RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 NUTM2GQ5VZR2 741 aa20.29■□□□□ 0.84
CACNA1A-249ENST00000637777 ATAD2Q6PL18 1390 aa20.29■□□□□ 0.84
CACNA1A-249ENST00000637777 RXRBP28702 533 aa20.28■□□□□ 0.84
CACNA1A-249ENST00000637777 QTRT2Q9H974 415 aaKnown RBP20.28■□□□□ 0.84
CACNA1A-249ENST00000637777 USP47Q96K76 1375 aa20.27■□□□□ 0.84
CACNA1A-249ENST00000637777 SBNO2Q9Y2G9 1366 aa20.27■□□□□ 0.84
CACNA1A-249ENST00000637777 ST20-MTHFSA0A0A6YYL1 179 aa20.27■□□□□ 0.84
CACNA1A-249ENST00000637777 TMC1Q8TDI8 760 aa20.27■□□□□ 0.84
CACNA1A-249ENST00000637777 ABTB2Q8N961 1025 aa20.26■□□□□ 0.83
CACNA1A-249ENST00000637777 TRPC5Q9UL62 973 aaPredicted RBP20.24■□□□□ 0.83
CACNA1A-249ENST00000637777 USP6P35125 1406 aa20.22■□□□□ 0.83
CACNA1A-249ENST00000637777 FNBP4Q8N3X1 1017 aaPredicted RBP20.22■□□□□ 0.83
CACNA1A-249ENST00000637777 PLCH1Q4KWH8 1693 aa20.22■□□□□ 0.83
CACNA1A-249ENST00000637777 SLC24A1O60721 1099 aa20.21■□□□□ 0.83
CACNA1A-249ENST00000637777 RBM6P78332 1123 aaKnown RBP20.21■□□□□ 0.83
CACNA1A-249ENST00000637777 CCDC9Q9Y3X0 531 aaKnown RBP20.21■□□□□ 0.83
CACNA1A-249ENST00000637777 AKAP12Q02952 1782 aa20.2■□□□□ 0.82
CACNA1A-249ENST00000637777 PHRF1Q9P1Y6 1649 aaKnown RBP20.2■□□□□ 0.82
CACNA1A-249ENST00000637777 TMF1P82094 1093 aa20.19■□□□□ 0.82
CACNA1A-249ENST00000637777 HDGFL2Q7Z4V5 671 aaPredicted RBP20.19■□□□□ 0.82
CACNA1A-249ENST00000637777 ZNF692Q9BU19 519 aaPredicted RBP20.19■□□□□ 0.82
CACNA1A-249ENST00000637777 PRDM11Q9NQV5 511 aa20.19■□□□□ 0.82
CACNA1A-249ENST00000637777 KTN1Q86UP2 1357 aaKnown RBP20.19■□□□□ 0.82
CACNA1A-249ENST00000637777 CRYBG1Q9Y4K1 1723 aa20.19■□□□□ 0.82
CACNA1A-249ENST00000637777 ZBTB7CA1YPR0 619 aa20.18■□□□□ 0.82
CACNA1A-249ENST00000637777 NLRP13Q86W25 1043 aa20.18■□□□□ 0.82
CACNA1A-249ENST00000637777 UNC5CLQ8IV45 518 aa20.18■□□□□ 0.82
CACNA1A-249ENST00000637777 BRD4O60885 1362 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-249ENST00000637777 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.17■□□□□ 0.82
CACNA1A-249ENST00000637777 NLRP6P59044 892 aa20.17■□□□□ 0.82
CACNA1A-249ENST00000637777 ZC3H6P61129 1189 aaKnown RBP20.17■□□□□ 0.82
CACNA1A-249ENST00000637777 TESK2Q96S53 571 aa20.17■□□□□ 0.82
CACNA1A-249ENST00000637777 ATRNO75882 1429 aa20.17■□□□□ 0.82
CACNA1A-249ENST00000637777 BCL9LQ86UU0 1499 aa20.17■□□□□ 0.82
CACNA1A-249ENST00000637777 NWD2Q9ULI1 1742 aa20.16■□□□□ 0.82
CACNA1A-249ENST00000637777 COL14A1Q05707 1796 aaKnown RBP20.16■□□□□ 0.82
CACNA1A-249ENST00000637777 SLIT2O94813 1529 aa20.16■□□□□ 0.82
CACNA1A-249ENST00000637777 FAM83GA6ND36 823 aa20.15■□□□□ 0.82
CACNA1A-249ENST00000637777 BTG4Q9NY30 223 aa20.15■□□□□ 0.82
CACNA1A-249ENST00000637777 TERF2IPQ9NYB0 399 aa20.15■□□□□ 0.82
CACNA1A-249ENST00000637777 KIAA0232Q92628 1395 aa20.15■□□□□ 0.82
CACNA1A-249ENST00000637777 TTC21BQ7Z4L5 1316 aa20.14■□□□□ 0.81
CACNA1A-249ENST00000637777 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.14■□□□□ 0.81
CACNA1A-249ENST00000637777 SLC12A5Q9H2X9 1139 aa20.14■□□□□ 0.81
CACNA1A-249ENST00000637777 MON2Q7Z3U7 1717 aa20.13■□□□□ 0.81
CACNA1A-249ENST00000637777 PIK3C2AO00443 1686 aa20.13■□□□□ 0.81
CACNA1A-249ENST00000637777 NRKQ7Z2Y5 1582 aa20.13■□□□□ 0.81
CACNA1A-249ENST00000637777 CDK12Q9NYV4 1490 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-249ENST00000637777 RGS12O14924 1447 aa20.13■□□□□ 0.81
CACNA1A-249ENST00000637777 CHRNA2Q15822 529 aa20.13■□□□□ 0.81
CACNA1A-249ENST00000637777 POLR3GLQ9BT43 218 aa20.13■□□□□ 0.81
CACNA1A-249ENST00000637777 TTC21AQ8NDW8 1320 aa20.12■□□□□ 0.81
CACNA1A-249ENST00000637777 A0A0G2JS52 829 aa20.12■□□□□ 0.81
CACNA1A-249ENST00000637777 SOX12O15370 315 aa20.12■□□□□ 0.81
CACNA1A-249ENST00000637777 MYT1Q01538 1121 aa20.12■□□□□ 0.81
CACNA1A-249ENST00000637777 CDCA8Q53HL2 280 aa20.12■□□□□ 0.81
CACNA1A-249ENST00000637777 GJD4Q96KN9 370 aaPredicted RBP20.12■□□□□ 0.81
CACNA1A-249ENST00000637777 CPSF1Q10570 1443 aaKnown RBP20.11■□□□□ 0.81
CACNA1A-249ENST00000637777 PUS7Q96PZ0 661 aaKnown RBP20.11■□□□□ 0.81
CACNA1A-249ENST00000637777 USP19O94966 1318 aa20.1■□□□□ 0.81
CACNA1A-249ENST00000637777 STRN4Q9NRL3 753 aa20.1■□□□□ 0.81
CACNA1A-249ENST00000637777 A0A1W2PP64 1363 aa20.09■□□□□ 0.81
CACNA1A-249ENST00000637777 NINLQ9Y2I6 1382 aa20.09■□□□□ 0.81
CACNA1A-249ENST00000637777 GCP02774 474 aa20.09■□□□□ 0.81
CACNA1A-249ENST00000637777 EIF4G2P78344 907 aaKnown RBP eCLIP20.09■□□□□ 0.81
CACNA1A-249ENST00000637777 NRAPQ86VF7 1730 aa20.09■□□□□ 0.81
CACNA1A-249ENST00000637777 EVA1CP58658 441 aa20.08■□□□□ 0.81
CACNA1A-249ENST00000637777 VPS72Q15906 364 aa20.08■□□□□ 0.81
CACNA1A-249ENST00000637777 SSH2Q76I76 1423 aa20.08■□□□□ 0.8
CACNA1A-249ENST00000637777 CD163L1Q9NR16 1453 aa20.06■□□□□ 0.8
CACNA1A-249ENST00000637777 GLI3P10071 1580 aa20.06■□□□□ 0.8
CACNA1A-249ENST00000637777 EDC4Q6P2E9 1401 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-249ENST00000637777 HSPA5P11021 654 aaKnown RBP20.05■□□□□ 0.8
CACNA1A-249ENST00000637777 NME9Q86XW9 330 aa20.05■□□□□ 0.8
CACNA1A-249ENST00000637777 SLIT3O75094 1523 aa20.04■□□□□ 0.8
CACNA1A-249ENST00000637777 KCNH5Q8NCM2 988 aa20.04■□□□□ 0.8
CACNA1A-249ENST00000637777 CPDO75976 1380 aa20.03■□□□□ 0.8
CACNA1A-249ENST00000637777 USP35Q9P2H5 1018 aa20.02■□□□□ 0.8
CACNA1A-249ENST00000637777 ZRANB1Q9UGI0 708 aa20.02■□□□□ 0.8
CACNA1A-249ENST00000637777 ANKRD36BQ8N2N9 1353 aa20.02■□□□□ 0.8
CACNA1A-249ENST00000637777 FAM98CQ17RN3 349 aaKnown RBP20.01■□□□□ 0.79
CACNA1A-249ENST00000637777 SEPT12Q8IYM1 358 aa19.99■□□□□ 0.79
CACNA1A-249ENST00000637777 COG3Q96JB2 828 aa19.98■□□□□ 0.79
CACNA1A-249ENST00000637777 SPATA31A5Q5VU36 1347 aa19.98■□□□□ 0.79
CACNA1A-249ENST00000637777 SPATA31A7Q8IWB4 1347 aa19.98■□□□□ 0.79
CACNA1A-249ENST00000637777 MYOM1P52179 1685 aa19.97■□□□□ 0.79
CACNA1A-249ENST00000637777 LMO7Q8WWI1 1683 aa19.97■□□□□ 0.79
CACNA1A-249ENST00000637777 CAMTA1Q9Y6Y1 1673 aa19.97■□□□□ 0.79
CACNA1A-249ENST00000637777 BRWD3Q6RI45 1802 aa19.97■□□□□ 0.79
CACNA1A-249ENST00000637777 USP31Q70CQ4 1352 aa19.96■□□□□ 0.79
CACNA1A-249ENST00000637777 CSB-PGBD3P0DP91 1061 aa19.96■□□□□ 0.79
CACNA1A-249ENST00000637777 LARP1Q6PKG0 1096 aaKnown RBP19.96■□□□□ 0.79
CACNA1A-249ENST00000637777 AATKQ6ZMQ8 1374 aa19.95■□□□□ 0.79
CACNA1A-249ENST00000637777 USP54Q70EL1 1684 aa19.95■□□□□ 0.78
CACNA1A-249ENST00000637777 COL5A2P05997 1499 aaPredicted RBP19.95■□□□□ 0.78
CACNA1A-249ENST00000637777 UPF1Q92900 1129 aaKnown RBP eCLIP19.95■□□□□ 0.78
CACNA1A-249ENST00000637777 NFAT5O94916 1531 aa19.95■□□□□ 0.78
CACNA1A-249ENST00000637777 LTN1O94822 1766 aa19.95■□□□□ 0.78
CACNA1A-249ENST00000637777 RGPD5Q99666 1765 aa19.94■□□□□ 0.78
CACNA1A-249ENST00000637777 TOM1L2Q6ZVM7 507 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms