RNA–Protein interactions for RNA: ENST00000636616.1

EFHC1-223, Transcript of EF-hand domain containing 1, human

TSL 5

Gene EFHC1, Length 1,636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFHC1-223	ENST00000636616	SNRK	Q9NRH2	765 aa		8.02	□□□□□ -1.13
EFHC1-223	ENST00000636616	GFRA3	O60609	400 aa		8.01	□□□□□ -1.13
EFHC1-223	ENST00000636616	USP17L8	P0C7I0	530 aa		8.01	□□□□□ -1.13
EFHC1-223	ENST00000636616	JUND	P17535	347 aa		8.01	□□□□□ -1.13
EFHC1-223	ENST00000636616	MFAP1	P55081	439 aa	Known RBP	8.01	□□□□□ -1.13
EFHC1-223	ENST00000636616	FNBP4	Q8N3X1	1017 aa	Predicted RBP	8.01	□□□□□ -1.13
EFHC1-223	ENST00000636616	FOXD4L5	Q5VV16	416 aa	Predicted RBP	8	□□□□□ -1.13
EFHC1-223	ENST00000636616	PROSER2	Q86WR7	435 aa	Predicted RBP	8	□□□□□ -1.13
EFHC1-223	ENST00000636616	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	8	□□□□□ -1.13
EFHC1-223	ENST00000636616	PRDM9	Q9NQV7	894 aa		8	□□□□□ -1.13
EFHC1-223	ENST00000636616	SERPINA10	Q9UK55	444 aa		8	□□□□□ -1.13
EFHC1-223	ENST00000636616	RB1CC1	Q8TDY2	1594 aa		8	□□□□□ -1.13
EFHC1-223	ENST00000636616	SHROOM4	Q9ULL8	1493 aa		8	□□□□□ -1.13
EFHC1-223	ENST00000636616	MMP16	P51512	607 aa		8	□□□□□ -1.13
EFHC1-223	ENST00000636616	LYPD8	Q6UX82	237 aa		8	□□□□□ -1.13
EFHC1-223	ENST00000636616	RETREG2	Q8NC44	543 aa		8	□□□□□ -1.13
EFHC1-223	ENST00000636616	SLC6A16	Q9GZN6	736 aa		8	□□□□□ -1.13
EFHC1-223	ENST00000636616	GZF1	Q9H116	711 aa	Predicted RBP	8	□□□□□ -1.13
EFHC1-223	ENST00000636616	PER1	O15534	1290 aa	Predicted RBP	7.99	□□□□□ -1.13
EFHC1-223	ENST00000636616	DXO	O77932	396 aa	Known RBP	7.99	□□□□□ -1.13
EFHC1-223	ENST00000636616	CCDC97	Q96F63	343 aa	Predicted RBP	7.99	□□□□□ -1.13
EFHC1-223	ENST00000636616	IRF5	Q13568	498 aa		7.98	□□□□□ -1.13
EFHC1-223	ENST00000636616	MTMR14	Q8NCE2	650 aa		7.98	□□□□□ -1.13
EFHC1-223	ENST00000636616	LRRN4	Q8WUT4	740 aa		7.98	□□□□□ -1.13
EFHC1-223	ENST00000636616	S1PR4	O95977	384 aa		7.97	□□□□□ -1.13
EFHC1-223	ENST00000636616	RBM25	P49756	843 aa	Known RBP	7.97	□□□□□ -1.13
EFHC1-223	ENST00000636616	POM121	Q96HA1	1249 aa		7.97	□□□□□ -1.13
EFHC1-223	ENST00000636616	SOCS7	O14512	581 aa		7.96	□□□□□ -1.13
EFHC1-223	ENST00000636616	PTPRN	Q16849	979 aa		7.96	□□□□□ -1.13
EFHC1-223	ENST00000636616	HMX1	Q9NP08	348 aa	Predicted RBP	7.96	□□□□□ -1.14
EFHC1-223	ENST00000636616	STK17A	Q9UEE5	414 aa		7.95	□□□□□ -1.14
EFHC1-223	ENST00000636616	GJD4	Q96KN9	370 aa	Predicted RBP	7.94	□□□□□ -1.14
EFHC1-223	ENST00000636616	NUDT12	Q9BQG2	462 aa		7.94	□□□□□ -1.14
EFHC1-223	ENST00000636616	F12	P00748	615 aa	Predicted RBP	7.93	□□□□□ -1.14
EFHC1-223	ENST00000636616	CCNYL3	P0C7X3	344 aa		7.93	□□□□□ -1.14
EFHC1-223	ENST00000636616	TRIM34	Q9BYJ4	488 aa		7.93	□□□□□ -1.14
EFHC1-223	ENST00000636616	EVA1B	Q9NVM1	165 aa		7.93	□□□□□ -1.14
EFHC1-223	ENST00000636616	NRG2	O14511	850 aa	Predicted RBP	7.92	□□□□□ -1.14
EFHC1-223	ENST00000636616	PPEF1	O14829	653 aa	Predicted RBP	7.92	□□□□□ -1.14
EFHC1-223	ENST00000636616	NR6A1	Q15406	480 aa		7.92	□□□□□ -1.14
EFHC1-223	ENST00000636616	EPS8L1	Q8TE68	723 aa		7.92	□□□□□ -1.14
EFHC1-223	ENST00000636616	GGCX	P38435	758 aa		7.92	□□□□□ -1.14
EFHC1-223	ENST00000636616	KCNH2	Q12809	1159 aa		7.92	□□□□□ -1.14
EFHC1-223	ENST00000636616	PPP1R18	Q6NYC8	613 aa		7.92	□□□□□ -1.14
EFHC1-223	ENST00000636616	MAP10	Q9P2G4	905 aa		7.92	□□□□□ -1.14
EFHC1-223	ENST00000636616	FCF1	Q9Y324	198 aa	Known RBP	7.92	□□□□□ -1.14
EFHC1-223	ENST00000636616	RNF223	E7ERA6	249 aa		7.91	□□□□□ -1.14
EFHC1-223	ENST00000636616	CTH	P32929	405 aa		7.91	□□□□□ -1.14
EFHC1-223	ENST00000636616	CCDC24	Q8N4L8	307 aa		7.91	□□□□□ -1.14
EFHC1-223	ENST00000636616	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	7.91	□□□□□ -1.14
EFHC1-223	ENST00000636616	COG6	Q9Y2V7	657 aa		7.91	□□□□□ -1.14
EFHC1-223	ENST00000636616	PRM3	Q9NNZ6	103 aa		7.9	□□□□□ -1.14
EFHC1-223	ENST00000636616	PTCRA	Q6ISU1	281 aa	Predicted RBP	7.89	□□□□□ -1.15
EFHC1-223	ENST00000636616	ANKLE1	Q8NAG6	615 aa		7.89	□□□□□ -1.15
EFHC1-223	ENST00000636616	GDPD2	Q9HCC8	539 aa		7.89	□□□□□ -1.15
EFHC1-223	ENST00000636616	NDUFB9	Q9Y6M9	179 aa		7.89	□□□□□ -1.15
EFHC1-223	ENST00000636616	TBC1D2B	Q9UPU7	963 aa		7.89	□□□□□ -1.15
EFHC1-223	ENST00000636616		E9PSI1	815 aa		7.86	□□□□□ -1.15
EFHC1-223	ENST00000636616	PLA2G2C	Q5R387	149 aa		7.86	□□□□□ -1.15
EFHC1-223	ENST00000636616	UNC93B1	Q9H1C4	597 aa		7.86	□□□□□ -1.15
EFHC1-223	ENST00000636616	GPR37L1	O60883	481 aa		7.85	□□□□□ -1.15
EFHC1-223	ENST00000636616	ABL2	P42684	1182 aa		7.85	□□□□□ -1.15
EFHC1-223	ENST00000636616	PNMA1	Q8ND90	353 aa		7.85	□□□□□ -1.15
EFHC1-223	ENST00000636616	ARMC2	Q8NEN0	867 aa		7.85	□□□□□ -1.15
EFHC1-223	ENST00000636616	FKBPL	Q9UIM3	349 aa		7.85	□□□□□ -1.15
EFHC1-223	ENST00000636616	ZBTB24	O43167	697 aa	Predicted RBP	7.83	□□□□□ -1.16
EFHC1-223	ENST00000636616	TREML4	Q6UXN2	200 aa		7.83	□□□□□ -1.16
EFHC1-223	ENST00000636616	ZC3H4	Q9UPT8	1303 aa	Known RBP	7.83	□□□□□ -1.16
EFHC1-223	ENST00000636616	PPP1R15A	O75807	674 aa	Predicted RBP	7.82	□□□□□ -1.16
EFHC1-223	ENST00000636616	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	7.82	□□□□□ -1.16
EFHC1-223	ENST00000636616	RPIA	P49247	311 aa		7.81	□□□□□ -1.16
EFHC1-223	ENST00000636616	SUZ12	Q15022	739 aa	Known RBP	7.81	□□□□□ -1.16
EFHC1-223	ENST00000636616	BAP1	Q92560	729 aa		7.81	□□□□□ -1.16
EFHC1-223	ENST00000636616	ZNF330	Q9Y3S2	320 aa	Predicted RBP	7.81	□□□□□ -1.16
EFHC1-223	ENST00000636616	NBPF14	Q5TI25	921 aa		7.81	□□□□□ -1.16
EFHC1-223	ENST00000636616	PDXDC2P	Q6P474	469 aa		7.81	□□□□□ -1.16
EFHC1-223	ENST00000636616	LIAT1	Q6ZQX7	453 aa		7.81	□□□□□ -1.16
EFHC1-223	ENST00000636616	WWC1	Q8IX03	1113 aa		7.81	□□□□□ -1.16
EFHC1-223	ENST00000636616	EMID1	Q96A84	441 aa	Predicted RBP	7.81	□□□□□ -1.16
EFHC1-223	ENST00000636616	TRIM32	Q13049	653 aa		7.8	□□□□□ -1.16
EFHC1-223	ENST00000636616	LINC01559	Q495D7	138 aa		7.8	□□□□□ -1.16
EFHC1-223	ENST00000636616	WASHC4	Q2M389	1173 aa		7.78	□□□□□ -1.16
EFHC1-223	ENST00000636616	ZNF511	Q8NB15	262 aa		7.78	□□□□□ -1.16
EFHC1-223	ENST00000636616	GPSM3	Q9Y4H4	160 aa		7.78	□□□□□ -1.16
EFHC1-223	ENST00000636616	ZBBX	A8MT70	800 aa		7.78	□□□□□ -1.16
EFHC1-223	ENST00000636616	CD2BP2	O95400	341 aa	Known RBP	7.78	□□□□□ -1.16
EFHC1-223	ENST00000636616	SLC19A1	P41440	591 aa		7.78	□□□□□ -1.16
EFHC1-223	ENST00000636616	SH3BP2	P78314	561 aa		7.78	□□□□□ -1.16
EFHC1-223	ENST00000636616	PTK2	Q05397	1052 aa		7.78	□□□□□ -1.16
EFHC1-223	ENST00000636616	LCE2A	Q5TA79	106 aa	Predicted RBP	7.78	□□□□□ -1.16
EFHC1-223	ENST00000636616	SH3BP5L	Q7L8J4	393 aa		7.78	□□□□□ -1.16
EFHC1-223	ENST00000636616	PATL2	C9JE40	543 aa	Known RBP	7.77	□□□□□ -1.17
EFHC1-223	ENST00000636616	HMGB1	P09429	215 aa	Known RBP	7.77	□□□□□ -1.17
EFHC1-223	ENST00000636616	FBXO45	P0C2W1	286 aa		7.77	□□□□□ -1.17
EFHC1-223	ENST00000636616	HSP90B1	P14625	803 aa	Known RBP	7.77	□□□□□ -1.17
EFHC1-223	ENST00000636616	VAC14	Q08AM6	782 aa		7.77	□□□□□ -1.17
EFHC1-223	ENST00000636616	KCNA1	Q09470	495 aa		7.77	□□□□□ -1.17
EFHC1-223	ENST00000636616	NR1H3	Q13133	447 aa		7.77	□□□□□ -1.17
EFHC1-223	ENST00000636616	FOXJ1	Q92949	421 aa		7.77	□□□□□ -1.17
EFHC1-223	ENST00000636616	OCSTAMP	Q9BR26	566 aa		7.77	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms