RNA–Protein interactions for RNA: ENST00000637689.1

LGI1-228, Transcript of leucine rich glioma inactivated 1, humanhuman

TSL 5 BASIC

Gene LGI1, Length 1,802 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1-228ENST00000637689 USP17L5A8MUK1 530 aa6.92□□□□□ -1.3
LGI1-228ENST00000637689 ARID4AP29374 1257 aaPredicted RBP6.92□□□□□ -1.3
LGI1-228ENST00000637689 PSEN2P49810 448 aa6.92□□□□□ -1.3
LGI1-228ENST00000637689 LYPD8Q6UX82 237 aa6.92□□□□□ -1.3
LGI1-228ENST00000637689 ERCC3P19447 782 aa6.91□□□□□ -1.3
LGI1-228ENST00000637689 SLFNL1Q499Z3 407 aa6.91□□□□□ -1.3
LGI1-228ENST00000637689 PLEKHM2Q8IWE5 1019 aa6.91□□□□□ -1.3
LGI1-228ENST00000637689 PRR14Q9BWN1 585 aa6.91□□□□□ -1.3
LGI1-228ENST00000637689 NBPF3Q9H094 633 aa6.91□□□□□ -1.3
LGI1-228ENST00000637689 ZMIZ1Q9ULJ6 1067 aa6.91□□□□□ -1.3
LGI1-228ENST00000637689 ZC3H4Q9UPT8 1303 aaKnown RBP6.9□□□□□ -1.3
LGI1-228ENST00000637689 SHROOM4Q9ULL8 1493 aa6.9□□□□□ -1.3
LGI1-228ENST00000637689 FAM196BA6NMK8 535 aa6.9□□□□□ -1.3
LGI1-228ENST00000637689 PIK3CDO00329 1044 aa6.9□□□□□ -1.3
LGI1-228ENST00000637689 ARHGAP33O14559 1287 aa6.9□□□□□ -1.3
LGI1-228ENST00000637689 SLC4A5Q9BY07 1137 aa6.9□□□□□ -1.3
LGI1-228ENST00000637689 SLC27A5Q9Y2P5 690 aa6.9□□□□□ -1.3
LGI1-228ENST00000637689 RASA1P20936 1047 aa6.9□□□□□ -1.31
LGI1-228ENST00000637689 PUS10Q3MIT2 529 aaKnown RBP6.9□□□□□ -1.31
LGI1-228ENST00000637689 MORN1Q5T089 497 aa6.9□□□□□ -1.31
LGI1-228ENST00000637689 LAPTM4BQ86VI4 370 aa6.9□□□□□ -1.31
LGI1-228ENST00000637689 FAM200AQ8TCP9 573 aa6.9□□□□□ -1.31
LGI1-228ENST00000637689 MKRN1Q9UHC7 482 aaKnown RBP6.9□□□□□ -1.31
LGI1-228ENST00000637689 USP17L15C9J2P7 530 aa6.89□□□□□ -1.31
LGI1-228ENST00000637689 USP17L10C9JJH3 530 aa6.89□□□□□ -1.31
LGI1-228ENST00000637689 USP17L13C9JLJ4 530 aa6.89□□□□□ -1.31
LGI1-228ENST00000637689 USP17L12C9JPN9 530 aa6.89□□□□□ -1.31
LGI1-228ENST00000637689 USP17L11C9JVI0 530 aa6.89□□□□□ -1.31
LGI1-228ENST00000637689 USP17L21D6R901 530 aa6.89□□□□□ -1.31
LGI1-228ENST00000637689 USP17L18D6R9N7 530 aa6.89□□□□□ -1.31
LGI1-228ENST00000637689 USP17L22D6RA61 530 aa6.89□□□□□ -1.31
LGI1-228ENST00000637689 USP17L17D6RBQ6 530 aa6.89□□□□□ -1.31
LGI1-228ENST00000637689 USP17L19D6RCP7 530 aa6.89□□□□□ -1.31
LGI1-228ENST00000637689 USP17L20D6RJB6 530 aa6.89□□□□□ -1.31
LGI1-228ENST00000637689 ATP5J2-PTCD1G3V325 749 aa6.89□□□□□ -1.31
LGI1-228ENST00000637689 USP17L24Q0WX57 530 aa6.89□□□□□ -1.31
LGI1-228ENST00000637689 DEPDC4Q8N2C3 294 aa6.89□□□□□ -1.31
LGI1-228ENST00000637689 USB1Q9BQ65 265 aaKnown RBP6.89□□□□□ -1.31
LGI1-228ENST00000637689 ACTN4O43707 911 aaKnown RBP6.88□□□□□ -1.31
LGI1-228ENST00000637689 IGSF3O75054 1194 aa6.88□□□□□ -1.31
LGI1-228ENST00000637689 TXNDC2Q86VQ3 553 aa6.88□□□□□ -1.31
LGI1-228ENST00000637689 CTHP32929 405 aa6.87□□□□□ -1.31
LGI1-228ENST00000637689 MCCD1P59942 119 aaPredicted RBP6.87□□□□□ -1.31
LGI1-228ENST00000637689 RNF135Q8IUD6 432 aa6.87□□□□□ -1.31
LGI1-228ENST00000637689 LZTS3O60299 673 aaPredicted RBP6.87□□□□□ -1.31
LGI1-228ENST00000637689 PTK2Q05397 1052 aa6.87□□□□□ -1.31
LGI1-228ENST00000637689 LRCH3Q96II8 777 aa6.87□□□□□ -1.31
LGI1-228ENST00000637689 RBM47A0AV96 593 aaKnown RBP6.86□□□□□ -1.31
LGI1-228ENST00000637689 SSFA2P28290 1259 aa6.86□□□□□ -1.31
LGI1-228ENST00000637689 NCOA4Q13772 614 aa6.86□□□□□ -1.31
LGI1-228ENST00000637689 CRTC2Q53ET0 693 aaPredicted RBP6.86□□□□□ -1.31
LGI1-228ENST00000637689 ARMC2Q8NEN0 867 aa6.86□□□□□ -1.31
LGI1-228ENST00000637689 CDCA7Q9BWT1 371 aaPredicted RBP6.86□□□□□ -1.31
LGI1-228ENST00000637689 BIN2Q9UBW5 565 aaPredicted RBP6.86□□□□□ -1.31
LGI1-228ENST00000637689 EML3Q32P44 896 aa6.85□□□□□ -1.31
LGI1-228ENST00000637689 ZFRQ96KR1 1074 aaKnown RBP6.85□□□□□ -1.31
LGI1-228ENST00000637689 USP35Q9P2H5 1018 aa6.85□□□□□ -1.31
LGI1-228ENST00000637689 RBM19Q9Y4C8 960 aaKnown RBP6.85□□□□□ -1.31
LGI1-228ENST00000637689 GPSM3Q9Y4H4 160 aa6.85□□□□□ -1.31
LGI1-228ENST00000637689 PCDHB9Q9Y5E1 797 aa6.85□□□□□ -1.31
LGI1-228ENST00000637689 FMNL1O95466 1100 aaPredicted RBP6.85□□□□□ -1.31
LGI1-228ENST00000637689 ATP2B4P23634 1241 aa6.85□□□□□ -1.31
LGI1-228ENST00000637689 PTK7Q13308 1070 aa6.85□□□□□ -1.31
LGI1-228ENST00000637689 PTPRNQ16849 979 aa6.85□□□□□ -1.31
LGI1-228ENST00000637689 RNF19BQ6ZMZ0 732 aa6.85□□□□□ -1.31
LGI1-228ENST00000637689 TRIM50Q86XT4 487 aa6.85□□□□□ -1.31
LGI1-228ENST00000637689 ANKMY2Q8IV38 441 aa6.85□□□□□ -1.31
LGI1-228ENST00000637689 FAM174AQ8TBP5 190 aa6.85□□□□□ -1.31
LGI1-228ENST00000637689 CLP1Q92989 425 aaKnown RBP6.85□□□□□ -1.31
LGI1-228ENST00000637689 MAP10Q9P2G4 905 aa6.85□□□□□ -1.31
LGI1-228ENST00000637689 CEP126Q9P2H0 1117 aa6.85□□□□□ -1.31
LGI1-228ENST00000637689 LOC105371045A0A1W2PR82 267 aa6.84□□□□□ -1.31
LGI1-228ENST00000637689 PBX2P40425 430 aa6.84□□□□□ -1.31
LGI1-228ENST00000637689 ATP1A2P50993 1020 aa6.84□□□□□ -1.31
LGI1-228ENST00000637689 PHLDB3Q6NSJ2 640 aa6.84□□□□□ -1.31
LGI1-228ENST00000637689 MRPL50Q8N5N7 158 aaKnown RBP6.84□□□□□ -1.31
LGI1-228ENST00000637689 PLPP7Q8NBV4 271 aa6.84□□□□□ -1.31
LGI1-228ENST00000637689 VPS9D1Q9Y2B5 631 aa6.84□□□□□ -1.31
LGI1-228ENST00000637689 SALL2Q9Y467 1007 aaPredicted RBP6.84□□□□□ -1.31
LGI1-228ENST00000637689 ERBB3P21860 1342 aa6.84□□□□□ -1.31
LGI1-228ENST00000637689 SOWAHDA6NJG2 315 aa6.83□□□□□ -1.32
LGI1-228ENST00000637689 F12P00748 615 aaPredicted RBP6.83□□□□□ -1.32
LGI1-228ENST00000637689 JUNDP17535 347 aa6.83□□□□□ -1.32
LGI1-228ENST00000637689 MARSP56192 900 aaKnown RBP6.83□□□□□ -1.32
LGI1-228ENST00000637689 SWI5Q1ZZU3 235 aa6.83□□□□□ -1.32
LGI1-228ENST00000637689 MAP7D1Q3KQU3 841 aa6.83□□□□□ -1.32
LGI1-228ENST00000637689 NBPF14Q5TI25 921 aa6.83□□□□□ -1.32
LGI1-228ENST00000637689 BLOC1S3Q6QNY0 202 aa6.83□□□□□ -1.32
LGI1-228ENST00000637689 GPKOWQ92917 476 aaPredicted RBP eCLIP6.83□□□□□ -1.32
LGI1-228ENST00000637689 RNF166Q96A37 237 aaPredicted RBP6.83□□□□□ -1.32
LGI1-228ENST00000637689 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.83□□□□□ -1.32
LGI1-228ENST00000637689 NR1I2O75469 434 aa6.83□□□□□ -1.32
LGI1-228ENST00000637689 EMP3P54852 163 aa6.83□□□□□ -1.32
LGI1-228ENST00000637689 DMRTA1Q5VZB9 504 aa6.83□□□□□ -1.32
LGI1-228ENST00000637689 BCL2L13Q9BXK5 485 aa6.83□□□□□ -1.32
LGI1-228ENST00000637689 AXIN2Q9Y2T1 843 aa6.83□□□□□ -1.32
LGI1-228ENST00000637689 UNCXA6NJT0 531 aa6.82□□□□□ -1.32
LGI1-228ENST00000637689 VARS2Q5ST30 1063 aaKnown RBP6.82□□□□□ -1.32
LGI1-228ENST00000637689 PDXDC2PQ6P474 469 aa6.82□□□□□ -1.32
LGI1-228ENST00000637689 BRICD5Q6PL45 260 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms