.03□□□□□ -1.76
NEK1-209ENST00000638824 POLR3AO14802 1390 aaPredicted RBP4.03□□□□□ -1.76
NEK1-209ENST00000638824 BCL11AQ9H165 835 aa4.03□□□□□ -1.76
NEK1-209ENST00000638824 PHRF1Q9P1Y6 1649 aaKnown RBP4.03□□□□□ -1.76
NEK1-209ENST00000638824 USP6P35125 1406 aa4.03□□□□□ -1.77
NEK1-209ENST00000638824 CPSF1Q10570 1443 aaKnown RBP4.03□□□□□ -1.77
NEK1-209ENST00000638824 ANKRD26Q9UPS8 1709 aa4.02□□□□□ -1.77
NEK1-209ENST00000638824 SHPRHQ149N8 1683 aa4.02□□□□□ -1.77
NEK1-209ENST00000638824 NGDNQ8NEJ9 315 aaKnown RBP4.02□□□□□ -1.77
NEK1-209ENST00000638824 UBE2Q2Q8WVN8 375 aa4.02□□□□□ -1.77
NEK1-209ENST00000638824 KTN1Q86UP2 1357 aaKnown RBP4.02□□□□□ -1.77
NEK1-209ENST00000638824 HSPA1LP34931 641 aa4.02□□□□□ -1.77
NEK1-209ENST00000638824 ZBTB47Q9UFB7 747 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms