RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 NRAPQ86VF7 1730 aa17.81■□□□□ 0.44
CACNA1A-250ENST00000637809 NGDNQ8NEJ9 315 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-250ENST00000637809 SPATA31A5Q5VU36 1347 aa17.79■□□□□ 0.44
CACNA1A-250ENST00000637809 SPATA31A7Q8IWB4 1347 aa17.79■□□□□ 0.44
CACNA1A-250ENST00000637809 ATP7BP35670 1465 aa17.79■□□□□ 0.44
CACNA1A-250ENST00000637809 NUDT16Q96DE0 195 aaKnown RBP17.78■□□□□ 0.44
CACNA1A-250ENST00000637809 COL14A1Q05707 1796 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-250ENST00000637809 A0A0G2JS52 829 aa17.77■□□□□ 0.44
CACNA1A-250ENST00000637809 PAK3O75914 559 aaPredicted RBP17.77■□□□□ 0.44
CACNA1A-250ENST00000637809 MYT1Q01538 1121 aa17.77■□□□□ 0.44
CACNA1A-250ENST00000637809 PRDM11Q9NQV5 511 aa17.75■□□□□ 0.43
CACNA1A-250ENST00000637809 CRYBG1Q9Y4K1 1723 aa17.75■□□□□ 0.43
CACNA1A-250ENST00000637809 FAM182BQ5T319 152 aa17.74■□□□□ 0.43
CACNA1A-250ENST00000637809 CDK19Q9BWU1 502 aa17.74■□□□□ 0.43
CACNA1A-250ENST00000637809 KIAA0232Q92628 1395 aa17.74■□□□□ 0.43
CACNA1A-250ENST00000637809 ARHGEF28Q8N1W1 1705 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-250ENST00000637809 BAG6P46379 1132 aa17.73■□□□□ 0.43
CACNA1A-250ENST00000637809 POLR3AO14802 1390 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-250ENST00000637809 SPATA31A1Q5TZJ5 1347 aa17.72■□□□□ 0.43
CACNA1A-250ENST00000637809 CHRNA2Q15822 529 aa17.72■□□□□ 0.43
CACNA1A-250ENST00000637809 THSD7AQ9UPZ6 1657 aa17.71■□□□□ 0.43
CACNA1A-250ENST00000637809 PLEKHG3A1L390 1219 aa17.71■□□□□ 0.43
CACNA1A-250ENST00000637809 NBPF8Q3BBV2 869 aa17.71■□□□□ 0.43
CACNA1A-250ENST00000637809 CCDC61Q9Y6R9 512 aa17.71■□□□□ 0.43
CACNA1A-250ENST00000637809 ACEP12821 1306 aa17.71■□□□□ 0.42
CACNA1A-250ENST00000637809 EN1Q05925 392 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-250ENST00000637809 PSDA5PKW4 1024 aaPredicted RBP17.69■□□□□ 0.42
CACNA1A-250ENST00000637809 ZC3H6P61129 1189 aaKnown RBP17.69■□□□□ 0.42
CACNA1A-250ENST00000637809 NBPF1Q3BBV0 1214 aa17.69■□□□□ 0.42
CACNA1A-250ENST00000637809 NUTM2GQ5VZR2 741 aa17.69■□□□□ 0.42
CACNA1A-250ENST00000637809 DISP2A7MBM2 1401 aa17.69■□□□□ 0.42
CACNA1A-250ENST00000637809 STRN4Q9NRL3 753 aa17.67■□□□□ 0.42
CACNA1A-250ENST00000637809 ITSN1Q15811 1721 aa17.67■□□□□ 0.42
CACNA1A-250ENST00000637809 LRP5O75197 1615 aa17.66■□□□□ 0.42
CACNA1A-250ENST00000637809 PHRF1Q9P1Y6 1649 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-250ENST00000637809 TOPAZ1Q8N9V7 1692 aa17.66■□□□□ 0.42
CACNA1A-250ENST00000637809 USP19O94966 1318 aa17.66■□□□□ 0.42
CACNA1A-250ENST00000637809 CPDO75976 1380 aa17.65■□□□□ 0.42
CACNA1A-250ENST00000637809 SSH2Q76I76 1423 aa17.64■□□□□ 0.42
CACNA1A-250ENST00000637809 BARGINQ6ZT62 677 aa17.64■□□□□ 0.41
CACNA1A-250ENST00000637809 ABTB2Q8N961 1025 aa17.64■□□□□ 0.41
CACNA1A-250ENST00000637809 NRKQ7Z2Y5 1582 aa17.63■□□□□ 0.41
CACNA1A-250ENST00000637809 EZH2Q15910 746 aaKnown RBP17.63■□□□□ 0.41
CACNA1A-250ENST00000637809 FAM196AQ6ZSG2 479 aa17.63■□□□□ 0.41
CACNA1A-250ENST00000637809 CAMKK2Q96RR4 588 aa17.63■□□□□ 0.41
CACNA1A-250ENST00000637809 CAMTA1Q9Y6Y1 1673 aa17.63■□□□□ 0.41
CACNA1A-250ENST00000637809 KIAA1210Q9ULL0 1709 aa17.63■□□□□ 0.41
CACNA1A-250ENST00000637809 RGPD1P0DJD0 1748 aa17.62■□□□□ 0.41
CACNA1A-250ENST00000637809 TRIM37O94972 964 aa17.62■□□□□ 0.41
CACNA1A-250ENST00000637809 R3HDM1Q15032 1099 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-250ENST00000637809 LARP1Q6PKG0 1096 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-250ENST00000637809 USP35Q9P2H5 1018 aa17.62■□□□□ 0.41
CACNA1A-250ENST00000637809 EVA1CP58658 441 aa17.61■□□□□ 0.41
CACNA1A-250ENST00000637809 CABP2Q9NPB3 220 aa17.61■□□□□ 0.41
CACNA1A-250ENST00000637809 CENPJQ9HC77 1338 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-250ENST00000637809 PPIP5K1Q6PFW1 1433 aa17.61■□□□□ 0.41
CACNA1A-250ENST00000637809 TNS1Q9HBL0 1735 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-250ENST00000637809 GCP02774 474 aa17.6■□□□□ 0.41
CACNA1A-250ENST00000637809 SRPK2P78362 688 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-250ENST00000637809 LMO7Q8WWI1 1683 aa17.59■□□□□ 0.41
CACNA1A-250ENST00000637809 NLRP13Q86W25 1043 aa17.59■□□□□ 0.41
CACNA1A-250ENST00000637809 TCP11L2Q8N4U5 519 aa17.59■□□□□ 0.41
CACNA1A-250ENST00000637809 BRD4O60885 1362 aaPredicted RBP17.57■□□□□ 0.4
CACNA1A-250ENST00000637809 PARD3Q8TEW0 1356 aa17.57■□□□□ 0.4
CACNA1A-250ENST00000637809 APBA3O96018 575 aa17.57■□□□□ 0.4
CACNA1A-250ENST00000637809 PDE3BQ13370 1112 aa17.56■□□□□ 0.4
CACNA1A-250ENST00000637809 CABP1Q9NZU7 370 aa17.56■□□□□ 0.4
CACNA1A-250ENST00000637809 THRAP3Q9Y2W1 955 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-250ENST00000637809 COL5A2P05997 1499 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-250ENST00000637809 USP6P35125 1406 aa17.55■□□□□ 0.4
CACNA1A-250ENST00000637809 L3MBTL2Q969R5 705 aa17.54■□□□□ 0.4
CACNA1A-250ENST00000637809 AATKQ6ZMQ8 1374 aa17.53■□□□□ 0.4
CACNA1A-250ENST00000637809 NLRP6P59044 892 aa17.52■□□□□ 0.4
CACNA1A-250ENST00000637809 SLIT3O75094 1523 aa17.52■□□□□ 0.39
CACNA1A-250ENST00000637809 CRB1P82279 1406 aa17.51■□□□□ 0.39
CACNA1A-250ENST00000637809 QRICH2Q9H0J4 1663 aa17.49■□□□□ 0.39
CACNA1A-250ENST00000637809 EVC2Q86UK5 1308 aa17.48■□□□□ 0.39
CACNA1A-250ENST00000637809 AXIN2Q9Y2T1 843 aa17.48■□□□□ 0.39
CACNA1A-250ENST00000637809 ZBTB7CA1YPR0 619 aa17.47■□□□□ 0.39
CACNA1A-250ENST00000637809 SIN3AQ96ST3 1273 aa17.47■□□□□ 0.39
CACNA1A-250ENST00000637809 RREB1Q92766 1687 aa17.47■□□□□ 0.39
CACNA1A-250ENST00000637809 PARP4Q9UKK3 1724 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-250ENST00000637809 C11orf95C9JLR9 678 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-250ENST00000637809 OVOS2A0A0G2JMS6 1433 aa17.46■□□□□ 0.39
CACNA1A-250ENST00000637809 OVOS2A0A0J9YW53 1432 aa17.46■□□□□ 0.39
CACNA1A-250ENST00000637809 OVOS2Q6IE36 1432 aa17.46■□□□□ 0.39
CACNA1A-250ENST00000637809 TTC21BQ7Z4L5 1316 aa17.46■□□□□ 0.38
CACNA1A-250ENST00000637809 PIK3C2AO00443 1686 aa17.45■□□□□ 0.38
CACNA1A-250ENST00000637809 NBPF14Q5TI25 921 aa17.45■□□□□ 0.38
CACNA1A-250ENST00000637809 ARHGEF25Q86VW2 580 aa17.45■□□□□ 0.38
CACNA1A-250ENST00000637809 CPSF1Q10570 1443 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-250ENST00000637809 WDR17Q8IZU2 1322 aa17.45■□□□□ 0.38
CACNA1A-250ENST00000637809 NUP188Q5SRE5 1749 aa17.44■□□□□ 0.38
CACNA1A-250ENST00000637809 PEAK1Q9H792 1746 aa17.44■□□□□ 0.38
CACNA1A-250ENST00000637809 TOM1L2Q6ZVM7 507 aa17.44■□□□□ 0.38
CACNA1A-250ENST00000637809 ZNF692Q9BU19 519 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-250ENST00000637809 TRPM1Q7Z4N2 1603 aa17.43■□□□□ 0.38
CACNA1A-250ENST00000637809 COL18A1P39060 1754 aa17.43■□□□□ 0.38
CACNA1A-250ENST00000637809 ROCK2O75116 1388 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-250ENST00000637809 DDB1Q16531 1140 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms